Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_854 and PfGW456L13_855 are separated by 463 nucleotides PfGW456L13_855 and PfGW456L13_856 are separated by 138 nucleotides
PfGW456L13_854 - Argininosuccinate lyase (EC 4.3.2.1), at 959,828 to 961,222
_854
PfGW456L13_855 - Autolysis response regulater LytR, at 961,686 to 962,432
_855
PfGW456L13_856 - Porphobilinogen deaminase (EC 2.5.1.61), at 962,571 to 963,512
_856
Position (kb) 961
962
963 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 961.117 kb on - strand at 961.235 kb on - strand at 961.247 kb on + strand at 961.247 kb on + strand at 961.248 kb on - strand at 961.248 kb on - strand at 961.248 kb on - strand at 961.277 kb on + strand at 961.277 kb on + strand at 961.277 kb on + strand at 961.278 kb on - strand at 961.278 kb on - strand at 961.278 kb on - strand at 961.278 kb on - strand at 961.278 kb on - strand at 961.278 kb on - strand at 961.314 kb on + strand at 961.314 kb on + strand at 961.315 kb on - strand at 961.315 kb on - strand at 961.378 kb on - strand at 961.378 kb on - strand at 961.414 kb on + strand at 961.414 kb on + strand at 961.414 kb on + strand at 961.415 kb on - strand at 961.427 kb on + strand at 961.428 kb on - strand at 961.428 kb on - strand at 961.428 kb on - strand at 961.428 kb on - strand at 961.428 kb on - strand at 961.462 kb on + strand at 961.462 kb on + strand at 961.462 kb on + strand at 961.462 kb on + strand at 961.462 kb on + strand at 961.462 kb on + strand at 961.462 kb on + strand at 961.462 kb on + strand at 961.462 kb on + strand at 961.463 kb on - strand at 961.463 kb on - strand at 961.463 kb on - strand at 961.463 kb on - strand at 961.463 kb on - strand at 961.464 kb on + strand at 961.464 kb on + strand at 961.464 kb on + strand at 961.464 kb on + strand at 961.464 kb on + strand at 961.465 kb on - strand at 961.465 kb on - strand at 961.465 kb on - strand at 961.465 kb on - strand at 961.465 kb on - strand at 961.484 kb on + strand at 961.484 kb on + strand at 961.484 kb on + strand at 961.485 kb on - strand at 961.485 kb on - strand at 961.485 kb on - strand at 961.485 kb on - strand at 961.485 kb on - strand at 961.485 kb on - strand at 961.485 kb on - strand at 961.492 kb on - strand at 961.605 kb on + strand at 961.605 kb on + strand at 961.605 kb on + strand at 961.606 kb on - strand at 961.643 kb on + strand at 961.643 kb on + strand at 961.643 kb on + strand at 961.643 kb on + strand at 961.643 kb on + strand at 961.644 kb on - strand at 961.644 kb on - strand at 961.649 kb on - strand at 961.685 kb on + strand at 961.685 kb on + strand at 961.685 kb on + strand at 961.685 kb on + strand at 961.686 kb on - strand at 961.686 kb on - strand at 961.761 kb on + strand, within PfGW456L13_855 at 961.761 kb on + strand, within PfGW456L13_855 at 961.761 kb on + strand, within PfGW456L13_855 at 961.762 kb on - strand, within PfGW456L13_855 at 961.762 kb on - strand, within PfGW456L13_855 at 961.778 kb on + strand, within PfGW456L13_855 at 961.779 kb on - strand, within PfGW456L13_855 at 961.779 kb on - strand, within PfGW456L13_855 at 961.833 kb on - strand, within PfGW456L13_855 at 961.961 kb on - strand, within PfGW456L13_855 at 961.980 kb on + strand, within PfGW456L13_855 at 961.980 kb on + strand, within PfGW456L13_855 at 961.981 kb on - strand, within PfGW456L13_855 at 961.981 kb on - strand, within PfGW456L13_855 at 961.981 kb on - strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.011 