Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3083

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
3,433,436	+		PfGW456L13_3082	0.49	+0.4
3,433,436	+		PfGW456L13_3082	0.49	-0.0
3,433,436	+		PfGW456L13_3082	0.49	+1.0
3,433,436	+		PfGW456L13_3082	0.49	+1.8
3,433,436	+		PfGW456L13_3082	0.49	-2.4
3,433,437	-		PfGW456L13_3082	0.49	-0.5
3,433,437	-		PfGW456L13_3082	0.49	+1.3
3,433,437	-		PfGW456L13_3082	0.49	+0.6
3,433,437	-		PfGW456L13_3082	0.49	+0.4
3,433,437	-		PfGW456L13_3082	0.49	-1.1
3,433,555	+		PfGW456L13_3082	0.56	-2.4
3,433,555	+		PfGW456L13_3082	0.56	-0.3
3,433,662	+		PfGW456L13_3082	0.63	+0.1
3,433,662	+		PfGW456L13_3082	0.63	+0.7
3,433,662	+		PfGW456L13_3082	0.63	+0.0
3,433,662	+		PfGW456L13_3082	0.63	+0.3
3,433,663	-		PfGW456L13_3082	0.63	-1.3
3,433,663	-		PfGW456L13_3082	0.63	+1.0
3,433,766	+		PfGW456L13_3082	0.69	+0.3
3,433,899	-		PfGW456L13_3082	0.77	-0.1
3,433,930	+		PfGW456L13_3082	0.78	-0.5
3,433,933	+		PfGW456L13_3082	0.79	+0.1
3,433,933	+		PfGW456L13_3082	0.79	-1.2
3,433,933	+		PfGW456L13_3082	0.79	+0.5
3,433,934	-		PfGW456L13_3082	0.79	-0.7
3,433,934	-		PfGW456L13_3082	0.79	-0.2
3,433,934	-		PfGW456L13_3082	0.79	-1.3
3,433,934	-		PfGW456L13_3082	0.79	+2.3
3,433,934	-		PfGW456L13_3082	0.79	+0.9
3,433,989	+		PfGW456L13_3082	0.82	+2.5
3,433,989	+		PfGW456L13_3082	0.82	-1.5
3,433,989	+		PfGW456L13_3082	0.82	+1.7
3,433,989	+		PfGW456L13_3082	0.82	-0.6
3,433,990	-		PfGW456L13_3082	0.82	-0.7
3,433,990	-		PfGW456L13_3082	0.82	+1.6
3,433,990	-		PfGW456L13_3082	0.82	-0.4
3,434,071	+		PfGW456L13_3082	0.87	+1.6
3,434,071	+		PfGW456L13_3082	0.87	-1.8
3,434,071	+		PfGW456L13_3082	0.87	-0.1
3,434,072	-		PfGW456L13_3082	0.87	-0.6
3,434,072	-		PfGW456L13_3082	0.87	-0.0
3,434,072	-		PfGW456L13_3082	0.87	-2.8
3,434,072	-		PfGW456L13_3082	0.87	+1.2
3,434,117	+		PfGW456L13_3082	0.89	+1.6
3,434,171	+				+1.1
3,434,172	-				-1.6
3,434,172	-				+0.4
3,434,178	-				-2.2
3,434,263	+				-1.6
3,434,361	+				-0.1
3,434,361	+				-0.1
3,434,361	+				-1.7
3,434,361	+				+1.1
3,434,361	+				-1.0
3,434,362	-				-0.7
3,434,362	-				+2.3
3,434,362	-				-0.5
3,434,362	-				-1.6
3,434,362	-				-2.0
3,434,362	-				+2.0
3,434,362	-				-0.3
3,434,362	-				+0.5
3,434,362	-				+1.6
3,434,408	+				-0.6
3,434,409	-				+2.6
3,434,409	-				+0.8
3,434,409	-				-0.6
3,434,409	-				+1.3
3,434,414	+				+0.9
3,434,428	+				-1.2
3,434,428	+				-0.1
3,434,429	-				+0.6
3,434,477	+				+0.6
3,434,477	+				+0.1
3,434,478	-				+2.0
3,434,478	-				+0.4
3,434,478	-				+0.0
3,434,483	+				-1.0
3,434,483	+				+1.7
3,434,484	-				-2.3
3,434,693	+		PfGW456L13_3083	0.16	-1.4
3,434,747	-		PfGW456L13_3083	0.19	-0.1
