Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_739 and PfGW456L13_740 are separated by 174 nucleotides PfGW456L13_740 and PfGW456L13_741 are separated by 167 nucleotides
PfGW456L13_739 - Transcriptional regulator, AraC family, at 841,902 to 842,894
_739
PfGW456L13_740 - L-asparaginase (EC 3.5.1.1) <small>(from data)</small>, at 843,069 to 844,073
_740
PfGW456L13_741 - sodium/alanine transporter, at 844,241 to 845,692
_741
Position (kb) 843
844
845 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 842.071 kb on + strand, within PfGW456L13_739 at 842.072 kb on - strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.368 kb on + strand, within PfGW456L13_739 at 842.369 kb on - strand, within PfGW456L13_739 at 842.369 kb on - strand, within PfGW456L13_739 at 842.369 kb on - strand, within PfGW456L13_739 at 842.851 kb on - strand at 842.894 kb on + strand at 842.916 kb on - strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.934 kb on + strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.935 kb on - strand at 842.936 kb on + strand at 842.936 kb on + strand at 842.936 kb on + strand at 842.937 kb on - strand at 842.937 kb on - strand at 842.957 kb on + strand at 842.957 kb on + strand at 842.958 kb on - strand at 842.958 kb on - strand at 843.051 kb on + strand at 843.051 kb on + strand at 843.052 kb on - strand at 843.052 kb on - strand at 843.052 kb on - strand at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.229 kb on + strand, within PfGW456L13_740 at 843.230 kb on - strand, within PfGW456L13_740 at 843.230 kb on - strand, within PfGW456L13_740 at 843.355 kb on + strand, within PfGW456L13_740 at 843.472 kb on + strand, within PfGW456L13_740 at 843.472 kb on + strand, within PfGW456L13_740 at 843.472 kb on + strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.473 kb on - strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.601 kb on + strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.602 kb on - strand, within PfGW456L13_740 at 843.682 kb on - strand, within PfGW456L13_740 at 843.763 kb on + strand, within PfGW456L13_740 at 843.763 kb on + strand, within PfGW456L13_740 at 843.856 kb on + strand, within PfGW456L13_740 at 843.856 kb on + strand, within PfGW456L13_740 at 843.856 kb on + strand, within PfGW456L13_740 at 843.857 kb on - strand, within PfGW456L13_740 at 843.946 kb on + strand, within PfGW456L13_740 at 843.946 kb on + strand, within PfGW456L13_740 at 843.946 kb on + strand, within PfGW456L13_740 at 843.947 kb on - strand, within PfGW456L13_740 at 843.947 kb on - strand, within PfGW456L13_740 at 844.007 kb on + strand at 844.027 kb on + strand at 844.027 kb on + strand at 844.027 kb on + strand at 844.028 kb on - strand at 844.028 kb on - strand at 844.028 kb on - strand at 844.028 kb on - strand at 844.057 kb on + strand at 844.057 kb