Experiment: acetate 140 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt eutH and eutG are separated by 216 nucleotides eutG and eutJ overlap by 11 nucleotides eutJ and eutE are separated by 10 nucleotides
b2452: eutH - predicted inner membrane protein (NCBI), at 2,564,903 to 2,566,129
eutH
b2453: eutG - ethanolamine utilization; homolog of Salmonella enzyme, similar to iron-containing alcohol dehydrogenase (VIMSS), at 2,566,346 to 2,567,533
eutG
b2454: eutJ - predicted chaperonin, ethanolamine utilization protein (NCBI), at 2,567,523 to 2,568,359
eutJ
b2455: eutE - predicted aldehyde dehydrogenase, ethanolamine utilization protein (NCBI), at 2,568,370 to 2,569,773
eutE
Position (kb)
2566
2567
2568 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2565.353 kb on - strand, within eutH at 2565.416 kb on + strand, within eutH at 2565.454 kb on - strand, within eutH at 2565.454 kb on - strand, within eutH at 2565.593 kb on + strand, within eutH at 2565.593 kb on + strand, within eutH at 2565.770 kb on - strand, within eutH at 2565.772 kb on - strand, within eutH at 2565.783 kb on - strand, within eutH at 2565.838 kb on - strand, within eutH at 2565.840 kb on + strand, within eutH at 2565.931 kb on + strand, within eutH at 2565.948 kb on + strand, within eutH at 2565.981 kb on + strand, within eutH at 2565.981 kb on + strand, within eutH at 2566.315 kb on + strand at 2566.315 kb on + strand at 2566.364 kb on + strand at 2566.409 kb on - strand at 2566.431 kb on + strand at 2566.451 kb on - strand at 2566.515 kb on + strand, within eutG at 2566.522 kb on + strand, within eutG at 2566.522 kb on + strand, within eutG at 2566.585 kb on + strand, within eutG at 2566.620 kb on + strand, within eutG at 2566.620 kb on + strand, within eutG at 2566.637 kb on + strand, within eutG at 2566.894 kb on + strand, within eutG at 2566.914 kb on + strand, within eutG at 2566.938 kb on - strand, within eutG at 2566.938 kb on - strand, within eutG at 2566.938 kb on - strand, within eutG at 2567.008 kb on + strand, within eutG at 2567.012 kb on - strand, within eutG at 2567.130 kb on + strand, within eutG at 2567.210 kb on + strand, within eutG at 2567.220 kb on + strand, within eutG at 2567.220 kb on + strand, within eutG at 2567.241 kb on + strand, within eutG at 2567.241 kb on - strand, within eutG at 2567.325 kb on - strand, within eutG at 2567.325 kb on - strand, within eutG at 2567.325 kb on - strand, within eutG at 2567.325 kb on - strand, within eutG at 2567.341 kb on + strand, within eutG at 2567.341 kb on + strand, within eutG at 2567.418 kb on - strand at 2567.595 kb on + strand at 2567.707 kb on + strand, within eutJ at 2567.785 kb on + strand, within eutJ at 2567.785 kb on + strand, within eutJ at 2567.785 kb on + strand, within eutJ at 2567.963 kb on + strand, within eutJ at 2568.118 kb on - strand, within eutJ at 2568.140 kb on - strand, within eutJ at 2568.149 kb on + strand, within eutJ at 2568.149 kb on + strand, within eutJ at 2568.219 kb on + strand, within eutJ at 2568.298 kb on + strand at 2568.338 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction acetate 140 mM remove 2,565,353 - eutH b2452 0.37 -0.1 2,565,416 + eutH b2452 0.42 +0.1 2,565,454 - eutH b2452 0.45 -0.7 2,565,454 - eutH b2452 0.45 -0.1 2,565,593 + eutH b2452 0.56 +1.3 2,565,593 + eutH b2452 0.56 -0.3 2,565,770 - eutH b2452 0.71 +0.6 2,565,772 - eutH b2452 0.71 -0.9 2,565,783 - eutH b2452 0.72 +0.4 2,565,838 - eutH b2452 0.76 -0.3 2,565,840 + eutH b2452 0.76 -1.3 2,565,931 + eutH b2452 0.84 +1.7 2,565,948 + eutH b2452 0.85 -0.9 2,565,981 + eutH b2452 0.88 -0.3 2,565,981 + eutH b2452 0.88 +0.4 2,566,315 + -0.1 2,566,315 + +0.3 2,566,364 + +0.4 2,566,409 - +0.6 2,566,431 + +0.2 2,566,451 - +0.7 2,566,515 + eutG b2453 0.14 -0.3 2,566,522 + eutG b2453 0.15 +0.7 2,566,522 + eutG b2453 0.15 +0.7 2,566,585 + eutG b2453 0.20 +1.1 2,566,620 + eutG b2453 0.23 -1.9 2,566,620 + eutG b2453 0.23 -0.6 2,566,637 + eutG b2453 0.24 -0.2 2,566,894 + eutG b2453 0.46 -0.4 2,566,914 + eutG b2453 0.48 +0.6 2,566,938 - eutG b2453 0.50 -0.9 2,566,938 - eutG b2453 0.50 -0.7 2,566,938 - eutG b2453 0.50 -0.0 2,567,008 + eutG b2453 0.56 +0.3 2,567,012 - eutG b2453 0.56 +2.0 2,567,130 + eutG b2453 0.66 +1.7 2,567,210 + eutG b2453 0.73 -2.1 2,567,220 + eutG b2453 0.74 +0.4 2,567,220 + eutG b2453 0.74 +0.6 2,567,241 + eutG b2453 0.75 -1.5 2,567,241 - eutG b2453 0.75 +0.7 2,567,325 - eutG b2453 0.82 +1.3 2,567,325 - eutG b2453 0.82 -1.9 2,567,325 - eutG b2453 0.82 +0.2 2,567,325 - eutG b2453 0.82 -2.6 2,567,341 + eutG b2453 0.84 +0.1 2,567,341 + eutG b2453 0.84 -0.2 2,567,418 - -0.8 2,567,595 + +0.4 2,567,707 + eutJ b2454 0.22 -0.7 2,567,785 + eutJ b2454 0.31 -0.8 2,567,785 + eutJ b2454 0.31 +0.7 2,567,785 + eutJ b2454 0.31 -1.0 2,567,963 + eutJ b2454 0.53 -0.9 2,568,118 - eutJ b2454 0.71 +0.2 2,568,140 - eutJ b2454 0.74 -2.0 2,568,149 + eutJ b2454 0.75 -0.9 2,568,149 + eutJ b2454 0.75 -0.3 2,568,219 + eutJ b2454 0.83 +0.8 2,568,298 + -0.3 2,568,338 + +0.3
Or see this region's nucleotide sequence