Experiment: octanoate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_224 and PfGW456L13_225 are separated by 142 nucleotides PfGW456L13_225 and PfGW456L13_226 are separated by 100 nucleotides PfGW456L13_226 and PfGW456L13_227 overlap by 4 nucleotides
PfGW456L13_224 - Acyl-CoA dehydrogenase (EC 1.3.8.7), at 264,690 to 266,492
_224
PfGW456L13_225 - Methyl-accepting chemotaxis protein, at 266,635 to 268,572
_225
PfGW456L13_226 - FIG00959437: hypothetical protein, at 268,673 to 268,975
_226
PfGW456L13_227 - FIG00958420: hypothetical protein, at 268,972 to 269,202
_227
Position (kb) 266
267
268
269 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 265.644 kb on + strand, within PfGW456L13_224 at 265.759 kb on - strand, within PfGW456L13_224 at 265.759 kb on - strand, within PfGW456L13_224 at 265.759 kb on - strand, within PfGW456L13_224 at 265.867 kb on + strand, within PfGW456L13_224 at 265.867 kb on + strand, within PfGW456L13_224 at 265.868 kb on - strand, within PfGW456L13_224 at 265.953 kb on + strand, within PfGW456L13_224 at 265.954 kb on - strand, within PfGW456L13_224 at 265.966 kb on - strand, within PfGW456L13_224 at 265.966 kb on - strand, within PfGW456L13_224 at 265.980 kb on + strand, within PfGW456L13_224 at 265.981 kb on - strand, within PfGW456L13_224 at 265.981 kb on - strand, within PfGW456L13_224 at 265.981 kb on - strand, within PfGW456L13_224 at 265.981 kb on - strand, within PfGW456L13_224 at 266.367 kb on + strand at 266.367 kb on + strand at 266.367 kb on + strand at 266.367 kb on + strand at 266.367 kb on + strand at 266.368 kb on - strand at 266.368 kb on - strand at 266.368 kb on - strand at 266.368 kb on - strand at 266.369 kb on + strand at 266.369 kb on + strand at 266.394 kb on + strand at 266.510 kb on - strand at 266.510 kb on - strand at 266.622 kb on + strand at 266.622 kb on + strand at 266.622 kb on + strand at 266.623 kb on - strand at 266.625 kb on + strand at 266.626 kb on - strand at 266.626 kb on - strand at 266.626 kb on - strand at 266.626 kb on - strand at 266.626 kb on - strand at 266.631 kb on + strand at 266.631 kb on + strand at 266.631 kb on + strand at 266.631 kb on + strand at 266.631 kb on + strand at 266.631 kb on + strand at 266.631 kb on + strand at 266.631 kb on + strand at 266.631 kb on + strand at 266.632 kb on - strand at 266.632 kb on - strand at 266.632 kb on - strand at 266.632 kb on - strand at 266.632 kb on - strand at 266.632 kb on - strand at 266.632 kb on - strand at 266.632 kb on - strand at 266.632 kb on - strand at 266.856 kb on + strand, within PfGW456L13_225 at 266.994 kb on + strand, within PfGW456L13_225 at 266.994 kb on + strand, within PfGW456L13_225 at 266.994 kb on + strand, within PfGW456L13_225 at 266.995 kb on - strand, within PfGW456L13_225 at 267.007 kb on - strand, within PfGW456L13_225 at 267.553 kb on + strand, within PfGW456L13_225 at 267.554 kb on - strand, within PfGW456L13_225 at 267.554 kb on - strand, within PfGW456L13_225 at 267.607 kb on + strand, within PfGW456L13_225 at 267.608 kb on - strand, within PfGW456L13_225 at 267.725 kb on + strand, within PfGW456L13_225 at 267.725 kb on + strand, within PfGW456L13_225 at 267.953 kb on + strand, within PfGW456L13_225 at 267.954 kb on - strand, within PfGW456L13_225 at 267.954 kb on - strand, within PfGW456L13_225 at 268.148 kb on + strand, within PfGW456L13_225 at 268.148 kb on + strand, within PfGW456L13_225 at 268.149 kb on - strand, within PfGW456L13_225 at 268.149 kb on - strand, within PfGW456L13_225 at 268.211 kb on + strand, within PfGW456L13_225 