Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1912

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
2,243,489	+		Echvi_1911	0.44	-1.5
2,243,509	-		Echvi_1911	0.45	-0.3
2,243,520	-		Echvi_1911	0.46	+0.2
2,243,593	+		Echvi_1911	0.51	+0.5
2,243,624	+		Echvi_1911	0.53	-0.5
2,243,624	+		Echvi_1911	0.53	+0.1
2,243,642	-		Echvi_1911	0.55	+0.5
2,243,801	-		Echvi_1911	0.66	+2.1
2,243,806	+		Echvi_1911	0.66	-0.1
2,243,806	+		Echvi_1911	0.66	-1.6
2,243,810	+		Echvi_1911	0.66	+1.2
2,243,811	-		Echvi_1911	0.67	+0.5
2,243,811	-		Echvi_1911	0.67	+0.2
2,243,861	-		Echvi_1911	0.70	+0.2
2,243,861	-		Echvi_1911	0.70	+1.3
2,243,866	+		Echvi_1911	0.70	+0.6
2,243,867	-		Echvi_1911	0.70	+0.1
2,243,872	+		Echvi_1911	0.71	-0.4
2,243,872	+		Echvi_1911	0.71	+0.3
2,243,904	-		Echvi_1911	0.73	-0.7
2,243,948	+		Echvi_1911	0.76	-2.1
2,243,967	+		Echvi_1911	0.77	-0.0
2,243,971	+		Echvi_1911	0.78	-0.7
2,243,971	+		Echvi_1911	0.78	+1.2
2,243,972	-		Echvi_1911	0.78	-0.2
2,243,972	-		Echvi_1911	0.78	+0.4
2,243,990	+		Echvi_1911	0.79	+0.2
2,243,990	+		Echvi_1911	0.79	-1.3
2,243,990	+		Echvi_1911	0.79	+1.7
2,243,991	-		Echvi_1911	0.79	+0.4
2,243,991	-		Echvi_1911	0.79	-1.3
2,243,992	+		Echvi_1911	0.79	-1.7
2,243,992	+		Echvi_1911	0.79	-1.0
2,243,993	-		Echvi_1911	0.79	+0.7
2,243,998	+		Echvi_1911	0.80	-0.7
2,243,998	+		Echvi_1911	0.80	+0.5
2,243,999	-		Echvi_1911	0.80	+1.4
2,244,060	+		Echvi_1911	0.84	-0.0
2,244,060	+		Echvi_1911	0.84	+0.1
2,244,060	+		Echvi_1911	0.84	-0.6
2,244,061	-		Echvi_1911	0.84	+0.1
2,244,061	-		Echvi_1911	0.84	-0.4
2,244,091	+		Echvi_1911	0.86	-0.1
2,244,091	+		Echvi_1911	0.86	-0.7
2,244,187	+				-0.9
2,244,188	-				+0.6
2,244,188	-				+0.2
2,244,265	-				+0.7
2,244,270	+				-2.1
2,244,273	+				-0.1
2,244,273	+				+1.6
2,244,274	-				+0.2
2,244,314	+				+1.7
2,244,315	-				+0.4
2,244,315	-				+0.7
2,244,367	+				+0.9
2,244,379	-				+0.1
2,244,456	+				-1.4
2,244,456	+				+2.1
2,244,456	+				+0.2
2,244,457	-				-1.0
2,244,485	+				-1.0
2,244,485	+				-1.4
2,244,485	+				+0.3
2,244,522	+				-0.2
2,244,523	-				+1.8
2,244,540	+				-0.3
2,244,793	+				-1.2
2,244,793	+				+0.2
2,244,797	-				-0.6
2,244,811	+				+0.3
2,244,812	-				+1.6
2,244,812	-				+1.7
2,244,816	+				-0.3
2,244,830	+				+0.5
2,244,830	+				-0.6
2,244,866	+		Echvi_1912	0.11	-0.0
2,244,867	-		Echvi_1912	0.11	-0.9
2,244,886	+		Echvi_1912	0.11	+1.3
2,244,961	+		Echvi_1912	0.14	+1.1
2,244,962	-		Echvi_1912	0.14	-0.2
2,245,183	+		Echvi_1912	0.20	+1.0
2,245,284	-		Echvi_1912	0.23	-0.3
2,245,322	-		Echvi_1912	0.24	+0.7
2,245,418	-		Echvi_1912	0.27	+0.7
2,245,466	+		Echvi_1912	0.28	+1.0
2,245,466	+		Echvi_1912	0.28	-1.1
2,245,470	+		Echvi_1912	0.28	+0.6
2,245,475	+		Echvi_1912	0.28	+0.4
2,245,475	+		Echvi_1912	0.28	+0.1
2,245,515	+		Echvi_1912	0.29	-2.7
2,245,515	+		Echvi_1912	0.29	-0.1
2,245,515	+		Echvi_1912	0.29	+0.3
2,245,592	+		Echvi_1912	0.31	+0.3
2,245,592	+		Echvi_1912	0.31	+1.6
2,245,707	+		Echvi_1912	0.35	+0.8
2,245,734	+		Echvi_1912	0.35	+1.5
2,245,748	+		Echvi_1912	0.36	-1.1
2,245,748	+		Echvi_1912	0.36	-0.1
2,245,749	-		Echvi_1912	0.36	-2.0
2,245,832	+		Echvi_1912	0.38	-1.3
2,245,833	-		Echvi_1912	0.38	+0.4