kb on + strand, within PfGW456L13_855 at 962.012 kb on - strand, within PfGW456L13_855 at 962.012 kb on - strand, within PfGW456L13_855 at 962.012 kb on - strand, within PfGW456L13_855 at 962.012 kb on - strand, within PfGW456L13_855 at 962.012 kb on - strand, within PfGW456L13_855 at 962.012 kb on - strand, within PfGW456L13_855 at 962.012 kb on - strand, within PfGW456L13_855 at 962.012 kb on - strand, within PfGW456L13_855 at 962.012 kb on - strand, within PfGW456L13_855 at 962.023 kb on + strand, within PfGW456L13_855 at 962.024 kb on - strand, within PfGW456L13_855 at 962.108 kb on + strand, within PfGW456L13_855 at 962.108 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.163 kb on + strand, within PfGW456L13_855 at 962.164 kb on - strand, within PfGW456L13_855 at 962.164 kb on - strand, within PfGW456L13_855 at 962.184 kb on + strand, within PfGW456L13_855 at 962.184 kb on + strand, within PfGW456L13_855 at 962.184 kb on + strand, within PfGW456L13_855 at 962.184 kb on + strand, within PfGW456L13_855 at 962.184 kb on + strand, within PfGW456L13_855 at 962.184 kb on + strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.185 kb on - strand, within PfGW456L13_855 at 962.273 kb on + strand, within PfGW456L13_855 at 962.273 kb on + strand, within PfGW456L13_855 at 962.273 kb on + strand, within PfGW456L13_855 at 962.274 kb on - strand, within PfGW456L13_855 at 962.274 kb on - strand, within PfGW456L13_855 at 962.274 kb on - strand, within PfGW456L13_855 at 962.306 kb on + strand, within PfGW456L13_855 at 962.407 kb on + strand at 962.430 kb on + strand at 962.496 kb on - strand at 962.496 kb on - strand at 962.496 kb on - strand at 962.498 kb on + strand at 962.498 kb on + strand at 962.506 kb on - strand at 962.528 kb on + strand at 962.528 kb on + strand at 962.529 kb on - strand at 962.529 kb on - strand at 962.529 kb on - strand at 962.529 kb on - strand at 962.529 kb on - strand at 962.529 kb on - strand at 962.529 kb on - strand at 962.535 kb on + strand at 962.536 kb on - strand at 962.536 kb on - strand at 962.536 kb on - strand at 962.547 kb on + strand at 962.547 kb on + strand at 962.547 kb on + strand at 962.547 kb on + strand at 962.547 kb on + strand at 962.547 kb on + strand at 962.551 kb on + strand at 962.558 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 961,117 - -1.2 961,235 - +0.2 961,247 + -1.0 961,247 + -1.8 961,248 - -2.0 961,248 - -1.9 961,248 - +0.2 961,277 + -2.3 961,277 + -2.2 961,277 + -2.5 961,278 - -0.8 961,278 - -1.7 961,278 - -2.0 961,278 - -0.9 961,278 - -1.5 961,278 - -1.4 961,314 + -2.4 961,314 + -1.7 961,315 - +0.5 961,315 - -1.5 961,378 - -0.4 961,378 - -1.6 961,414 + -0.9 961,414 + -1.0 961,414 + -1.7 961,415 - +1.3 961,427 + -2.6 961,428 - +1.1 961,428 - +0.7 961,428 - +0.7 961,428 - -0.6 961,428 - -0.5 961,462 + +0.6 961,462 + -1.4 961,462 + -2.5 961,462 + -1.3 961,462 + -2.2 961,462 + -2.2 961,462 + -1.2 961,462 + -2.2 961,462 + -2.5 961,463 - +0.8 961,463 - +1.6 961,463 - -1.5 961,463 - +1.6 961,463 - -2.1 961,464 + -1.4 961,464 + -3.1 961,464 + -0.6 961,464 + -2.3 961,464 + -1.8 961,465 - +0.9 961,465 - -1.6 961,465 - -2.5 961,465 - -0.5 961,465 - -2.4 961,484 + -0.4 961,484 + -0.3 961,484 + -1.1 961,485 - -1.7 961,485 - -1.2 961,485 - -1.0 961,485 - -2.2 961,485 - -0.4 961,485 - -0.4 961,485 - +1.5 961,492 - -0.8 961,605 + -2.5 961,605 + -2.3 961,605 + -0.5 961,606 - +0.8 961,643 + -0.5 961,643 + -2.7 