at 268.211 kb on + strand, within PfGW456L13_225 at 268.211 kb on + strand, within PfGW456L13_225 at 268.211 kb on + strand, within PfGW456L13_225 at 268.211 kb on + strand, within PfGW456L13_225 at 268.212 kb on - strand, within PfGW456L13_225 at 268.212 kb on - strand, within PfGW456L13_225 at 268.212 kb on - strand, within PfGW456L13_225 at 268.212 kb on - strand, within PfGW456L13_225 at 268.212 kb on - strand, within PfGW456L13_225 at 268.280 kb on + strand, within PfGW456L13_225 at 268.372 kb on - strand, within PfGW456L13_225 at 268.448 kb on + strand at 268.448 kb on + strand at 268.448 kb on + strand at 268.448 kb on + strand at 268.448 kb on + strand at 268.448 kb on + strand at 268.448 kb on + strand at 268.448 kb on + strand at 268.449 kb on - strand at 268.449 kb on - strand at 268.481 kb on + strand at 268.481 kb on + strand at 268.481 kb on + strand at 268.481 kb on + strand at 268.481 kb on + strand at 268.481 kb on + strand at 268.481 kb on + strand at 268.482 kb on - strand at 268.482 kb on - strand at 268.482 kb on - strand at 268.482 kb on - strand at 268.482 kb on - strand at 268.482 kb on - strand at 268.482 kb on - strand at 268.482 kb on - strand at 268.503 kb on + strand at 268.504 kb on - strand at 268.552 kb on - strand at 268.590 kb on + strand at 268.590 kb on + strand at 268.590 kb on + strand at 268.590 kb on + strand at 268.590 kb on + strand at 268.590 kb on + strand at 268.590 kb on + strand at 268.591 kb on - strand at 268.833 kb on + strand, within PfGW456L13_226 at 268.834 kb on - strand, within PfGW456L13_226 at 268.924 kb on - strand, within PfGW456L13_226 at 268.968 kb on + strand at 268.968 kb on + strand at 268.969 kb on - strand at 269.235 kb on - strand at 269.268 kb on + strand at 269.269 kb on - strand at 269.270 kb on + strand at 269.321 kb on + strand at 269.321 kb on + strand at 269.321 kb on + strand at 269.321 kb on + strand at 269.321 kb on + strand at 269.321 kb on + strand at 269.322 kb on - strand at 269.322 kb on - strand at 269.322 kb on - strand at 269.322 kb on - strand at 269.333 kb on + strand at 269.368 kb on + strand at 269.369 kb on - strand at 269.369 kb on - strand at 269.369 kb on - strand at 269.369 kb on - strand at 269.369 kb on - strand at 269.369 kb on - strand at 269.372 kb on + strand at 269.372 kb on + strand at 269.372 kb on + strand at 269.372 kb on + strand at 269.372 kb on + strand at 269.372 kb on + strand at 269.373 kb on - strand at 269.373 kb on - strand at 269.373 kb on - strand at 269.373 kb on - strand at 269.373 kb on - strand at 269.373 kb on - strand at 269.466 kb on + strand at 269.466 kb on + strand at 269.466 kb on + strand at 269.467 kb on - strand at 269.467 kb on - strand at 269.467 kb on - strand at 269.467 kb on - strand at 269.467 kb on - strand at 269.473 kb on + strand at 269.474 kb on - strand at 269.491 kb on - strand at 269.542 kb on + strand at 269.542 kb on + strand at 269.542 kb on + strand at 269.542 kb on + strand at 269.542 kb on + strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand at 269.543 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction octanoate (C) remove 265,644 + PfGW456L13_224 0.53 +0.8 265,759 - PfGW456L13_224 0.59 +0.6 265,759 - PfGW456L13_224 0.59 -0.5 265,759 - PfGW456L13_224 0.59 +1.4 265,867 + PfGW456L13_224 0.65 +0.0 265,867 + PfGW456L13_224 0.65 +0.7 265,868 - PfGW456L13_224 0.65 +1.1 265,953 + PfGW456L13_224 0.70 +1.4 265,954 - PfGW456L13_224 0.70 +1.8 265,966 - PfGW456L13_224 0.71 +0.0 265,966 - PfGW456L13_224 0.71 -0.5 265,980 + PfGW456L13_224 