Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3691

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
4,154,066	-		PfGW456L13_3690	0.76	-0.5
4,154,110	-		PfGW456L13_3690	0.79	-1.1
4,154,224	+		PfGW456L13_3690	0.88	+1.1
4,154,224	+		PfGW456L13_3690	0.88	+0.7
4,154,225	-		PfGW456L13_3690	0.88	-0.8
4,154,225	-		PfGW456L13_3690	0.88	+0.1
4,154,429	+				-0.8
4,154,429	+				-0.0
4,154,429	+				+0.2
4,154,435	+				+0.1
4,154,435	+				+0.3
4,154,435	+				+0.1
4,154,553	-				-0.2
4,154,553	-				-0.2
4,154,558	-				+1.0
4,154,558	-				+1.0
4,154,610	+				+1.1
4,155,083	-		PfGW456L13_3691	0.35	+0.4
4,155,217	+		PfGW456L13_3691	0.44	+0.9
4,155,217	+		PfGW456L13_3691	0.44	+0.7
4,155,217	+		PfGW456L13_3691	0.44	-0.4
4,155,217	+		PfGW456L13_3691	0.44	-1.0
4,155,218	-		PfGW456L13_3691	0.44	-0.6
4,155,218	-		PfGW456L13_3691	0.44	-0.6
4,155,218	-				+2.3
4,155,218	-		PfGW456L13_3691	0.44	+1.4
4,155,218	-		PfGW456L13_3691	0.44	+1.4
4,155,229	+		PfGW456L13_3691	0.45	+0.7
4,155,229	+		PfGW456L13_3691	0.45	+0.9
4,155,229	+		PfGW456L13_3691	0.45	+0.9
4,155,229	+		PfGW456L13_3691	0.45	+1.0
4,155,229	+		PfGW456L13_3691	0.45	+1.3
4,155,229	+		PfGW456L13_3691	0.45	+0.3
4,155,229	+		PfGW456L13_3691	0.45	-0.5
4,155,229	+		PfGW456L13_3691	0.45	+0.2
4,155,229	+		PfGW456L13_3691	0.45	+0.4
4,155,229	+		PfGW456L13_3691	0.45	+0.1
4,155,230	-		PfGW456L13_3691	0.45	+0.1
4,155,230	-		PfGW456L13_3691	0.45	-1.3
4,155,230	-		PfGW456L13_3691	0.45	-0.2
4,155,230	-		PfGW456L13_3691	0.45	-0.1
4,155,230	-		PfGW456L13_3691	0.45	+0.2
4,155,230	-		PfGW456L13_3691	0.45	-0.5
4,155,230	-		PfGW456L13_3691	0.45	-0.2
4,155,230	-		PfGW456L13_3691	0.45	-0.4
4,155,230	-		PfGW456L13_3691	0.45	-1.8
4,155,230	-		PfGW456L13_3691	0.45	+0.0
4,155,230	-		PfGW456L13_3691	0.45	+0.2
4,155,230	-				-0.3
4,155,230	-		PfGW456L13_3691	0.45	+0.2
4,155,232	-		PfGW456L13_3691	0.45	-0.2
4,155,232	-		PfGW456L13_3691	0.45	-0.5
4,155,247	+		PfGW456L13_3691	0.46	-0.1
4,155,248	-		PfGW456L13_3691	0.46	+0.3
4,155,283	+		PfGW456L13_3691	0.48	+0.0
4,155,284	-		PfGW456L13_3691	0.48	-0.4
4,155,284	-		PfGW456L13_3691	0.48	+0.4
4,155,286	+		PfGW456L13_3691	0.48	-0.2
4,155,287	-		PfGW456L13_3691	0.48	+0.5
4,155,304	+		PfGW456L13_3691	0.49	+1.2
4,155,304	+		PfGW456L13_3691	0.49	-0.0
4,155,304	+		PfGW456L13_3691	0.49	+1.1
4,155,305	-		PfGW456L13_3691	0.49	-0.4
4,155,305	-		PfGW456L13_3691	0.49	+0.1
4,155,305	-		PfGW456L13_3691	0.49	-1.8
4,155,307	+		PfGW456L13_3691	0.50	+0.7
4,155,424	+		PfGW456L13_3691	0.57	+0.2
4,155,425	-		PfGW456L13_3691	0.57	+0.9