on + strand at 844.058 kb on - strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.129 kb on + strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.130 kb on - strand at 844.144 kb on + strand at 844.144 kb on + strand at 844.144 kb on + strand at 844.144 kb on + strand at 844.144 kb on + strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.145 kb on - strand at 844.202 kb on + strand at 844.235 kb on + strand at 844.235 kb on + strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.236 kb on - strand at 844.260 kb on - strand at 844.398 kb on + strand, within PfGW456L13_741 at 844.398 kb on + strand, within PfGW456L13_741 at 844.399 kb on - strand, within PfGW456L13_741 at 844.399 kb on - strand, within PfGW456L13_741 at 844.399 kb on - strand, within PfGW456L13_741 at 844.399 kb on - strand, within PfGW456L13_741 at 844.542 kb on - strand, within PfGW456L13_741 at 844.614 kb on + strand, within PfGW456L13_741 at 844.614 kb on + strand, within PfGW456L13_741 at 844.614 kb on + strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.615 kb on - strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.617 kb on + strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.618 kb on - strand, within PfGW456L13_741 at 844.749 kb on + strand, within PfGW456L13_741 at 844.749 kb on + strand, within PfGW456L13_741 at 844.749 kb on + strand, within PfGW456L13_741 at 844.749 kb on + strand, within PfGW456L13_741 at 844.933 kb on + strand, within PfGW456L13_741 at 845.030 kb on + strand, within PfGW456L13_741 at 845.030 kb on + strand, within PfGW456L13_741 at 845.030 kb on + strand, within PfGW456L13_741 at 845.031 kb on - strand, within PfGW456L13_741 at 845.031 kb on - strand, within PfGW456L13_741 at 845.031 kb on - strand, within PfGW456L13_741 at 845.031 kb on - strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.040 kb on + strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.041 kb on - strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.058 kb on + strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741 at 845.059 kb on - strand, within PfGW456L13_741
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 842,071 + PfGW456L13_739 0.17 -0.2 842,072 - PfGW456L13_739 0.17 +0.8 842,368 + PfGW456L13_739 0.47 +1.7 842,368 + PfGW456L13_739 0.47 -1.0 842,368 + PfGW456L13_739 0.47 +1.3 842,368 + PfGW456L13_739 0.47 +0.9 842,368 + PfGW456L13_739 0.47 +2.4 842,368 + PfGW456L13_739 0.47 -0.2 842,369 - PfGW456L13_739 0.47 +0.8 842,369 - PfGW456L13_739 0.47 +1.5 842,369 - PfGW456L13_739 0.47 -1.0 842,851 - -2.4 842,894 + +2.0 842,916 - -0.3 842,934 + +2.0 842,934 + +0.1 842,934 + +0.5 842,934 + -2.1 842,934 + -2.2 842,934 + +0.7 842,934 + +3.0 842,934 + +2.3 842,934 + +2.7 842,934 + -0.2 842,935 - +0.9 842,935 - -0.2 842,935 - -0.3 842,935 - +1.0 842,935 - -1.2 842,935 - -0.1 842,935 - +1.1 842,935 - +0.5 842,935 - -2.4 842,935 - -0.6 842,935 - -1.2 842,936 + -2.0 842,936 + +1.9 842,936 + +2.3 842,937 - +0.8 842,937 - +2.1 842,957 + +0.1 842,957 + +0.8 842,958 - -1.0 842,958 - -1.3 843,051 + +0.6 843,051 + +1.6 843,052 - +0.7 843,052 - +1.2 843,052 - +1.0 843,229 + PfGW456L13_740 0.16 -0.7 843,229 + PfGW456L13_740 0.16 +0.4 843,229 + PfGW456L13_740 0.16 +0.3 843,229 + PfGW456L13_740 0.16 +0.3 843,229 + PfGW456L13_740 0.16 +1.4 843,230 - PfGW456L13_740 0.16 -2.8 843,230 - PfGW456L13_740 0.16 +3.1 843,355 + PfGW456L13_740 0.28 -0.5 843,472 + PfGW456L13_740 0.40 +0.8 843,472 + PfGW456L13_740 0.40 +0.5 843,472 + PfGW456L13_740 0.40 -1.1 843,473 - PfGW456L13_740 0.40 -0.3 843,473 - PfGW456L13_740 0.40 -1.1 843,473 - PfGW456L13_740 0.40 -1.1 843,473 - PfGW456L13_740 0.40 +0.9 843,601 + PfGW456L13_740 0.53 +1.8 843,601 + PfGW456L13_740 0.53 +1.0 843,601 + PfGW456L13_740 0.53 +2.4 843,601 + PfGW456L13_740 0.53 +1.2 843,601 + PfGW456L13_740 0.53 +3.7 843,602 - PfGW456L13_740 0.53 -0.8 843,602 - PfGW456L13_740 0.53 +0.2 843,602 - PfGW456L13_740 0.53 +2.4 843,602 - PfGW456L13_740 0.53 +0.7 843,602 - PfGW456L13_740 0.53 +1.8 843,602 - PfGW456L13_740 0.53 +2.0 843,602 - PfGW456L13_740 0.53 +2.0 843,682 - PfGW456L13_740 0.61 -0.3 843,763 + PfGW456L13_740 0.69 +1.9 843,763 + PfGW456L13_740 0.69 +1.3 843,856 + PfGW456L13_740 0.78 +1.7 843,856 + PfGW456L13_740 0.78 -0.3 843,856 + PfGW456L13_740 0.78 -1.4 843,857 - PfGW456L13_740 0.78 -1.3 843,946 + PfGW456L13_740 0.87 -0.5 843,946 + PfGW456L13_740 0.87 +0.2 843,946 + PfGW456L13_740 0.87 +1.3 843,947 - PfGW456L13_740 0.87 +0.2 843,947 - PfGW456L13_740 0.87 +0.9 844,007 + +2.8 844,027 + +1.8 844,027 + -0.3 844,027 + +0.6 844,028 - +0.2 844,028 - +0.1 844,028 - +0.1 844,028 - +0.5 844,057 + +1.4 844,057 + -0.6 844,058 - -0.9 844,129 + +1.5 844,129 + -0.9 844,129 + +0.7 844,129 + +2.4 844,129 + +0.5 844,129 + +1.1 844,129 + +1.2 844,129 + +0.5 844,130 - -1.0 844,130 - -0.4 844,130 - +0.8 844,130 - -2.1 844,130 - -0.7 844,130 - -0.6 844,130 - -1.1 844,130 - +0.2 844,130 - +0.7 844,144 + +1.4 844,144 + +1.6 844,144 + -3.0 844,144 + -0.3 844,144 + +0.8 844,145 - +1.0 844,145 - -0.8 844,145 - +1.0 844,145 - +0.9 844,145 - +0.1 844,145 - +1.5 844,145 - -1.8 844,202 + -0.1 844,235 + -1.7 844,235 + -0.3 844,236 - -0.1 844,236 - +1.0 844,236 - +0.0 844,236 - -2.2 844,236 - +1.0 844,236 - +1.2 844,236 - -1.3 844,236 - -3.2 844,260 - +0.9 844,398 + PfGW456L13_741 0.11 -0.1 844,398 + PfGW456L13_741 0.11 +1.0 844,399 - PfGW456L13_741 0.11 -1.1 844,399 - PfGW456L13_741 0.11 +2.2 844,399 - PfGW456L13_741 0.11 +0.7 844,399 - PfGW456L13_741 0.11 +0.6 844,542 - PfGW456L13_741 0.21 +1.2 844,614 + PfGW456L13_741 0.26 +1.3 844,614 + PfGW456L13_741 0.26 +1.1 844,614 + PfGW456L13_741 0.26 +2.2 844,615 - PfGW456L13_741 0.26 -0.3 844,615 - PfGW456L13_741 