Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4335

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
5,180,245	+		Echvi_4333	0.51	+0.1
5,180,283	+		Echvi_4333	0.56	-1.2
5,180,288	+		Echvi_4333	0.57	+0.2
5,180,288	+		Echvi_4333	0.57	+0.4
5,180,339	-		Echvi_4333	0.65	-0.2
5,180,473	+		Echvi_4333	0.86	-0.5
5,180,486	+		Echvi_4333	0.88	-0.2
5,180,493	-		Echvi_4333	0.89	+0.4
5,180,493	-		Echvi_4333	0.89	+1.4
5,180,493	-		Echvi_4333	0.89	-0.4
5,180,556	+				-0.7
5,180,567	+				-0.2
5,180,567	+				-1.4
5,180,568	-				-1.3
5,180,615	+				+0.9
5,180,616	-				+1.1
5,180,616	-				+0.4
5,180,639	+				-0.4
5,180,639	+				+0.8
5,180,640	-				-1.5
5,180,640	-				+0.6
5,180,653	+				-2.2
5,180,678	-				+1.9
5,180,680	-				+1.0
5,180,774	+				+1.3
5,180,774	+				-0.9
5,180,775	-				-0.2
5,180,775	-				-0.0
5,180,775	-				-2.3
5,180,775	-				+1.6
5,180,775	-				-0.9
5,180,775	-				-1.8
5,180,850	+				+0.6
5,180,850	+				-0.1
5,180,850	+				+1.2
5,180,851	-				-0.8
5,180,851	-				-0.1
5,180,851	-				-0.8
5,180,890	+				-0.5
5,180,894	+				+1.5
5,180,894	+				+0.1
5,180,895	-				-1.8
5,180,895	-				+0.5
5,180,895	-				+0.1
5,180,895	-				-1.1
5,180,925	-				-1.5
5,180,957	+		Echvi_4334	0.19	+1.9
5,180,996	-		Echvi_4334	0.34	+0.3
5,181,007	+		Echvi_4334	0.39	+0.9
5,181,099	-		Echvi_4334	0.74	-0.7
5,181,158	+				+0.8
5,181,159	-				-0.1
5,181,170	+				-0.7
5,181,170	+				+0.9
5,181,173	-				+0.1
5,181,195	+				-0.9
5,181,213	-				-0.6
5,181,232	-				+0.8
5,181,245	+				-1.7
5,181,274	+				+0.2
5,181,286	-				+0.3
5,181,289	+				+1.8
5,181,289	+				-0.4
5,181,289	+				+1.6
5,181,289	+				-0.4
5,181,290	-				-0.8
5,181,290	-				+0.0
5,181,290	-				-0.6
5,181,290	-				-1.5
5,181,292	+				+1.5
5,181,293	-				-1.7
5,181,293	-				+0.1
5,181,293	-				+1.3
5,181,295	+				+0.1
5,181,297	+				+0.5
5,181,297	+				-0.2
5,181,298	-				-0.0
5,181,346	+				+0.1
5,181,346	+				+0.9
5,181,347	-				-2.1
5,181,347	-				+0.2
5,181,347	-				-1.1
5,181,347	-				-0.3
5,181,488	+				-0.2
5,181,537	+				+0.8
5,181,538	-				+0.9
5,181,657	+		Echvi_4335	0.12	+2.4
5,181,658	-		Echvi_4335	0.12	+0.2
5,181,694	+		Echvi_4335	0.13	+0.9
5,181,694	+		Echvi_4335	0.13	+0.5
5,181,731	+		Echvi_4335	0.15	-0.1
5,181,731	+		Echvi_4335	0.15	-0.5
5,181,731	+		Echvi_4335	0.15	-1.3
5,181,783	+		Echvi_4335	0.16	-0.7
5,181,785	+		Echvi_4335	0.16	+0.4
5,181,786	-		Echvi_4335	0.16	-0.5
5,181,786	-		Echvi_4335	0.16	+0.9
5,181,860	+		Echvi_4335	0.18	+0.8
5,181,875	+		Echvi_4335	0.19	+1.1
5,181,875	+		Echvi_4335	0.19	-1.5
5,181,876	-		Echvi_4335	0.19	-2.0
5,181,876	-		Echvi_4335	0.19	+0.4
5,181,876	-		Echvi_4335	0.19	+2.2
5,181,881	-		Echvi_4335	0.19	+0.1
5,181,881	-		Echvi_4335	0.19	-0.8
5,181,881	-		Echvi_4335	0.19	-0.0
