Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_10460 and PS417_10465 overlap by 1 nucleotides PS417_10465 and PS417_10470 are separated by 110 nucleotides
PS417_10460: PS417_10460 - selenide, water dikinase, at 2,233,412 to 2,234,446
_10460
PS417_10465: PS417_10465 - tRNA 2-selenouridine synthase, at 2,234,446 to 2,235,540
_10465
PS417_10470: PS417_10470 - membrane protein, at 2,235,651 to 2,236,706
_10470
Position (kb)
2234
2235
2236 Strain fitness (log2 ratio)
-2
-1
0
1 at 2233.482 kb on + strand at 2233.482 kb on + strand at 2233.482 kb on + strand at 2233.685 kb on + strand, within PS417_10460 at 2233.685 kb on + strand, within PS417_10460 at 2233.685 kb on + strand, within PS417_10460 at 2233.685 kb on + strand, within PS417_10460 at 2233.685 kb on + strand, within PS417_10460 at 2233.685 kb on + strand, within PS417_10460 at 2233.686 kb on - strand, within PS417_10460 at 2233.686 kb on - strand, within PS417_10460 at 2233.686 kb on - strand, within PS417_10460 at 2233.686 kb on - strand, within PS417_10460 at 2233.686 kb on - strand, within PS417_10460 at 2233.892 kb on - strand, within PS417_10460 at 2233.931 kb on + strand, within PS417_10460 at 2233.931 kb on + strand, within PS417_10460 at 2233.931 kb on + strand, within PS417_10460 at 2234.029 kb on + strand, within PS417_10460 at 2234.198 kb on + strand, within PS417_10460 at 2234.199 kb on - strand, within PS417_10460 at 2234.199 kb on - strand, within PS417_10460 at 2234.215 kb on + strand, within PS417_10460 at 2234.216 kb on - strand, within PS417_10460 at 2234.249 kb on + strand, within PS417_10460 at 2234.285 kb on - strand, within PS417_10460 at 2234.434 kb on - strand at 2234.602 kb on + strand, within PS417_10465 at 2234.603 kb on - strand, within PS417_10465 at 2234.817 kb on + strand, within PS417_10465 at 2235.151 kb on + strand, within PS417_10465 at 2235.211 kb on + strand, within PS417_10465 at 2235.211 kb on + strand, within PS417_10465 at 2235.211 kb on + strand, within PS417_10465 at 2235.246 kb on - strand, within PS417_10465 at 2235.304 kb on - strand, within PS417_10465 at 2235.434 kb on - strand at 2235.436 kb on + strand at 2235.437 kb on - strand at 2235.448 kb on + strand at 2235.845 kb on + strand, within PS417_10470 at 2235.849 kb on + strand, within PS417_10470 at 2235.849 kb on + strand, within PS417_10470 at 2236.179 kb on + strand, within PS417_10470 at 2236.371 kb on - strand, within PS417_10470 at 2236.486 kb on + strand, within PS417_10470 at 2236.499 kb on - strand, within PS417_10470
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 2,233,482 + -0.1 2,233,482 + +0.8 2,233,482 + +0.6 2,233,685 + PS417_10460 0.26 -0.3 2,233,685 + PS417_10460 0.26 -0.2 2,233,685 + PS417_10460 0.26 -0.0 2,233,685 + PS417_10460 0.26 +0.1 2,233,685 + PS417_10460 0.26 -1.4 2,233,685 + PS417_10460 0.26 -0.2 2,233,686 - PS417_10460 0.26 +0.0 2,233,686 - PS417_10460 0.26 +0.6 2,233,686 - PS417_10460 0.26 +1.5 2,233,686 - PS417_10460 0.26 +0.2 2,233,686 - PS417_10460 0.26 -0.6 2,233,892 - PS417_10460 0.46 -0.2 2,233,931 + PS417_10460 0.50 -0.0 2,233,931 + PS417_10460 0.50 -0.8 2,233,931 + PS417_10460 0.50 -0.4 2,234,029 + PS417_10460 0.60 -2.3 2,234,198 + PS417_10460 0.76 -0.4 2,234,199 - PS417_10460 0.76 -0.7 2,234,199 - PS417_10460 0.76 -0.2 2,234,215 + PS417_10460 0.78 -0.3 2,234,216 - PS417_10460 0.78 +0.4 2,234,249 + PS417_10460 0.81 -0.1 2,234,285 - PS417_10460 0.84 +0.7 2,234,434 - -0.1 2,234,602 + PS417_10465 0.14 +0.6 2,234,603 - PS417_10465 0.14 +0.9 2,234,817 + PS417_10465 0.34 +0.2 2,235,151 + PS417_10465 0.64 +1.0 2,235,211 + PS417_10465 0.70 +0.7 2,235,211 + PS417_10465 0.70 +0.9 2,235,211 + PS417_10465 0.70 +0.1 2,235,246 - PS417_10465 0.73 +0.0 2,235,304 - PS417_10465 0.78 -0.0 2,235,434 - +0.2 2,235,436 + +0.0 2,235,437 - -0.6 2,235,448 + +0.4 2,235,845 + PS417_10470 0.18 +0.9 2,235,849 + PS417_10470 0.19 +0.5 2,235,849 + PS417_10470 0.19 +0.1 2,236,179 + PS417_10470 0.50 +0.1 2,236,371 - PS417_10470 0.68 -1.8 2,236,486 + PS417_10470 0.79 +0.1 2,236,499 - PS417_10470 0.80 +0.1
Or see this region's nucleotide sequence