Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1779

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,959,906	+				-0.8
1,959,906	+				-1.0
1,959,906	+				-0.0
1,959,907	-				+1.5
1,959,914	-				+1.7
1,959,928	+				-0.6
1,959,928	+				+3.1
1,959,928	+				-0.7
1,959,929	-				+1.6
1,959,929	-				+0.1
1,959,929	-				+1.0
1,959,929	-				-0.9
1,959,929	-				-1.7
1,959,929	-				-0.5
1,959,943	+				+2.0
1,959,943	+				-1.6
1,959,943	+				-2.2
1,959,943	+				-1.4
1,959,944	-				+1.6
1,959,944	-				+0.6
1,959,944	-				-1.4
1,959,944	-				+1.3
1,959,944	-				+0.7
1,959,944	-				-0.4
1,959,944	-				+1.6
1,959,944	-				+1.4
1,959,944	-				+1.5
1,959,944	-				-0.6
1,959,944	-				+0.3
1,959,944	-				-1.6
1,959,944	-				-0.1
1,959,947	+				-0.4
1,959,948	-				+0.9
1,959,968	+				-1.0
1,959,968	+				+0.6
1,959,968	+				+1.7
1,959,968	+				+2.4
1,959,968	+				-0.8
1,959,968	+				-0.1
1,959,968	+				-0.2
1,959,968	+				-1.8
1,959,968	+				-1.4
1,959,968	+				-1.8
1,959,968	+				-0.9
1,959,968	+				-1.6
1,959,968	+				+0.2
1,959,968	+				+2.0
1,959,968	+				-1.9
1,959,969	-				+0.1
1,959,969	-				-2.0
1,959,969	-				+2.6
1,959,969	-				+0.5
1,959,969	-				+1.2
1,959,969	-				+0.5
1,959,969	-				+0.6
1,959,969	-				-0.7
1,959,969	-				+0.6
1,959,969	-				-1.2
1,959,969	-				+1.1
1,959,969	-				-0.0
1,959,969	-				+1.9
1,959,969	-				-0.2
1,959,969	-				-1.2
1,959,969	-				+1.3
1,959,969	-				-0.4
1,959,969	-				+0.0
1,959,969	-				-2.2
1,959,972	+				-2.0
1,959,973	-				+1.4
1,959,973	-				-1.3
1,960,007	-				+2.2
1,960,031	-				+1.6
1,960,031	-				+0.9
1,960,031	-				-0.0
1,960,031	-				-0.7
1,960,143	+				+1.4
1,960,143	+				-0.4
1,960,143	+				-1.6
1,960,143	+				+1.4
1,960,143	+				-0.8
1,960,143	+				-0.1
1,960,143	+				+0.4
1,960,143	+				+2.2
1,960,143	+				-1.5
1,960,143	+				-0.3
1,960,143	+				+1.0
1,960,143	+				+1.8
1,960,143	+				+1.2
1,960,143	+				+0.8
1,960,143	+				-1.3
1,960,143	+				-1.8
1,960,144	+				-1.1
1,960,144	-				+2.2
1,960,144	-				+1.2
1,960,144	-				-1.7
1,960,144	-				-1.6
1,960,144	-				-1.4
1,960,144	-				-2.3
1,960,144	-				-0.4
1,960,144	-				+0.2
1,960,184	+				-0.1
1,960,184	+				-2.3
1,960,185	-				+0.7
1,960,198	+				+1.4
1,960,198	+				+0.3
1,960,232	+				+1.4
1,960,232	+				-0.5
1,960,232	+				+0.4
1,960,232	+				-0.2
1,960,232	+				+0.3
1,960,232	+				+0.8
1,960,232	+				-0.4
1,960,233	-				+0.5
1,960,233	-				-0.4
1,960,233	-				+0.3
1,960,233	-				-2.1
1,960,233	-				+1.0
1,960,233	-				-2.6
1,960,233	-				+1.6
1,960,275	+				+0.8
1,960,275	+				+1.6
1,960,275	+				-2.2
1,960,275	+				-0.9
1,960,275	+				+1.2
1,960,275	+				+0.6