4,155,490	-		PfGW456L13_3691	0.61	+1.7
4,155,568	+		PfGW456L13_3691	0.66	+0.1
4,155,568	+		PfGW456L13_3691	0.66	+0.3
4,155,885	+		PfGW456L13_3691	0.87	-0.1
4,155,886	-		PfGW456L13_3691	0.87	+1.3
4,156,293	+		PfGW456L13_3692	0.15	-0.2
4,156,293	+		PfGW456L13_3692	0.15	+0.3
4,156,293	+		PfGW456L13_3692	0.15	-0.6
4,156,293	+		PfGW456L13_3692	0.15	+0.7
4,156,293	+		PfGW456L13_3692	0.15	-0.0
4,156,293	+		PfGW456L13_3692	0.15	-0.2
4,156,293	+		PfGW456L13_3692	0.15	-0.8
4,156,293	+		PfGW456L13_3692	0.15	-0.1
4,156,293	+		PfGW456L13_3692	0.15	+2.3
4,156,293	+		PfGW456L13_3692	0.15	-0.1
4,156,293	+		PfGW456L13_3692	0.15	-0.0
4,156,293	+		PfGW456L13_3692	0.15	-0.3
4,156,293	+		PfGW456L13_3692	0.15	-1.2
4,156,294	-		PfGW456L13_3692	0.15	-0.3
4,156,294	-		PfGW456L13_3692	0.15	+0.2
4,156,294	-		PfGW456L13_3692	0.15	-1.3
4,156,294	-		PfGW456L13_3692	0.15	+0.4
4,156,294	-		PfGW456L13_3692	0.15	-0.8
4,156,294	-		PfGW456L13_3692	0.15	+0.3
4,156,294	-		PfGW456L13_3692	0.15	+0.8
4,156,294	-		PfGW456L13_3692	0.15	+0.4
4,156,294	-		PfGW456L13_3692	0.15	-0.1
4,156,294	-		PfGW456L13_3692	0.15	+0.3
4,156,294	-		PfGW456L13_3692	0.15	-0.6
4,156,294	-		PfGW456L13_3692	0.15	-0.3
4,156,427	+		PfGW456L13_3692	0.31	-0.2
4,156,436	+		PfGW456L13_3692	0.32	-0.2
4,156,436	+		PfGW456L13_3692	0.32	-0.6
4,156,436	+		PfGW456L13_3692	0.32	+0.8
4,156,437	-		PfGW456L13_3692	0.32	+1.3
4,156,546	-		PfGW456L13_3692	0.45	-0.1
4,156,566	+		PfGW456L13_3692	0.48	+0.7
4,156,566	+		PfGW456L13_3692	0.48	-0.7
4,156,566	+		PfGW456L13_3692	0.48	-0.5
4,156,566	+		PfGW456L13_3692	0.48	+0.1
4,156,566	+		PfGW456L13_3692	0.48	+0.9
4,156,567	-		PfGW456L13_3692	0.48	-0.2
4,156,567	-		PfGW456L13_3692	0.48	-0.2
4,156,567	-		PfGW456L13_3692	0.48	+0.2
4,156,650	+		PfGW456L13_3692	0.58	+0.4
4,156,785	+		PfGW456L13_3692	0.74	-0.1
4,156,791	+		PfGW456L13_3692	0.75	+0.7
4,156,791	+		PfGW456L13_3692	0.75	-0.3
4,156,792	-		PfGW456L13_3692	0.75	-0.3
4,156,792	-		PfGW456L13_3692	0.75	-0.8
4,156,848	+		PfGW456L13_3692	0.82	-0.8
4,156,848	+		PfGW456L13_3692	0.82	+0.5
4,156,848	+		PfGW456L13_3692	0.82	-0.1
4,156,849	-		PfGW456L13_3692	0.82	-0.2
4,156,849	-		PfGW456L13_3692	0.82	-2.1
4,156,897	+		PfGW456L13_3692	0.88	+0.6
4,156,897	+		PfGW456L13_3692	0.88	-0.6
4,156,898	-		PfGW456L13_3692	0.88	+0.7
4,156,999	-				+0.1
4,157,015	+				-0.1
4,157,015	+				+0.4
4,157,015	+				-0.2
4,157,015	+				+0.4
4,157,016	-				-0.0
4,157,016	-				+0.3
4,157,016	-				-0.0
4,157,044	+				-0.1
4,157,044	+				-0.5
4,157,044	+				-0.1