3,434,773	+		PfGW456L13_3083	0.20	-0.4
3,434,778	-		PfGW456L13_3083	0.20	+1.0
3,434,778	-		PfGW456L13_3083	0.20	-0.9
3,434,909	+		PfGW456L13_3083	0.28	-1.7
3,434,910	-		PfGW456L13_3083	0.28	+1.0
3,434,921	+		PfGW456L13_3083	0.28	+0.1
3,434,922	-		PfGW456L13_3083	0.28	-1.3
3,434,922	-		PfGW456L13_3083	0.28	-1.1
3,435,095	+		PfGW456L13_3083	0.38	+0.0
3,435,095	+		PfGW456L13_3083	0.38	-0.9
3,435,095	+		PfGW456L13_3083	0.38	+0.0
3,435,095	+		PfGW456L13_3083	0.38	+0.7
3,435,096	-		PfGW456L13_3083	0.38	+0.7
3,435,096	-		PfGW456L13_3083	0.38	-2.3
3,435,096	-				+2.6
3,435,096	-		PfGW456L13_3083	0.38	-0.2
3,435,096	-		PfGW456L13_3083	0.38	+0.3
3,435,272	+		PfGW456L13_3083	0.47	+0.8
3,435,272	+		PfGW456L13_3083	0.47	-1.9
3,435,389	+		PfGW456L13_3083	0.53	+1.3
3,435,389	+		PfGW456L13_3083	0.53	+1.1
3,435,561	-		PfGW456L13_3083	0.63	+0.6
3,435,608	+		PfGW456L13_3083	0.65	+2.6
3,435,608	+		PfGW456L13_3083	0.65	+1.5
3,435,609	-		PfGW456L13_3083	0.65	-1.6
3,435,609	-		PfGW456L13_3083	0.65	+1.8
3,435,704	+		PfGW456L13_3083	0.70	-0.9
3,435,704	+		PfGW456L13_3083	0.70	-0.7
3,435,704	+		PfGW456L13_3083	0.70	-1.5
3,435,704	+		PfGW456L13_3083	0.70	+2.3
3,435,704	+		PfGW456L13_3083	0.70	-0.2
3,435,704	+		PfGW456L13_3083	0.70	+0.6
3,435,705	-		PfGW456L13_3083	0.70	-1.3
3,435,705	-		PfGW456L13_3083	0.70	+0.7
3,435,705	-		PfGW456L13_3083	0.70	+0.8
3,435,705	-		PfGW456L13_3083	0.70	+0.6
3,435,734	-		PfGW456L13_3083	0.72	+1.6
3,435,734	-		PfGW456L13_3083	0.72	+0.1
3,435,734	-		PfGW456L13_3083	0.72	+0.6
3,435,780	+		PfGW456L13_3083	0.74	-0.9
3,435,893	-		PfGW456L13_3083	0.81	+3.0
3,435,893	-		PfGW456L13_3083	0.81	-0.2
3,436,027	+		PfGW456L13_3083	0.88	+1.5
3,436,028	-		PfGW456L13_3083	0.88	+2.1
3,436,329	+				-2.0
3,436,437	+		PfGW456L13_3084	0.28	-1.3
3,436,437	+		PfGW456L13_3084	0.28	+2.5
3,436,438	-		PfGW456L13_3084	0.28	-2.2
3,436,438	-		PfGW456L13_3084	0.28	+0.2
3,436,496	+		PfGW456L13_3084	0.54	+1.6
3,436,496	+		PfGW456L13_3084	0.54	+1.0
3,436,496	+		PfGW456L13_3084	0.54	+0.9
3,436,497	-		PfGW456L13_3084	0.54	+2.5
3,436,497	-		PfGW456L13_3084	0.54	-0.8
3,436,599	+				-0.6
3,436,600	-				+1.2
3,436,613	-				+1.3
3,436,613	-				-0.4
3,436,694	-				+1.7
3,436,710	-				-0.2
3,436,715	-				+0.3
3,436,715	-				-0.2
3,436,729	+				-1.8
3,436,729	+				+2.4
3,436,730	-				-0.6
3,436,842	+				+1.9
3,436,843	-				-1.6
3,436,843	-				-1.2
3,436,843	-				-0.3
3,436,846	-				-0.0
3,436,846	-				+0.3
3,436,846	-				+3.3
3,436,938	-				-0.8
3,437,022	+		PfGW456L13_3085	0.13	-0.1
3,437,022	+		PfGW456L13_3085	0.13	+2.4
3,437,022	+		PfGW456L13_3085	0.13	+0.5
3,437,022	+		PfGW456L13_3085	0.13	-2.0
3,437,023	-		PfGW456L13_3085	0.13	-0.2