Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3653

Experiment: nitrite 5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrite 5 mM
4,112,475	-		PfGW456L13_3652	0.54	+1.3
4,112,475	-		PfGW456L13_3652	0.54	+0.3
4,112,485	+		PfGW456L13_3652	0.54	+0.1
4,112,486	-		PfGW456L13_3652	0.54	-0.1
4,112,494	+		PfGW456L13_3652	0.55	+0.4
4,112,494	+		PfGW456L13_3652	0.55	-0.3
4,112,495	-		PfGW456L13_3652	0.55	-0.1
4,112,555	+				-0.9
4,112,555	+		PfGW456L13_3652	0.59	+0.3
4,112,556	-		PfGW456L13_3652	0.59	+0.5
4,112,716	+		PfGW456L13_3652	0.70	-0.7
4,112,716	+		PfGW456L13_3652	0.70	-0.9
4,112,717	-		PfGW456L13_3652	0.70	-0.9
4,112,733	+		PfGW456L13_3652	0.71	-1.7
4,112,734	-		PfGW456L13_3652	0.72	-0.1
4,112,734	-		PfGW456L13_3652	0.72	+0.2
4,112,734	-		PfGW456L13_3652	0.72	+0.3
4,112,734	-		PfGW456L13_3652	0.72	+0.3
4,112,768	+		PfGW456L13_3652	0.74	+0.6
4,112,768	+		PfGW456L13_3652	0.74	+0.0
4,112,769	-		PfGW456L13_3652	0.74	+0.4
4,112,769	-		PfGW456L13_3652	0.74	+1.9
4,112,769	-		PfGW456L13_3652	0.74	+0.2
4,112,795	-		PfGW456L13_3652	0.76	+0.6
4,112,858	+		PfGW456L13_3652	0.80	-0.9
4,112,870	+		PfGW456L13_3652	0.81	-0.2
4,112,874	+		PfGW456L13_3652	0.81	+0.9
4,112,874	+		PfGW456L13_3652	0.81	-1.1
4,112,874	+		PfGW456L13_3652	0.81	-1.3
4,112,874	+		PfGW456L13_3652	0.81	+1.8
4,112,874	+				+2.3
4,112,874	+		PfGW456L13_3652	0.81	+0.5
4,112,875	-		PfGW456L13_3652	0.81	-1.3
4,112,875	-		PfGW456L13_3652	0.81	-1.0
4,112,875	-		PfGW456L13_3652	0.81	-0.1
4,112,875	-		PfGW456L13_3652	0.81	-1.5
4,112,875	-		PfGW456L13_3652	0.81	+0.2
4,112,917	+		PfGW456L13_3652	0.84	-0.3
4,112,918	-		PfGW456L13_3652	0.84	-1.9
4,112,963	+		PfGW456L13_3652	0.87	+0.4
4,112,963	+		PfGW456L13_3652	0.87	-0.3
4,112,963	+		PfGW456L13_3652	0.87	-0.0
4,112,963	+		PfGW456L13_3652	0.87	-0.7
4,112,964	-		PfGW456L13_3652	0.87	+0.5
4,112,964	-		PfGW456L13_3652	0.87	+0.4
4,112,964	-		PfGW456L13_3652	0.87	-1.8
4,112,964	-		PfGW456L13_3652	0.87	+0.8
4,112,986	+		PfGW456L13_3652	0.89	+0.3
4,112,987	-		PfGW456L13_3652	0.89	-0.2
4,113,039	+				+1.3
4,113,040	-				+1.2
4,113,064	+				-1.2
4,113,064	+				+0.7
4,113,064	+				+0.8
4,113,064	+				-1.2
4,113,064	+				+0.2
4,113,064	+				+0.7
4,113,064	+				+1.1
4,113,064	+				+2.7
4,113,064	+				-0.4
4,113,065	-				-1.1
4,113,065	-				+0.3
4,113,065	-				+0.5
4,113,065	-				-0.5
4,113,065	-				+0.1
4,113,065	-				-0.0
4,113,068	+				+0.7
4,113,068	+				+0.3
4,113,068	+				+0.7
4,113,119	+				+0.0
4,113,119	+				-0.0