0.72 -1.8 265,981 - PfGW456L13_224 0.72 +1.0 265,981 - PfGW456L13_224 0.72 -0.4 265,981 - PfGW456L13_224 0.72 -1.4 265,981 - PfGW456L13_224 0.72 +1.2 266,367 + +1.9 266,367 + -2.2 266,367 + -2.1 266,367 + +1.5 266,367 + -0.3 266,368 - +0.2 266,368 - -1.3 266,368 - -0.3 266,368 - -0.3 266,369 + +2.9 266,369 + -2.2 266,394 + -2.9 266,510 - +0.3 266,510 - +1.2 266,622 + -1.0 266,622 + +0.2 266,622 + +0.0 266,623 - -0.0 266,625 + +0.2 266,626 - +0.8 266,626 - -2.9 266,626 - +0.7 266,626 - -0.9 266,626 - -0.4 266,631 + -1.6 266,631 + -1.3 266,631 + +1.8 266,631 + -2.2 266,631 + +0.2 266,631 + +2.2 266,631 + +1.3 266,631 + -1.2 266,631 + +1.1 266,632 - -1.8 266,632 - -2.4 266,632 - +1.0 266,632 - +1.0 266,632 - +1.3 266,632 - +1.1 266,632 - -0.8 266,632 - -2.0 266,632 - -2.1 266,856 + PfGW456L13_225 0.11 -0.8 266,994 + PfGW456L13_225 0.19 -0.5 266,994 + PfGW456L13_225 0.19 +0.4 266,994 + PfGW456L13_225 0.19 +0.0 266,995 - PfGW456L13_225 0.19 -0.6 267,007 - PfGW456L13_225 0.19 +0.2 267,553 + PfGW456L13_225 0.47 -0.4 267,554 - PfGW456L13_225 0.47 -1.5 267,554 - PfGW456L13_225 0.47 +0.8 267,607 + PfGW456L13_225 0.50 -1.2 267,608 - PfGW456L13_225 0.50 -1.9 267,725 + PfGW456L13_225 0.56 +0.2 267,725 + PfGW456L13_225 0.56 -0.2 267,953 + PfGW456L13_225 0.68 -1.3 267,954 - PfGW456L13_225 0.68 -0.8 267,954 - PfGW456L13_225 0.68 -0.3 268,148 + PfGW456L13_225 0.78 -0.8 268,148 + PfGW456L13_225 0.78 -1.9 268,149 - PfGW456L13_225 0.78 -1.8 268,149 - PfGW456L13_225 0.78 -0.4 268,211 + PfGW456L13_225 0.81 -2.1 268,211 + PfGW456L13_225 0.81 +2.0 268,211 + PfGW456L13_225 0.81 +0.2 268,211 + PfGW456L13_225 0.81 -1.7 268,211 + PfGW456L13_225 0.81 -1.0 268,212 - PfGW456L13_225 0.81 -3.5 268,212 - PfGW456L13_225 0.81 -0.2 268,212 - PfGW456L13_225 0.81 -1.6 268,212 - PfGW456L13_225 0.81 -1.4 268,212 - PfGW456L13_225 0.81 -1.8 268,280 + PfGW456L13_225 0.85 -1.2 268,372 - PfGW456L13_225 0.90 +0.0 268,448 + +1.4 268,448 + +2.2 268,448 + +0.8 268,448 + +1.7 268,448 + +0.3 268,448 + +1.1 268,448 + +0.1 268,448 + -0.3 268,449 - -0.7 268,449 - +0.3 268,481 + +0.8 268,481 + -0.1 268,481 + +0.6 268,481 + +1.0 268,481 + +1.3 268,481 + -0.0 268,481 + -1.3 268,482 - +1.9 268,482 - -2.2 268,482 - +0.2 268,482 - +0.1 268,482 - -0.0 268,482 - +0.8 268,482 - +1.2 268,482 - +1.9 268,503 + +1.1 268,504 - +1.3 268,552 - +1.1 268,590 + -0.1 268,590 + +0.6 268,590 + +0.0 268,590 + -1.9 268,590 + -1.2 268,590 + -1.8 268,590 + -0.2 268,591 - +1.2 268,833 + PfGW456L13_226 0.53 -1.2 268,834 - PfGW456L13_226 0.53 +1.8 268,924 - PfGW456L13_226 0.83 +0.7 268,968 + -0.5 268,968 + +0.8 268,969 - +0.1 269,235 - -0.8 269,268 + +0.0 269,269 - +2.7 269,270 + -1.8 269,321 + -2.1 269,321 + -1.7 269,321 + -0.8 269,321 + +0.8 269,321 + -0.5 269,321 + -0.4 269,322 - -1.0 269,322 - +1.8 269,322 - +0.6 269,322 - +2.0 269,333 + -2.2 269,368 + -1.2 269,369 - -1.2 269,369 - +1.0 269,369 - +1.4 269,369 - +0.4 269,369 - -2.3 269,369 - +1.5 269,372 + +2.1 269,372 + +0.5 269,372 + -1.4 269,372 + +0.7 269,372 + -0.7 269,372 + -3.5 269,373 - -1.7 269,373 - +1.0 269,373 - +0.3 269,373 - +0.4 269,373 - -0.5 269,373 - -0.6 269,466 + -2.2 269,466 + -1.2 269,466 + +1.1 269,467 - -1.2 269,467 - +0.6 269,467 - +1.6 269,467 - +0.1 269,467 - +1.1 269,473 + +0.9 269,474 - +0.3 269,491 - +0.6 269,542 + +1.6 269,542 + -1.5 269,542 + -0.8 269,542 + +2.0 269,542 + +1.9 269,543 - -1.5 269,543 - +0.5 269,543 - -0.1 269,543 - +0.8 269,543 - +1.7 269,543 - +3.0 269,543 - +0.1 269,543 - +1.9 269,543 - -2.3 269,543 - -1.6 269,543 - +0.9 269,543 - -2.1
Or see this region's nucleotide sequence