5,181,886	-		Echvi_4335	0.19	-0.1
5,181,930	-		Echvi_4335	0.20	+0.6
5,181,931	+		Echvi_4335	0.20	+0.0
5,181,931	+		Echvi_4335	0.20	+0.9
5,181,932	-		Echvi_4335	0.20	-0.3
5,181,947	+		Echvi_4335	0.21	-1.0
5,181,947	+		Echvi_4335	0.21	+0.3
5,181,948	-		Echvi_4335	0.21	+0.8
5,181,975	+		Echvi_4335	0.22	+0.9
5,181,976	-		Echvi_4335	0.22	-2.2
5,181,976	-		Echvi_4335	0.22	-0.8
5,181,993	+		Echvi_4335	0.22	-1.7
5,182,011	+		Echvi_4335	0.23	-0.1
5,182,011	+		Echvi_4335	0.23	-1.1
5,182,012	-		Echvi_4335	0.23	-1.6
5,182,012	-		Echvi_4335	0.23	-1.9
5,182,013	+		Echvi_4335	0.23	-1.2
5,182,014	-		Echvi_4335	0.23	+1.2
5,182,014	-		Echvi_4335	0.23	-1.5
5,182,014	-		Echvi_4335	0.23	+0.4
5,182,117	+		Echvi_4335	0.26	-0.1
5,182,118	-		Echvi_4335	0.26	+0.6
5,182,150	+		Echvi_4335	0.27	+0.5
5,182,150	+		Echvi_4335	0.27	+0.9
5,182,150	+		Echvi_4335	0.27	-2.1
5,182,150	+		Echvi_4335	0.27	+0.8
5,182,152	+		Echvi_4335	0.27	-1.3
5,182,152	+		Echvi_4335	0.27	+1.4
5,182,152	+		Echvi_4335	0.27	+0.7
5,182,152	+		Echvi_4335	0.27	-0.0
5,182,200	-		Echvi_4335	0.28	+0.8
5,182,295	+		Echvi_4335	0.31	+0.9
5,182,295	+		Echvi_4335	0.31	+1.1
5,182,295	+		Echvi_4335	0.31	+0.1
5,182,296	-		Echvi_4335	0.31	-1.7
5,182,296	-		Echvi_4335	0.31	-0.1
5,182,297	+		Echvi_4335	0.31	-0.4
5,182,297	+		Echvi_4335	0.31	+0.9
5,182,334	+		Echvi_4335	0.32	+0.9
5,182,334	+		Echvi_4335	0.32	-2.5
5,182,492	+		Echvi_4335	0.37	+0.8
5,182,493	-		Echvi_4335	0.37	+0.2
5,182,493	-		Echvi_4335	0.37	+0.2
5,182,497	-		Echvi_4335	0.37	-0.6
5,182,561	-		Echvi_4335	0.39	-0.7
5,182,561	-		Echvi_4335	0.39	-1.6
5,183,976	+				-0.6
5,183,976	+				-0.5
5,183,984	+				+0.7
5,183,987	+				-0.5
5,183,988	-				+0.1
5,184,048	+				-0.4
5,184,106	-				+1.5
5,184,118	-				-0.5
5,184,137	-				+0.6
5,184,137	-				-0.1
5,184,172	+				-1.1
5,184,172	+				-0.5
5,184,172	+				-0.5
5,184,172	+				-0.7
5,184,172	+				-1.4
5,184,173	-				-0.5
5,184,173	-				-1.4
5,184,173	-				+0.3
5,184,209	+				+0.1
5,184,211	+				-0.2
5,184,230	+				-0.3
5,184,231	-				-0.4
5,184,231	-				+0.7
5,184,284	+				+0.3
5,184,284	+				-1.1
5,184,301	-				-0.6
5,184,342	+				+0.4
5,184,342	+				-1.1
5,184,344	+				-0.1
5,184,344	+				-0.3
5,184,345	-				-1.4
5,184,345	-				+0.9
5,184,345	-				-1.4
5,184,345	-				-1.6
5,184,381	+				+0.7
5,184,382	-				-1.6
5,184,403	-				-0.4
5,184,406	-				-0.2
5,184,437	+				-0.2
5,184,465	+				+0.3
5,184,465	+				-0.1
5,184,578	-				-0.5
5,184,629	-				-0.9
5,184,640	+				+0.1
5,184,677	-				+0.5
5,184,699	+				-1.5
5,184,703	+				+0.8
5,184,704	-				+0.5
5,184,728	+				-0.4
5,184,728	+				-0.9
5,184,788	-				+1.8
5,184,809	+				+0.2
5,184,809	+				-0.2
5,184,810	-				-0.1
5,184,863	+				-0.3
5,184,865	+				+0.9
