Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_577 and PfGW456L13_578 are separated by 189 nucleotides PfGW456L13_578 and PfGW456L13_579 are separated by 54 nucleotides PfGW456L13_579 and PfGW456L13_580 are separated by 105 nucleotides PfGW456L13_580 and PfGW456L13_581 are separated by 328 nucleotides PfGW456L13_581 and PfGW456L13_582 overlap by 23 nucleotides
PfGW456L13_577 - Fused spore maturation proteins A and B, at 670,929 to 672,158
_577
PfGW456L13_578 - Glutamate-aspartate carrier protein, at 672,348 to 673,679
_578
PfGW456L13_579 - hypothetical protein, at 673,734 to 673,859
_579
PfGW456L13_580 - hypothetical protein, at 673,965 to 674,096
_580
PfGW456L13_581 - hypothetical protein, at 674,425 to 674,538
_581
PfGW456L13_582 - probable exported protein YPO0432, at 674,516 to 674,680
_582
Position (kb) 672
673
674 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 671.377 kb on + strand, within PfGW456L13_577 at 671.377 kb on + strand, within PfGW456L13_577 at 671.377 kb on + strand, within PfGW456L13_577 at 671.378 kb on - strand, within PfGW456L13_577 at 671.539 kb on + strand, within PfGW456L13_577 at 671.539 kb on + strand, within PfGW456L13_577 at 671.680 kb on + strand, within PfGW456L13_577 at 671.680 kb on + strand, within PfGW456L13_577 at 671.680 kb on + strand, within PfGW456L13_577 at 671.681 kb on - strand, within PfGW456L13_577 at 671.730 kb on + strand, within PfGW456L13_577 at 671.731 kb on - strand, within PfGW456L13_577 at 671.855 kb on + strand, within PfGW456L13_577 at 671.855 kb on + strand, within PfGW456L13_577 at 671.856 kb on - strand, within PfGW456L13_577 at 671.856 kb on - strand, within PfGW456L13_577 at 672.115 kb on - strand at 672.115 kb on - strand at 672.241 kb on + strand at 672.241 kb on + strand at 672.242 kb on - strand at 672.242 kb on - strand at 672.242 kb on - strand at 672.242 kb on - strand at 672.439 kb on + strand at 672.439 kb on + strand at 672.439 kb on + strand at 672.439 kb on + strand at 672.440 kb on - strand at 672.440 kb on - strand at 672.440 kb on - strand at 672.440 kb on - strand at 672.564 kb on - strand, within PfGW456L13_578 at 672.591 kb on + strand, within PfGW456L13_578 at 672.613 kb on - strand, within PfGW456L13_578 at 672.691 kb on + strand, within PfGW456L13_578 at 672.692 kb on - strand, within PfGW456L13_578 at 672.692 kb on - strand, within PfGW456L13_578 at 672.692 kb on - strand, within PfGW456L13_578 at 672.859 kb on + strand, within PfGW456L13_578 at 672.860 kb on - strand, within PfGW456L13_578 at 672.860 kb on - strand, within PfGW456L13_578 at 672.860 kb on - strand, within PfGW456L13_578 at 672.860 kb on - strand, within PfGW456L13_578 at 672.867 kb on + strand, within PfGW456L13_578 at 672.868 kb on - strand, within PfGW456L13_578 at 672.971 kb on - strand, within PfGW456L13_578 at 672.971 kb on - strand, within PfGW456L13_578 at 672.971 kb on - strand, within PfGW456L13_578 at 673.066 kb on + strand, within PfGW456L13_578 at 673.066 kb on + strand, within PfGW456L13_578 at 673.066 kb on + strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578 at 673.067 kb on - strand, within PfGW456L13_578 at 673.179 kb on + strand, within PfGW456L13_578 at 673.179 kb on + strand, within PfGW456L13_578 at 673.179 kb on + strand, within PfGW456L13_578 at 673.179 kb on + strand, within