Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4914

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
5,490,862	+		PfGW456L13_4913	0.46	+1.1
5,490,863	-		PfGW456L13_4913	0.46	-0.8
5,490,895	+		PfGW456L13_4913	0.48	+0.9
5,490,895	+		PfGW456L13_4913	0.48	-0.1
5,490,895	+		PfGW456L13_4913	0.48	-0.2
5,490,896	-		PfGW456L13_4913	0.48	+0.8
5,490,896	-		PfGW456L13_4913	0.48	+0.0
5,490,896	-		PfGW456L13_4913	0.48	+0.8
5,490,896	-		PfGW456L13_4913	0.48	+0.2
5,491,358	+		PfGW456L13_4913	0.74	-0.4
5,491,358	+		PfGW456L13_4913	0.74	-0.1
5,491,795	+				+0.6
5,491,796	-				-0.1
5,491,825	-				-0.1
5,492,152	+		PfGW456L13_4914	0.58	-0.6
5,492,152	+		PfGW456L13_4914	0.58	+0.4
5,492,153	-		PfGW456L13_4914	0.58	-1.3
5,492,153	-		PfGW456L13_4914	0.58	-0.1
5,492,153	-		PfGW456L13_4914	0.58	-1.1
5,492,343	+				+0.5
5,492,365	+				+0.4
5,492,365	+				-0.9
5,492,365	+				+0.3
5,492,365	+				-0.1
5,492,365	+				+0.2
5,492,365	+				+0.4
5,492,365	+				-1.5
5,492,366	-				+0.9
5,492,366	-				-0.2
5,492,366	-				-0.3
5,492,366	-				+0.3
5,492,366	-				-0.1
5,492,400	+				+0.0
5,492,400	+				-1.0
5,492,400	+				-0.7
5,492,401	-				+0.1
5,492,401	-				+0.5
5,492,401	-				+0.6
5,492,401	-				-1.2
5,492,413	-				+1.2
5,492,413	-				-0.4
5,492,413	-				-0.0
5,492,449	-		PfGW456L13_4915	0.22	-0.2
5,492,463	-		PfGW456L13_4915	0.28	-0.1
5,492,494	+		PfGW456L13_4915	0.40	-0.6
5,492,494	+		PfGW456L13_4915	0.40	+0.6
5,492,495	-		PfGW456L13_4915	0.41	+0.3
5,492,495	-		PfGW456L13_4915	0.41	-0.2
5,492,495	-		PfGW456L13_4915	0.41	-1.1
5,492,495	-		PfGW456L13_4915	0.41	+0.3
5,492,495	-		PfGW456L13_4915	0.41	+0.1
5,492,495	-		PfGW456L13_4915	0.41	+0.8
5,492,495	-		PfGW456L13_4915	0.41	-0.3
5,492,666	+				+2.7
5,492,667	-				+0.1
5,492,667	-				+0.7
5,492,706	-				-0.2
5,492,706	-				-0.7
5,492,711	+				+0.5
5,492,712	-				+1.1
5,492,970	+		PfGW456L13_4916	0.42	-1.2
5,492,970	+		PfGW456L13_4916	0.42	-0.8
5,492,971	-		PfGW456L13_4916	0.42	-0.3
5,492,971	-		PfGW456L13_4916	0.42	+0.3
5,493,171	+		PfGW456L13_4916	0.70	+0.2
5,493,171	+		PfGW456L13_4916	0.70	-0.7
5,493,172	-		PfGW456L13_4916	0.70	+0.8
5,493,172	-		PfGW456L13_4916	0.70	+0.3
5,493,172	-		PfGW456L13_4916	0.70	+0.7