Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1234

Experiment: D-Cellobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cellobiose (C)
1,417,700	+		Echvi_1233	0.36	+0.8
1,417,701	-		Echvi_1233	0.36	+0.5
1,417,701	-		Echvi_1233	0.36	+0.2
1,417,746	+		Echvi_1233	0.40	+1.1
1,417,787	-		Echvi_1233	0.43	-2.1
1,417,787	-		Echvi_1233	0.43	-0.5
1,417,831	+		Echvi_1233	0.46	+0.5
1,417,832	-		Echvi_1233	0.46	-0.3
1,417,846	+		Echvi_1233	0.47	+2.3
1,417,846	+		Echvi_1233	0.47	-0.8
1,417,846	+		Echvi_1233	0.47	-0.1
1,417,847	-		Echvi_1233	0.47	+1.2
1,417,847	-		Echvi_1233	0.47	-1.2
1,417,847	-		Echvi_1233	0.47	-2.3
1,417,861	-		Echvi_1233	0.48	-0.5
1,417,940	-		Echvi_1233	0.54	+0.5
1,417,940	-		Echvi_1233	0.54	+0.3
1,417,974	-		Echvi_1233	0.57	-2.1
1,418,033	-		Echvi_1233	0.61	+0.6
1,418,040	+		Echvi_1233	0.62	-0.1
1,418,040	+		Echvi_1233	0.62	+0.1
1,418,040	+		Echvi_1233	0.62	-0.4
1,418,040	+		Echvi_1233	0.62	-0.9
1,418,040	+		Echvi_1233	0.62	+1.8
1,418,040	+		Echvi_1233	0.62	+1.4
1,418,040	+		Echvi_1233	0.62	-1.1
1,418,040	+		Echvi_1233	0.62	-0.9
1,418,040	+		Echvi_1233	0.62	+2.1
1,418,040	+		Echvi_1233	0.62	+1.0
1,418,040	+		Echvi_1233	0.62	-0.1
1,418,040	+		Echvi_1233	0.62	-0.3
1,418,040	+		Echvi_1233	0.62	+0.7
1,418,040	+		Echvi_1233	0.62	-2.8
1,418,040	+		Echvi_1233	0.62	-0.5
1,418,040	+		Echvi_1233	0.62	+0.0
1,418,040	+		Echvi_1233	0.62	+0.3
1,418,041	-		Echvi_1233	0.62	-0.5
1,418,041	-		Echvi_1233	0.62	-1.9
1,418,041	-		Echvi_1233	0.62	-0.1
1,418,041	-		Echvi_1233	0.62	-0.9
1,418,041	-		Echvi_1233	0.62	-1.5
1,418,041	-		Echvi_1233	0.62	-0.8
1,418,041	-		Echvi_1233	0.62	+0.5
1,418,041	-		Echvi_1233	0.62	-1.0
1,418,041	-		Echvi_1233	0.62	-0.5
1,418,041	-		Echvi_1233	0.62	+0.2
1,418,041	-		Echvi_1233	0.62	+0.6
1,418,041	-		Echvi_1233	0.62	-1.3
1,418,041	-		Echvi_1233	0.62	-0.3
1,418,041	-		Echvi_1233	0.62	-0.7
1,418,041	-		Echvi_1233	0.62	-0.7
1,418,041	-		Echvi_1233	0.62	+0.4
1,418,041	-		Echvi_1233	0.62	-0.1
1,418,041	-		Echvi_1233	0.62	-2.3
1,418,041	-		Echvi_1233	0.62	+1.1
1,418,069	-		Echvi_1233	0.64	-1.3
1,418,094	-		Echvi_1233	0.66	-0.9
1,418,120	-		Echvi_1233	0.68	+1.2
1,418,149	+		Echvi_1233	0.70	-0.2
1,418,199	-		Echvi_1233	0.74	+0.5
1,418,199	-		Echvi_1233	0.74	+1.8
1,418,199	-		Echvi_1233	0.74	-1.4
1,418,251	+		Echvi_1233	0.78	+0.1
1,418,252	-		Echvi_1233	0.78	-0.2
1,418,507	-				-0.3
1,418,569	-				+0.5
1,418,629	+				-0.9
1,418,630	-				+1.0
1,418,630	-				+0.4
1,418,630	-				+0.1
1,418,650	+				-0.3
1,418,650	+				-0.8
1,418,651	-				+1.1