4,113,120	-				+0.1
4,113,120	-				+0.1
4,113,139	+				-1.0
4,113,140	-				+0.2
4,113,145	+				+0.4
4,113,145	+				+0.4
4,113,145	+				+0.1
4,113,145	+				-0.9
4,113,145	+				+0.4
4,113,145	+				+0.4
4,113,145	+				+0.9
4,113,146	-				-0.0
4,113,146	-				+0.8
4,113,146	-				-0.5
4,113,146	-				-0.7
4,113,146	-				-0.4
4,113,147	+				-0.0
4,113,147	+				-0.9
4,113,147	+				+1.3
4,113,147	+				-0.5
4,113,147	+				-0.9
4,113,147	+				-2.5
4,113,147	+				+0.0
4,113,147	+				+0.1
4,113,147	+				+0.3
4,113,147	+				+1.9
4,113,148	-				+0.2
4,113,148	-				-1.1
4,113,148	-				-0.6
4,113,148	-				+0.0
4,113,148	-				+0.3
4,113,159	+				-0.6
4,113,159	+				-1.0
4,113,204	-				+0.1
4,113,204	-				+0.5
4,113,204	-				+0.1
4,113,238	-				-0.0
4,113,238	-				+0.1
4,113,284	+				+0.3
4,113,285	-				+1.2
4,113,310	+				+0.0
4,113,310	+				-0.4
4,113,310	+				+0.2
4,113,310	+				-0.3
4,113,310	+				-1.0
4,113,310	+				-0.4
4,113,311	-				-0.9
4,113,311	-				-0.1
4,113,311	-				-1.2
4,113,311	-				-0.6
4,113,311	-				-0.6
4,113,311	-				+0.0
4,113,350	+				-0.1
4,113,351	-				+0.9
4,113,368	+				-0.1
4,113,368	+				+0.7
4,113,368	+				+0.5
4,113,369	-				-0.1
4,113,369	-				+0.3
4,113,369	-				+0.4
4,113,369	-				+0.4
4,113,478	+		PfGW456L13_3653	0.12	+0.1
4,113,478	+		PfGW456L13_3653	0.12	-0.1
4,113,478	+		PfGW456L13_3653	0.12	-0.5
4,113,478	+		PfGW456L13_3653	0.12	-0.8
4,113,478	+		PfGW456L13_3653	0.12	-1.4
4,113,479	-		PfGW456L13_3653	0.12	+0.5
4,113,499	+		PfGW456L13_3653	0.16	+0.0
4,113,499	+		PfGW456L13_3653	0.16	+0.7
4,113,520	+		PfGW456L13_3653	0.21	-0.5
4,113,520	+		PfGW456L13_3653	0.21	-0.1
4,113,521	-		PfGW456L13_3653	0.21	-0.3
4,113,521	-		PfGW456L13_3653	0.21	-0.0
4,113,521	-		PfGW456L13_3653	0.21	-0.8
4,113,521	-		PfGW456L13_3653	0.21	+0.5
4,113,521	-		PfGW456L13_3653	0.21	+0.6
4,113,552	+		PfGW456L13_3653	0.28	-0.6
4,113,713	+		PfGW456L13_3653	0.64	+0.9
4,113,713	+		PfGW456L13_3653	0.64	+0.2
4,113,713	+		PfGW456L13_3653	0.64	+0.1
4,113,713	+		PfGW456L13_3653	0.64	-0.3
4,113,713	+		PfGW456L13_3653	0.64	-2.6
4,113,713	+		PfGW456L13_3653	0.64	+1.0
4,113,713	+		PfGW456L13_3653	0.64	-0.5
4,113,713	+		PfGW456L13_3653	0.64	+0.7
4,113,714	-		PfGW456L13_3653	0.64	-1.5
4,113,714	-		PfGW456L13_3653	0.64	-0.4
4,113,714	-		PfGW456L13_3653	0.64	+0.2
4,113,714	-		PfGW456L13_3653	0.64	+0.4
4,113,714	-		PfGW456L13_3653	0.64	-0.9
4,113,714	-		PfGW456L13_3653	0.64	+0.3
4,113,714	-		PfGW456L13_3653	0.64	+1.0