0.26 -2.0 844,615 - PfGW456L13_741 0.26 -0.4 844,615 - PfGW456L13_741 0.26 -0.7 844,615 - PfGW456L13_741 0.26 -2.7 844,617 + PfGW456L13_741 0.26 +0.2 844,617 + PfGW456L13_741 0.26 +1.5 844,617 + PfGW456L13_741 0.26 +0.9 844,617 + PfGW456L13_741 0.26 +0.5 844,617 + PfGW456L13_741 0.26 -2.9 844,617 + PfGW456L13_741 0.26 +0.3 844,617 + PfGW456L13_741 0.26 +2.6 844,617 + PfGW456L13_741 0.26 +2.4 844,617 + PfGW456L13_741 0.26 -0.3 844,617 + PfGW456L13_741 0.26 +1.6 844,617 + PfGW456L13_741 0.26 +0.3 844,617 + PfGW456L13_741 0.26 -1.1 844,617 + PfGW456L13_741 0.26 +0.8 844,617 + PfGW456L13_741 0.26 +1.1 844,617 + PfGW456L13_741 0.26 +0.5 844,617 + PfGW456L13_741 0.26 +1.0 844,617 + PfGW456L13_741 0.26 +0.4 844,617 + PfGW456L13_741 0.26 -0.6 844,617 + PfGW456L13_741 0.26 +1.1 844,617 + PfGW456L13_741 0.26 +2.2 844,618 - PfGW456L13_741 0.26 +1.5 844,618 - PfGW456L13_741 0.26 -0.9 844,618 - PfGW456L13_741 0.26 -0.3 844,618 - +2.1 844,618 - PfGW456L13_741 0.26 +1.2 844,618 - PfGW456L13_741 0.26 +1.1 844,618 - PfGW456L13_741 0.26 -1.6 844,618 - PfGW456L13_741 0.26 +1.3 844,618 - PfGW456L13_741 0.26 -2.3 844,618 - PfGW456L13_741 0.26 +3.7 844,618 - PfGW456L13_741 0.26 -2.4 844,618 - PfGW456L13_741 0.26 -0.0 844,618 - PfGW456L13_741 0.26 +0.8 844,618 - PfGW456L13_741 0.26 +0.8 844,749 + PfGW456L13_741 0.35 -2.0 844,749 + PfGW456L13_741 0.35 +0.7 844,749 + PfGW456L13_741 0.35 +0.5 844,749 + PfGW456L13_741 0.35 +1.9 844,933 + PfGW456L13_741 0.48 +0.4 845,030 + PfGW456L13_741 0.54 +1.9 845,030 + PfGW456L13_741 0.54 +1.1 845,030 + PfGW456L13_741 0.54 +2.4 845,031 - PfGW456L13_741 0.54 +0.8 845,031 - PfGW456L13_741 0.54 +0.3 845,031 - PfGW456L13_741 0.54 -0.1 845,031 - PfGW456L13_741 0.54 +1.2 845,040 + PfGW456L13_741 0.55 +2.1 845,040 + PfGW456L13_741 0.55 +2.9 845,040 + PfGW456L13_741 0.55 -0.1 845,040 + PfGW456L13_741 0.55 -0.5 845,040 + PfGW456L13_741 0.55 -1.3 845,040 + PfGW456L13_741 0.55 -0.3 845,041 - PfGW456L13_741 0.55 +1.0 845,041 - PfGW456L13_741 0.55 -0.1 845,041 - PfGW456L13_741 0.55 +1.0 845,041 - PfGW456L13_741 0.55 +1.8 845,041 - PfGW456L13_741 0.55 +1.2 845,041 - PfGW456L13_741 0.55 +0.5 845,041 - PfGW456L13_741 0.55 -1.9 845,041 - PfGW456L13_741 0.55 +0.9 845,041 - PfGW456L13_741 0.55 -0.1 845,041 - PfGW456L13_741 0.55 -1.2 845,041 - PfGW456L13_741 0.55 +2.5 845,058 + PfGW456L13_741 0.56 +0.4 845,058 + PfGW456L13_741 0.56 +1.7 845,058 + PfGW456L13_741 0.56 +1.8 845,058 + PfGW456L13_741 0.56 +1.7 845,058 + PfGW456L13_741 0.56 +1.5 845,058 + PfGW456L13_741 0.56 +1.3 845,058 + PfGW456L13_741 0.56 -1.4 845,058 + PfGW456L13_741 0.56 +1.3 845,058 + PfGW456L13_741 0.56 -1.7 845,059 - PfGW456L13_741 0.56 -1.6 845,059 - PfGW456L13_741 0.56 -3.0 845,059 - PfGW456L13_741 0.56 +1.8 845,059 - PfGW456L13_741 0.56 +0.5 845,059 - PfGW456L13_741 0.56 -2.2
Or see this region's nucleotide sequence