1,960,275	+				-2.2
1,960,275	+				-0.0
1,960,275	+				-0.2
1,960,275	+				-0.1
1,960,275	+				-0.2
1,960,275	+				+2.3
1,960,276	-				-0.9
1,960,276	-				+1.7
1,960,276	-				-1.3
1,960,276	-				+1.3
1,960,276	-				+1.0
1,960,276	-				+0.0
1,960,276	-				+0.1
1,960,276	-				+1.8
1,960,276	-				-0.1
1,960,351	+				+1.7
1,960,351	+				-0.6
1,960,368	+				-0.8
1,960,368	+				-0.7
1,960,368	+				-0.6
1,960,368	+				-0.1
1,960,368	+				+0.3
1,960,387	-				+0.1
1,960,387	-				+1.0
1,960,602	+				-0.4
1,960,602	+				+1.2
1,960,603	-				+0.0
1,960,603	-				+1.5
1,960,729	+				-2.5
1,960,729	+				+0.2
1,960,729	+				+0.6
1,960,730	-				-1.4
1,960,730	-				+2.5
1,960,730	-				-0.3
1,960,787	-				-0.9
1,961,460	-				+0.2
1,961,460	-				-2.0
1,961,460	-				-1.3
1,961,489	-				-1.5
1,961,489	-				-0.1
1,961,489	-				-2.3
1,961,489	-				-0.4
1,961,507	+				-1.7
1,961,531	+				+1.9
1,961,531	+				-1.2
1,961,705	+		PfGW456L13_1780	0.26	+1.4
1,961,712	+		PfGW456L13_1780	0.28	+1.4
1,961,712	+		PfGW456L13_1780	0.28	-0.0
1,961,712	+		PfGW456L13_1780	0.28	-0.3
1,961,712	+		PfGW456L13_1780	0.28	-1.2
1,961,713	-		PfGW456L13_1780	0.28	+0.8
1,961,713	-		PfGW456L13_1780	0.28	-0.2
1,961,713	-		PfGW456L13_1780	0.28	-0.8
1,961,772	+		PfGW456L13_1780	0.37	+1.0
1,961,772	+		PfGW456L13_1780	0.37	+0.9
1,961,773	-		PfGW456L13_1780	0.38	-0.5
1,961,773	-		PfGW456L13_1780	0.38	-0.4
1,961,773	-		PfGW456L13_1780	0.38	-1.4
1,961,834	+		PfGW456L13_1780	0.48	-0.8
1,961,834	+		PfGW456L13_1780	0.48	-0.6
1,961,835	-		PfGW456L13_1780	0.48	-1.1
1,961,835	-		PfGW456L13_1780	0.48	-0.6
1,961,835	-		PfGW456L13_1780	0.48	-1.5
1,961,835	-		PfGW456L13_1780	0.48	-0.3
1,961,835	-		PfGW456L13_1780	0.48	-1.0
1,961,902	-		PfGW456L13_1780	0.59	-1.2
1,962,135	+				-0.3
1,962,135	+				+2.0
1,962,136	-				-2.4
1,962,136	-				+1.2
1,962,237	+		PfGW456L13_1781	0.20	-1.9
1,962,237	+		PfGW456L13_1781	0.20	+0.4
1,962,238	-		PfGW456L13_1781	0.21	+0.6
1,962,238	-		PfGW456L13_1781	0.21	-0.6
1,962,238	-		PfGW456L13_1781	0.21	-2.8
1,962,238	-		PfGW456L13_1781	0.21	-1.0
1,962,238	-		PfGW456L13_1781	0.21	+1.4
1,962,238	-		PfGW456L13_1781	0.21	+0.5
1,962,329	+		PfGW456L13_1781	0.43	+0.9
1,962,329	+		PfGW456L13_1781	0.43	+0.8
1,962,330	-		PfGW456L13_1781	0.44	-1.2
1,962,330	-		PfGW456L13_1781	0.44	-2.5
1,962,330	-		PfGW456L13_1781	0.44	-0.8
1,962,330	-		PfGW456L13_1781	0.44	-0.8
1,962,357	+		PfGW456L13_1781	0.50	+0.6
1,962,357	+		PfGW456L13_1781	0.50	+2.2
1,962,357	+		PfGW456L13_1781	0.50	+2.5
1,962,357	+		PfGW456L13_1781	0.50	-0.7
1,962,358	-		PfGW456L13_1781	0.50	+0.5
1,962,358	-		PfGW456L13_1781	0.50	-2.2
1,962,358	-		PfGW456L13_1781	0.50	-0.4