4,113,714	-		PfGW456L13_3653	0.64	-0.1
4,113,714	-		PfGW456L13_3653	0.64	-0.7
4,113,763	+		PfGW456L13_3653	0.75	-0.3
4,113,763	+		PfGW456L13_3653	0.75	-0.3
4,113,763	+		PfGW456L13_3653	0.75	-0.4
4,113,763	+		PfGW456L13_3653	0.75	-0.2
4,113,763	+		PfGW456L13_3653	0.75	-0.7
4,113,763	+		PfGW456L13_3653	0.75	+1.4
4,113,764	-		PfGW456L13_3653	0.76	-1.0
4,113,783	+				+1.5
4,113,842	+				+0.9
4,113,842	+				-0.8
4,113,842	+				-0.3
4,113,843	-				+1.5
4,113,843	-				-0.5
4,113,843	-				-0.5
4,113,864	-				+0.3
4,113,873	+				-0.6
4,113,873	+				-0.5
4,113,874	-				-0.1
4,113,874	-				-0.9
4,113,929	+				-0.3
4,113,930	-				+0.8
4,113,930	-				-0.7
4,114,039	-		PfGW456L13_3654	0.15	-0.1
4,114,103	+		PfGW456L13_3654	0.25	+0.1
4,114,103	+		PfGW456L13_3654	0.25	-0.5
4,114,146	+		PfGW456L13_3654	0.31	+0.2
4,114,193	-		PfGW456L13_3654	0.38	-0.1
4,114,193	-		PfGW456L13_3654	0.38	-0.1
4,114,210	+		PfGW456L13_3654	0.41	-0.4
4,114,211	-		PfGW456L13_3654	0.41	+0.3
4,114,294	+		PfGW456L13_3654	0.53	+0.5
4,114,294	+		PfGW456L13_3654	0.53	-1.4
4,114,294	+		PfGW456L13_3654	0.53	-0.7
4,114,294	+		PfGW456L13_3654	0.53	+0.4
4,114,294	+		PfGW456L13_3654	0.53	-0.2
4,114,294	+		PfGW456L13_3654	0.53	-1.6
4,114,294	+		PfGW456L13_3654	0.53	+0.1
4,114,294	+		PfGW456L13_3654	0.53	-0.5
4,114,295	-		PfGW456L13_3654	0.53	-0.5
4,114,295	-		PfGW456L13_3654	0.53	-1.5
4,114,295	-		PfGW456L13_3654	0.53	+1.8
4,114,295	-		PfGW456L13_3654	0.53	+0.9
4,114,295	-		PfGW456L13_3654	0.53	-0.1
4,114,295	-		PfGW456L13_3654	0.53	-0.8
4,114,305	+		PfGW456L13_3654	0.55	+0.5
4,114,305	+		PfGW456L13_3654	0.55	-0.4
4,114,306	-		PfGW456L13_3654	0.55	+0.4
4,114,306	-		PfGW456L13_3654	0.55	+1.0
4,114,410	-		PfGW456L13_3654	0.70	+0.4
4,114,410	-		PfGW456L13_3654	0.70	-0.1
4,114,563	+				+0.3
4,114,563	+				+0.4
4,114,563	+				-0.5
4,114,563	+				-0.6
4,114,563	+				+0.5
4,114,563	+				+1.3
4,114,563	+				+1.7
4,114,563	+				-0.6
4,114,563	+				-0.3
4,114,563	+				+0.3
4,114,563	+				+0.5
4,114,563	+				+0.1
4,114,563	+				-0.2
4,114,563	+				+1.3
4,114,563	+				-1.1
4,114,563	+				-0.0
4,114,563	+				-0.1
4,114,563	+				+0.7
4,114,563	+				+0.8
4,114,564	-				+0.2
4,114,564	-				-0.3
4,114,564	-				+1.6
4,114,564	-				-1.6
4,114,564	-				+0.8
4,114,564	-				-0.7
4,114,564	-				+1.4
4,114,564	-				-0.5
4,114,564	-				-0.1
4,114,564	-				+0.3
4,114,564	-				-1.1
4,114,564	-				+0.6
4,114,564	-				+0.8
4,114,638	+				-1.1
4,114,759	+				+0.5
4,114,759	+				+0.8
4,114,760	-				-0.9