961,643 + -1.2 961,643 + -0.8 961,643 + -1.4 961,644 - -1.0 961,644 - +2.9 961,649 - -0.6 961,685 + -1.3 961,685 + -1.2 961,685 + +2.9 961,685 + -1.6 961,686 - +0.1 961,686 - +1.1 961,761 + PfGW456L13_855 0.10 -1.9 961,761 + PfGW456L13_855 0.10 -1.4 961,761 + PfGW456L13_855 0.10 -0.6 961,762 - PfGW456L13_855 0.10 -0.6 961,762 - PfGW456L13_855 0.10 -1.3 961,778 + PfGW456L13_855 0.12 +1.8 961,779 - PfGW456L13_855 0.12 +2.0 961,779 - PfGW456L13_855 0.12 +1.0 961,833 - PfGW456L13_855 0.20 -0.8 961,961 - PfGW456L13_855 0.37 +0.9 961,980 + PfGW456L13_855 0.39 -2.4 961,980 + PfGW456L13_855 0.39 -0.9 961,981 - PfGW456L13_855 0.39 -1.9 961,981 - PfGW456L13_855 0.39 +2.0 961,981 - PfGW456L13_855 0.39 +1.4 962,011 + PfGW456L13_855 0.44 -0.8 962,011 + PfGW456L13_855 0.44 +2.8 962,011 + PfGW456L13_855 0.44 -0.1 962,011 + PfGW456L13_855 0.44 -0.8 962,011 + PfGW456L13_855 0.44 +3.7 962,011 + PfGW456L13_855 0.44 -0.8 962,011 + PfGW456L13_855 0.44 +1.4 962,011 + PfGW456L13_855 0.44 +0.9 962,011 + PfGW456L13_855 0.44 +2.4 962,011 + PfGW456L13_855 0.44 +1.8 962,011 + PfGW456L13_855 0.44 +1.8 962,012 - PfGW456L13_855 0.44 +2.4 962,012 - PfGW456L13_855 0.44 +2.5 962,012 - PfGW456L13_855 0.44 +1.6 962,012 - PfGW456L13_855 0.44 +1.6 962,012 - PfGW456L13_855 0.44 +1.8 962,012 - PfGW456L13_855 0.44 -1.6 962,012 - PfGW456L13_855 0.44 -1.3 962,012 - PfGW456L13_855 0.44 -2.0 962,012 - PfGW456L13_855 0.44 -1.4 962,023 + PfGW456L13_855 0.45 -0.1 962,024 - PfGW456L13_855 0.45 +2.2 962,108 + PfGW456L13_855 0.56 +1.8 962,108 + PfGW456L13_855 0.56 +0.7 962,163 + PfGW456L13_855 0.64 +0.8 962,163 + PfGW456L13_855 0.64 +1.4 962,163 + PfGW456L13_855 0.64 +2.7 962,163 + PfGW456L13_855 0.64 -0.8 962,163 + PfGW456L13_855 0.64 +2.1 962,163 + PfGW456L13_855 0.64 +1.8 962,163 + PfGW456L13_855 0.64 -1.2 962,163 + PfGW456L13_855 0.64 +0.2 962,163 + PfGW456L13_855 0.64 -0.1 962,163 + PfGW456L13_855 0.64 +1.1 962,164 - PfGW456L13_855 0.64 +0.1 962,164 - PfGW456L13_855 0.64 +1.5 962,184 + PfGW456L13_855 0.67 +1.5 962,184 + PfGW456L13_855 0.67 +1.9 962,184 + PfGW456L13_855 0.67 +1.5 962,184 + PfGW456L13_855 0.67 -0.6 962,184 + PfGW456L13_855 0.67 -1.9 962,184 + PfGW456L13_855 0.67 +3.4 962,185 - PfGW456L13_855 0.67 +1.3 962,185 - PfGW456L13_855 0.67 +1.1 962,185 - PfGW456L13_855 0.67 +1.6 962,185 - PfGW456L13_855 0.67 -1.7 962,185 - PfGW456L13_855 0.67 -1.0 962,185 - PfGW456L13_855 0.67 +2.0 962,185 - PfGW456L13_855 0.67 +0.2 962,185 - PfGW456L13_855 0.67 +0.7 962,185 - PfGW456L13_855 0.67 -2.2 962,185 - PfGW456L13_855 0.67 +0.9 962,185 - PfGW456L13_855 0.67 +0.1 962,185 - PfGW456L13_855 0.67 -1.0 962,185 - PfGW456L13_855 0.67 -2.9 962,185 - PfGW456L13_855 0.67 -2.0 962,185 - PfGW456L13_855 0.67 -1.5 962,185 - PfGW456L13_855 0.67 +1.9 962,273 + PfGW456L13_855 0.79 -2.2 962,273 + PfGW456L13_855 0.79 +0.6 962,273 + PfGW456L13_855 0.79 +1.4 962,274 - PfGW456L13_855 0.79 +2.6 962,274 - PfGW456L13_855 0.79 -1.4 962,274 - PfGW456L13_855 0.79 -0.2 962,306 + PfGW456L13_855 0.83 -1.4 962,407 + +1.2 962,430 + -0.0 962,496 - +4.9 962,496 - -0.8 962,496 - +5.2 962,498 + -1.3 962,498 + +0.3 962,506 - +3.8 962,528 + +0.1 962,528 + -1.2 962,529 - +0.7 962,529 - -0.6 962,529 - -1.1 962,529 - -2.4 962,529 - -1.1 962,529 - +1.3 962,529 - -0.4 962,535 + +0.5 962,536 - +0.9 962,536 - +1.2 962,536 - +2.8 962,547 + -0.5 962,547 + +0.0 962,547 + +0.0 962,547 + -2.8 962,547 + -1.0 962,547 + -0.6 962,551 + +1.1 962,558 + +3.1
Or see this region's nucleotide sequence