5,184,866	-				-0.0
5,184,940	+		Echvi_4337	0.11	-1.0
5,184,941	-		Echvi_4337	0.12	+0.4
5,184,941	-		Echvi_4337	0.12	+0.4
5,184,941	-		Echvi_4337	0.12	-0.5
5,184,941	-		Echvi_4337	0.12	-0.5
5,184,944	+		Echvi_4337	0.12	+0.1
5,184,945	-		Echvi_4337	0.12	+0.0
5,184,945	-		Echvi_4337	0.12	-1.1
5,185,038	+		Echvi_4337	0.16	+1.8
5,185,038	+		Echvi_4337	0.16	+2.4
5,185,038	+		Echvi_4337	0.16	-0.1
5,185,039	-		Echvi_4337	0.16	+0.3
5,185,059	-		Echvi_4337	0.17	+0.4
5,185,076	+		Echvi_4337	0.18	+0.4
5,185,100	+		Echvi_4337	0.19	+0.7
5,185,100	+		Echvi_4337	0.19	-1.1
5,185,101	-		Echvi_4337	0.19	-0.5
5,185,101	-		Echvi_4337	0.19	-0.5
5,185,336	-		Echvi_4337	0.30	+0.1
5,185,340	+		Echvi_4337	0.30	+1.1
5,185,340	+		Echvi_4337	0.30	-0.6
5,185,340	+		Echvi_4337	0.30	+0.4
5,185,341	-		Echvi_4337	0.31	-0.3
5,185,377	-		Echvi_4337	0.32	-2.8
5,185,389	+		Echvi_4337	0.33	-0.2
5,185,389	+		Echvi_4337	0.33	+0.1
5,185,389	+		Echvi_4337	0.33	-1.4
5,185,389	+		Echvi_4337	0.33	-0.4
5,185,389	+		Echvi_4337	0.33	+1.5
5,185,389	+		Echvi_4337	0.33	-0.1
5,185,389	+		Echvi_4337	0.33	+1.2
5,185,389	+		Echvi_4337	0.33	+0.7
5,185,389	+		Echvi_4337	0.33	-0.8
5,185,389	+		Echvi_4337	0.33	-0.1
5,185,389	+		Echvi_4337	0.33	+0.4
5,185,389	+		Echvi_4337	0.33	+0.9
5,185,389	+		Echvi_4337	0.33	-0.8
5,185,390	-		Echvi_4337	0.33	-1.1
5,185,390	-		Echvi_4337	0.33	+1.9
5,185,390	-		Echvi_4337	0.33	+0.1
5,185,390	-		Echvi_4337	0.33	-0.4
5,185,390	-		Echvi_4337	0.33	+0.7
5,185,390	-		Echvi_4337	0.33	-0.5
5,185,390	-		Echvi_4337	0.33	-0.2
5,185,391	+		Echvi_4337	0.33	-0.3
5,185,391	+		Echvi_4337	0.33	+1.0
5,185,391	+		Echvi_4337	0.33	-0.1
5,185,392	-		Echvi_4337	0.33	-0.8
5,185,392	-		Echvi_4337	0.33	+0.0
5,185,392	-		Echvi_4337	0.33	+0.6
5,185,392	-		Echvi_4337	0.33	+0.3
5,185,392	-		Echvi_4337	0.33	-0.2
5,185,393	+		Echvi_4337	0.33	-0.0
5,185,393	+		Echvi_4337	0.33	+1.4
5,185,393	+		Echvi_4337	0.33	+0.6
5,185,393	+		Echvi_4337	0.33	-0.5
5,185,394	-		Echvi_4337	0.33	+1.8
5,185,394	-		Echvi_4337	0.33	-1.6
5,185,395	+		Echvi_4337	0.33	-0.2
5,185,395	+		Echvi_4337	0.33	-1.2
5,185,395	+		Echvi_4337	0.33	+0.0
5,185,396	-		Echvi_4337	0.33	+0.4
5,185,396	-		Echvi_4337	0.33	-2.0
5,185,480	+		Echvi_4337	0.37	-0.2
5,185,480	+		Echvi_4337	0.37	+0.7
5,185,480	+		Echvi_4337	0.37	+2.5
5,185,481	-		Echvi_4337	0.37	+0.8
5,185,481	-		Echvi_4337	0.37	+0.1
5,185,481	-		Echvi_4337	0.37	-0.6
5,185,482	+		Echvi_4337	0.37	-1.4
5,185,513	+		Echvi_4337	0.39	-0.9
5,185,552	+		Echvi_4337	0.41	+0.1
5,185,578	-		Echvi_4337	0.42	-0.4
5,185,578	-		Echvi_4337	0.42	+2.5
5,185,578	-		Echvi_4337	0.42	-1.9
5,185,623	-		Echvi_4337	0.44	-0.7
5,185,670	+		Echvi_4337	0.46	+0.4
5,185,682	-		Echvi_4337	0.47	+0.1
5,185,688	-		Echvi_4337	0.47	+0.2