PfGW456L13_578 at 673.180 kb on - strand, within PfGW456L13_578 at 673.180 kb on - strand, within PfGW456L13_578 at 673.180 kb on - strand, within PfGW456L13_578 at 673.180 kb on - strand, within PfGW456L13_578 at 673.180 kb on - strand, within PfGW456L13_578 at 673.306 kb on + strand, within PfGW456L13_578 at 673.306 kb on + strand, within PfGW456L13_578 at 673.306 kb on + strand, within PfGW456L13_578 at 673.307 kb on - strand, within PfGW456L13_578 at 673.307 kb on - strand, within PfGW456L13_578 at 673.307 kb on - strand, within PfGW456L13_578 at 673.307 kb on - strand, within PfGW456L13_578 at 673.420 kb on + strand, within PfGW456L13_578 at 673.420 kb on + strand, within PfGW456L13_578 at 673.421 kb on - strand, within PfGW456L13_578 at 673.421 kb on - strand, within PfGW456L13_578 at 673.421 kb on - strand, within PfGW456L13_578 at 673.421 kb on - strand, within PfGW456L13_578 at 673.421 kb on - strand, within PfGW456L13_578 at 673.421 kb on - strand, within PfGW456L13_578 at 673.541 kb on + strand, within PfGW456L13_578 at 673.630 kb on - strand at 673.661 kb on + strand at 673.661 kb on + strand at 673.679 kb on + strand at 673.680 kb on - strand at 673.680 kb on - strand at 673.680 kb on - strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.691 kb on + strand at 673.692 kb on - strand at 673.692 kb on - strand at 673.692 kb on - strand at 673.692 kb on - strand at 673.692 kb on - strand at 673.692 kb on - strand at 673.692 kb on - strand at 673.692 kb on - strand at 673.692 kb on - strand at 673.692 kb on - strand at 673.767 kb on - strand, within PfGW456L13_579 at 673.767 kb on - strand, within PfGW456L13_579 at 673.767 kb on - strand, within PfGW456L13_579 at 673.768 kb on + strand, within PfGW456L13_579 at 673.768 kb on + strand, within PfGW456L13_579 at 673.768 kb on + strand, within PfGW456L13_579 at 673.768 kb on + strand, within PfGW456L13_579 at 673.768 kb on + strand, within PfGW456L13_579 at 673.768 kb on + strand, within PfGW456L13_579 at 673.769 kb on - strand, within PfGW456L13_579 at 673.769 kb on - strand, within PfGW456L13_579 at 673.769 kb on - strand, within PfGW456L13_579 at 673.769 kb on - strand, within PfGW456L13_579 at 673.769 kb on - strand, within PfGW456L13_579 at 673.769 kb on - strand, within PfGW456L13_579 at 673.769 kb on - strand, within PfGW456L13_579 at 673.769 kb on - strand, within PfGW456L13_579 at 673.769 kb on - strand, within PfGW456L13_579 at 673.825 kb on - strand, within PfGW456L13_579 at 673.825 kb on - strand, within PfGW456L13_579 at 673.849 kb on + strand at 673.850 kb on - strand at 673.865 kb on + strand at 673.865 kb on + strand at 673.926 kb on + strand at 673.926 kb on + strand at 673.945 kb on + strand at 673.945 kb on + strand at 673.945 kb on + strand at 673.945 kb on + strand at 673.945 kb on + strand at 673.945 kb on + strand at 673.945 kb on + strand at 673.946 kb on - strand at 673.946 kb on - strand at 673.946 kb on - strand at 673.946 kb on - strand at 673.946 kb on - strand at 673.946 kb on - strand at 673.946 kb on - strand at 673.982 kb on + strand, within PfGW456L13_580 at 674.075 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.077 kb on + strand, within PfGW456L13_580 at 674.078 kb on - strand, within PfGW456L13_580 at 674.078 kb on - strand, within PfGW456L13_580 at 674.078 kb on - strand, within PfGW456L13_580 at 674.078 kb on - strand, within PfGW456L13_580 at 674.078 kb on - strand, within PfGW456L13_580 at 674.078 kb on - strand, within PfGW456L13_580 at 674.078 kb on - strand, within PfGW456L13_580 at 674.078 kb on - strand, within PfGW456L13_580 at 674.118 kb on + strand at 674.118 kb on + strand at 674.118 kb on + strand at 674.119 kb on - strand at 674.119 kb on - strand at 674.119 kb on - strand at 674.119 kb on - strand at 674.119 kb on - strand at 674.168 kb on - strand at 674.269 kb on + strand at 674.269 kb on + strand at 674.269 kb on + strand at 674.270 kb on - strand at 674.270 kb on - strand at 674.270 kb on - strand at 674.270 kb on - strand at 674.284 kb on + strand at 674.284 kb on + strand at 674.284 kb on + strand at 674.285 kb on - strand at 674.285 kb on - strand at 674.285 kb on - strand at 674.361 kb on + strand at 674.361 kb on + strand at 674.361 kb on + strand at 674.361 kb on + strand at 674.361 kb on + strand at 674.362 kb on - strand at 674.388 kb on + strand at 674.402 kb on + strand at 674.403 kb on - strand at 674.514 kb on + strand, within PfGW456L13_581 at 674.515 kb on - strand, within PfGW456L13_581 at 674.615 kb on - strand, within PfGW456L13_582 at 674.630 kb on + strand, within PfGW456L13_582
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 671,377 + PfGW456L13_577 0.36 -0.9 671,377 + PfGW456L13_577 0.36 -1.3 671,377 + PfGW456L13_577 0.36 -3.1 671,378 - PfGW456L13_577 0.37 -0.2 671,539 + PfGW456L13_577 0.50 -2.1 671,539 + PfGW456L13_577 0.50 +0.7 671,680 + PfGW456L13_577 0.61 -1.5 671,680 + PfGW456L13_577 0.61 -0.5 671,680 + PfGW456L13_577 0.61 -1.9 671,681 - PfGW456L13_577 0.61 +0.7 671,730 + PfGW456L13_577 0.65 -1.0 671,731 - PfGW456L13_577 0.65 -1.2 671,855 + PfGW456L13_577 0.75 -0.5 671,855 + PfGW456L13_577 0.75 -0.8 671,856 - PfGW456L13_577 0.75 -1.4 671,856 - PfGW456L13_577 0.75 -2.0 672,115 - -1.6 672,115 - -3.0 672,241 + +1.5 672,241 + +0.7 672,242 - +0.2 672,242 - -1.4 672,242 - -0.5 672,242 - -0.0 672,439 + +1.9 672,439 + +3.2 672,439 + +1.8 672,439 + -0.8 672,440 - +0.5 672,440 - +1.4 672,440 - +0.8 672,440 - +3.3 672,564 - PfGW456L13_578 0.16 -1.2 672,591 + PfGW456L13_578 0.18 +2.8 672,613 - PfGW456L13_578 0.20 -0.0 672,691 + PfGW456L13_578 0.26 +1.8 672,692 - PfGW456L13_578 0.26 +2.1 672,692 - PfGW456L13_578 0.26 +1.3 672,692 - PfGW456L13_578 0.26 +0.1 672,859 + PfGW456L13_578 0.38 +2.3 672,860 - PfGW456L13_578 0.38 +2.2 672,860 - PfGW456L13_578 0.38 -0.3 672,860 - PfGW456L13_578 0.38 -1.1 672,860 - PfGW456L13_578 0.38 +0.5 672,867 + PfGW456L13_578 0.39 +2.5 672,868 - PfGW456L13_578 0.39 +1.5 672,971 - PfGW456L13_578 0.47 -1.8 672,971 - PfGW456L13_578 0.47 +2.3 672,971 - PfGW456L13_578 0.47 +1.0 673,066 + PfGW456L13_578 0.54 +1.6 673,066 + PfGW456L13_578 0.54 +2.7 673,066 + PfGW456L13_578 0.54 +2.3 673,067 - PfGW456L13_578 0.54 +3.3 673,067 - PfGW456L13_578 0.54 +3.0 673,067 - PfGW456L13_578 0.54 +1.0 673,067 - PfGW456L13_578 0.54 +1.3 673,067 - PfGW456L13_578 0.54 +0.9 673,179 + PfGW456L13_578 0.62 +2.3 673,179 + PfGW456L13_578 0.62 +2.2 673,179 + PfGW456L13_578 0.62 -0.8 673,179 + PfGW456L13_578 0.62 +2.8 673,180 - PfGW456L13_578 0.62 +3.7 673,180 - PfGW456L13_578 0.62 +2.8 673,180 - PfGW456L13_578 0.62 +2.0 673,180 - PfGW456L13_578 0.62 +0.8 673,180 - PfGW456L13_578 0.62 +3.2 673,306 + PfGW456L13_578 0.72 +1.7 673,306 + PfGW456L13_578 0.72 +2.4 673,306 + PfGW456L13_578 0.72 -1.0 673,307 - PfGW456L13_578 0.72 +2.7 673,307 - PfGW456L13_578 0.72 +2.8 673,307 - PfGW456L13_578 0.72 +1.7 673,307 - PfGW456L13_578 0.72 +2.7 673,420 + PfGW456L13_578 0.80 +1.5 673,420 + PfGW456L13_578 0.80 +1.8 673,421 - PfGW456L13_578 0.81 +1.9 673,421 - PfGW456L13_578 0.81 -0.4 673,421 - PfGW456L13_578 0.81 +0.6 673,421 - PfGW456L13_578 0.81 +2.7 673,421 - PfGW456L13_578 0.81 +1.5 673,421 - PfGW456L13_578 0.81 +2.5 673,541 + PfGW456L13_578 0.90 +3.0 673,630 - -1.1 673,661 + -0.9 673,661 + +2.0 673,679 + +2.5 673,680 - +0.7 673,680 - -1.0 673,680 - +2.4 673,691 + +3.9 673,691 + +2.6 673,691 + +2.1 673,691 + -1.0 673,691 + +3.6 673,691 + +2.1 673,691 + +2.4 673,691 + +1.1 673,691 + -1.0 673,691 + +2.3 673,691 + +3.1 673,691 + +1.3 673,692 - -0.5 673,692 - +0.5 673,692 - +0.2 673,692 - +2.7 673,692 - -0.2 673,692 - +1.3 673,692 - +3.5 673,692 - +2.5 673,692 - +0.2 673,692 - +1.7 673,767 - PfGW456L13_579 0.26 +0.3 673,767 - PfGW456L13_579 0.26 -1.5 673,767 - PfGW456L13_579 0.26 -0.6 673,768 + PfGW456L13_579 0.27 +1.1 673,768 + PfGW456L13_579 0.27 +3.5 673,768 + PfGW456L13_579 0.27 -0.2 673,768 + PfGW456L13_579 0.27 +2.0 673,768 + PfGW456L13_579 0.27 +2.4 673,768 + PfGW456L13_579 0.27 +2.6 673,769 - PfGW456L13_579 0.28 -1.6 673,769 - PfGW456L13_579 0.28 +0.6 673,769 - PfGW456L13_579 0.28 -2.5 673,769 - PfGW456L13_579 0.28 -1.7 673,769 - PfGW456L13_579 0.28 +2.1 673,769 - PfGW456L13_579 0.28 -0.7 673,769 - PfGW456L13_579 0.28 -1.8 673,769 - PfGW456L13_579 0.28 -2.5 673,769 - PfGW456L13_579 0.28 -1.4 673,825 - PfGW456L13_579 0.72 +2.0 673,825 - PfGW456L13_579 0.72 +0.8 673,849 + +1.5 673,850 - -1.5 673,865 + +2.5 673,865 + +2.6 673,926 + +0.1 673,926 + +1.4 673,945 + +1.0 673,945 + -1.0 673,945 + -1.9 673,945 + -0.9 673,945 + -0.5 673,945 + +2.1 673,945 + -1.2 673,946 - -1.3 673,946 - -1.0 673,946 - -2.5 673,946 - -1.9 673,946 - -1.6 673,946 - -0.4 673,946 - -1.6 673,982 + PfGW456L13_580 0.13 +1.5 674,075 + PfGW456L13_580 0.83 -2.1 674,077 + PfGW456L13_580 0.85 -1.6 674,077 + PfGW456L13_580 0.85 -0.9 674,077 + PfGW456L13_580 0.85 -2.2 674,077 + PfGW456L13_580 0.85 -2.2 674,077 + PfGW456L13_580 0.85 -1.9 674,077 + PfGW456L13_580 0.85 -0.5 674,077 + PfGW456L13_580 0.85 -1.3 674,077 + PfGW456L13_580 0.85 +0.6 674,077 + PfGW456L13_580 0.85 +0.7 674,077 + PfGW456L13_580 0.85 -1.2 674,078 - PfGW456L13_580 0.86 +3.0 674,078 - PfGW456L13_580 0.86 -1.0 674,078 - PfGW456L13_580 0.86 -1.8 674,078 - PfGW456L13_580 0.86 -2.1 674,078 - PfGW456L13_580 0.86 -2.5 674,078 - PfGW456L13_580 0.86 -0.6 674,078 - PfGW456L13_580 0.86 -1.7 674,078 - PfGW456L13_580 0.86 -1.8 674,118 + -2.9 674,118 + +0.2 674,118 + -1.5 674,119 - +1.5 674,119 - +0.9 674,119 - +2.7 674,119 - -1.0 674,119 - +0.7 674,168 - +1.5 674,269 + -0.5 674,269 + -1.0 674,269 + -1.7 674,270 - -0.8 674,270 - +1.6 674,270 - +1.3 674,270 - +2.1 674,284 + -0.7 674,284 + +1.1 674,284 + -3.0 674,285 - +2.0 674,285 - +1.1 674,285 - +0.5 674,361 + -1.3 674,361 + -0.2 674,361 + -0.4 674,361 + -1.4 674,361 + -2.1 674,362 - +0.3 674,388 + -0.7 674,402 + -2.6 674,403 - -1.4 674,514 + PfGW456L13_581 0.78 -2.9 674,515 - PfGW456L13_581 0.79 -0.9 674,615 - PfGW456L13_582 0.60 +1.0 674,630 + PfGW456L13_582 0.69 -1.4
Or see this region's nucleotide sequence