2,245,833	-		Echvi_1912	0.38	-1.9
2,245,836	+		Echvi_1912	0.38	+0.5
2,245,836	+		Echvi_1912	0.38	-0.5
2,245,843	-		Echvi_1912	0.39	+1.7
2,245,901	+		Echvi_1912	0.40	-0.8
2,245,901	+		Echvi_1912	0.40	+1.1
2,245,901	+		Echvi_1912	0.40	+0.8
2,246,058	+		Echvi_1912	0.45	+1.1
2,246,071	+		Echvi_1912	0.45	+0.0
2,246,072	-		Echvi_1912	0.45	-0.3
2,246,072	-		Echvi_1912	0.45	+1.2
2,246,072	-		Echvi_1912	0.45	+0.0
2,246,152	+		Echvi_1912	0.47	+0.7
2,246,152	+		Echvi_1912	0.47	+0.2
2,246,153	-		Echvi_1912	0.47	+0.7
2,246,175	+		Echvi_1912	0.48	+0.2
2,246,176	-		Echvi_1912	0.48	+0.9
2,246,353	+		Echvi_1912	0.53	-0.3
2,246,420	+		Echvi_1912	0.55	+1.1
2,246,427	-				+0.5
2,246,427	-		Echvi_1912	0.55	+0.3
2,246,427	-		Echvi_1912	0.55	+1.9
2,246,475	-		Echvi_1912	0.57	+0.6
2,246,519	+		Echvi_1912	0.58	+0.2
2,246,519	+		Echvi_1912	0.58	+0.3
2,246,520	-		Echvi_1912	0.58	-1.5
2,246,707	-		Echvi_1912	0.63	+2.1
2,246,801	-		Echvi_1912	0.66	+0.4
2,246,945	-		Echvi_1912	0.70	+2.5
2,247,144	-		Echvi_1912	0.76	+1.2
2,247,159	+		Echvi_1912	0.76	+1.4
2,247,160	-		Echvi_1912	0.76	-2.3
2,247,160	-		Echvi_1912	0.76	+0.0
2,247,169	+		Echvi_1912	0.76	-0.7
2,247,169	+		Echvi_1912	0.76	-0.7
2,247,230	+		Echvi_1912	0.78	-0.4
2,247,231	-		Echvi_1912	0.78	+1.1
2,247,231	-		Echvi_1912	0.78	-1.4
2,247,231	-		Echvi_1912	0.78	+0.5
2,247,231	-		Echvi_1912	0.78	+0.4
2,247,262	-		Echvi_1912	0.79	+0.5
2,247,426	+		Echvi_1912	0.84	+0.5
2,247,503	-		Echvi_1912	0.86	-0.4
2,247,557	+		Echvi_1912	0.87	-1.2
2,247,558	-		Echvi_1912	0.87	+1.5
2,247,584	-		Echvi_1912	0.88	+1.2
2,247,606	+		Echvi_1912	0.89	-0.0
2,247,607	-		Echvi_1912	0.89	+0.7
2,247,607	-		Echvi_1912	0.89	-1.1
2,247,607	-		Echvi_1912	0.89	-1.3
2,247,616	+		Echvi_1912	0.89	+2.1
2,247,647	+		Echvi_1912	0.90	+2.1
2,247,647	+		Echvi_1912	0.90	+0.2
2,247,647	+		Echvi_1912	0.90	-0.3
2,247,647	+		Echvi_1912	0.90	-0.4
2,247,648	-		Echvi_1912	0.90	-0.5
2,247,648	-		Echvi_1912	0.90	-0.7
2,247,648	-		Echvi_1912	0.90	+1.2
2,247,650	+		Echvi_1912	0.90	+0.1
2,247,651	-		Echvi_1912	0.90	-1.0
2,247,651	-		Echvi_1912	0.90	+0.3
2,247,680	+				-0.1
2,247,680	+				+2.2
2,247,832	+				-0.8
2,247,839	+				+2.7
2,247,840	-				+0.9
2,247,840	-				+0.1
2,247,953	-				-0.6
2,247,978	+				+0.7
2,248,033	+				-0.2
2,248,038	-				+0.8
2,248,285	-		Echvi_1913	0.19	-1.5
2,248,285	-		Echvi_1913	0.19	+3.2
2,248,447	+		Echvi_1913	0.31	-0.5
2,248,490	-		Echvi_1913	0.34	-2.4
2,248,575	-		Echvi_1913	0.41	+0.7
2,248,577	+		Echvi_1913	0.41	-1.7
2,248,577	+		Echvi_1913	0.41	-0.9
2,248,578	-		Echvi_1913	0.41	-0.6
2,248,578	-		Echvi_1913	0.41	-0.9
2,248,581	+		Echvi_1913	0.41	+2.1
2,248,582	-		Echvi_1913	0.41	+0.0
2,248,776	-		Echvi_1913	0.55	+3.1
2,248,779	-		Echvi_1913	0.56	+0.5
2,248,804	+		Echvi_1913	0.58	+0.0
2,248,804	+		Echvi_1913	0.58	-0.3
2,248,862	-		Echvi_1913	0.62	+0.6
2,248,877	-		Echvi_1913	0.63	-1.5
2,248,935	+		Echvi_1913	0.67	-1.5
2,248,935	+		Echvi_1913	0.67	-2.0
2,248,935	+		Echvi_1913	0.67	+2.1
2,248,936	-		Echvi_1913	0.67	-0.5
2,248,980	+		Echvi_1913	0.71	-2.1
2,248,980	+		Echvi_1913	0.71	+2.4
2,248,980	+		Echvi_1913	0.71	+0.5
2,248,980	+		Echvi_1913	0.71	+1.0
2,248,981	-		Echvi_1913	0.71	+1.9