1,418,667	+				-0.6
1,418,671	-				-0.1
1,418,671	-				-0.3
1,418,671	-				+0.6
1,418,671	-				-0.7
1,418,676	+				-1.8
1,418,676	+				+0.4
1,418,677	-				+0.7
1,418,681	-				-0.5
1,418,685	+				+0.4
1,418,686	-				+1.9
1,418,745	+		Echvi_1234	0.15	-0.9
1,418,812	-		Echvi_1234	0.29	-1.6
1,418,942	+		Echvi_1234	0.57	-1.6
1,418,942	+		Echvi_1234	0.57	-0.1
1,418,943	-		Echvi_1234	0.57	+0.3
1,418,943	-		Echvi_1234	0.57	+0.4
1,418,943	-		Echvi_1234	0.57	-0.5
1,418,943	-		Echvi_1234	0.57	+1.8
1,419,019	+		Echvi_1234	0.74	+0.9
1,419,019	+		Echvi_1234	0.74	+0.3
1,419,019	+		Echvi_1234	0.74	+0.4
1,419,020	-		Echvi_1234	0.74	+0.4
1,419,021	+		Echvi_1234	0.74	-0.2
1,419,021	+		Echvi_1234	0.74	-0.6
1,419,021	+		Echvi_1234	0.74	+1.0
1,419,021	+		Echvi_1234	0.74	+1.2
1,419,021	+		Echvi_1234	0.74	+0.8
1,419,021	+		Echvi_1234	0.74	+0.0
1,419,021	+		Echvi_1234	0.74	+1.2
1,419,021	+		Echvi_1234	0.74	+1.0
1,419,022	-		Echvi_1234	0.74	+0.7
1,419,022	-		Echvi_1234	0.74	+0.9
1,419,022	-		Echvi_1234	0.74	+0.6
1,419,022	-		Echvi_1234	0.74	-0.3
1,419,080	+		Echvi_1234	0.87	+0.1
1,419,080	+		Echvi_1234	0.87	-0.1
1,419,093	+		Echvi_1234	0.89	-0.5
1,419,093	+		Echvi_1234	0.89	+1.8
1,419,093	+		Echvi_1234	0.89	-2.6
1,419,146	+				-0.5
1,419,180	+				+1.6
1,419,181	-				+1.8
1,419,181	-				-1.4
1,419,199	+				-0.1
1,419,211	+				+0.1
1,419,211	+				+0.3
1,419,212	-				-0.9
1,419,212	-				+0.8
1,419,259	-				-0.4
1,419,320	+				+1.7
1,419,321	-				-0.7
1,419,345	-				-2.9
1,419,396	+				-0.2
1,419,396	+				-0.5
1,419,396	+				+0.8
1,419,400	-				-1.1
1,419,400	-				+0.1
1,419,453	-		Echvi_1235	0.16	+1.1
1,419,586	+		Echvi_1235	0.38	-0.4
1,419,673	-		Echvi_1235	0.52	-2.9
1,419,704	+		Echvi_1235	0.57	-0.3
1,419,704	+		Echvi_1235	0.57	+1.8
1,419,705	-		Echvi_1235	0.57	+0.9
1,419,705	-		Echvi_1235	0.57	-2.4
1,419,705	-		Echvi_1235	0.57	+0.2
1,419,708	+		Echvi_1235	0.58	-0.0
1,419,708	+		Echvi_1235	0.58	-1.4
1,419,757	-		Echvi_1235	0.66	+1.2
1,419,760	+		Echvi_1235	0.66	-0.7
1,419,760	+		Echvi_1235	0.66	-0.1
1,419,761	-		Echvi_1235	0.67	+1.0
1,419,761	-		Echvi_1235	0.67	+2.1
1,419,761	-		Echvi_1235	0.67	-1.6
1,419,761	-		Echvi_1235	0.67	+0.8
1,419,793	+		Echvi_1235	0.72	-0.2
1,419,793	+		Echvi_1235	0.72	+0.1
1,419,794	-		Echvi_1235	0.72	-1.2
1,419,794	-		Echvi_1235	0.72	-2.7
1,419,814	-		Echvi_1235	0.75	+1.5
1,419,814	-		Echvi_1235	0.75	-0.2
1,419,961	+				-1.7
1,419,966	+				-1.6
1,419,967	-				+1.3
1,420,018	-				-1.5
1,420,093	-		Echvi_1236	0.31	+0.9
1,420,093	-		Echvi_1236	0.31	-1.0