Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1543

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,696,289	+				-1.1
1,696,290	-				-2.7
1,696,502	+		PfGW456L13_1542	0.27	+2.0
1,696,502	+		PfGW456L13_1542	0.27	+0.7
1,696,503	-		PfGW456L13_1542	0.27	-0.9
1,696,503	-		PfGW456L13_1542	0.27	+1.0
1,696,503	-		PfGW456L13_1542	0.27	-0.3
1,696,514	+		PfGW456L13_1542	0.28	+0.4
1,696,619	+		PfGW456L13_1542	0.39	+1.0
1,696,620	-		PfGW456L13_1542	0.39	-1.7
1,696,847	+		PfGW456L13_1542	0.61	+0.2
1,696,847	+		PfGW456L13_1542	0.61	-2.6
1,696,847	+		PfGW456L13_1542	0.61	+0.1
1,696,847	+		PfGW456L13_1542	0.61	+0.3
1,696,848	-		PfGW456L13_1542	0.61	-0.3
1,696,848	-		PfGW456L13_1542	0.61	+1.0
1,696,848	-		PfGW456L13_1542	0.61	-2.4
1,696,910	+		PfGW456L13_1542	0.67	-0.4
1,696,910	+		PfGW456L13_1542	0.67	-1.0
1,696,910	+		PfGW456L13_1542	0.67	+0.2
1,696,911	-		PfGW456L13_1542	0.68	-2.4
1,696,911	-		PfGW456L13_1542	0.68	+0.5
1,696,911	-		PfGW456L13_1542	0.68	-2.2
1,696,928	-		PfGW456L13_1542	0.69	-1.0
1,696,970	+		PfGW456L13_1542	0.73	+1.7
1,696,971	-		PfGW456L13_1542	0.73	+0.5
1,697,044	+		PfGW456L13_1542	0.81	+1.7
1,697,044	+		PfGW456L13_1542	0.81	-0.5
1,697,044	+		PfGW456L13_1542	0.81	-2.0
1,697,045	-		PfGW456L13_1542	0.81	+0.1
1,697,060	+		PfGW456L13_1542	0.82	+0.5
1,697,060	+		PfGW456L13_1542	0.82	-1.3
1,697,060	+		PfGW456L13_1542	0.82	-2.0
1,697,061	-		PfGW456L13_1542	0.82	+1.1
1,697,069	+		PfGW456L13_1542	0.83	+0.4
1,697,070	-		PfGW456L13_1542	0.83	-2.5
1,697,205	+				+0.1
1,697,205	+				-1.0
1,697,205	+				-1.3
1,697,205	+				-2.2
1,697,206	-				-2.5
1,697,206	-				+2.0
1,697,206	-				+0.2
1,697,206	-				+0.5
1,697,206	-				+0.2
1,697,206	-				-1.5
1,697,206	-				+1.0
1,697,206	-				+0.3
1,697,206	-				+0.5
1,697,206	-				-1.3
1,697,206	-				-0.5
1,697,206	-				-0.1
1,697,206	-				-1.3
1,697,206	-				-1.9
1,697,207	+				-0.5
1,697,207	+				+2.2
1,697,207	+				-0.3
1,697,207	+				+0.7
1,697,207	+				-1.8
1,697,207	+				-0.8
1,697,207	+				-1.5
1,697,207	+				-0.7
1,697,208	-				-1.9
1,697,208	-				-1.5
1,697,208	-				-0.6
1,697,208	-				-1.5
1,697,208	-				-0.5
1,697,209	+				-0.1
1,697,209	+				-0.9
1,697,209	+				+0.5
1,697,209	+				-2.1
1,697,209	+				+1.2
1,697,209	+				+1.9
1,697,209	+				+0.8
1,697,210	-				-2.0
1,697,210	-				-1.7
1,697,210	-				-1.1
1,697,210	-				-2.4
1,697,210	-				-1.3
1,697,210	-				+0.9
1,697,234	+				-2.4
1,697,234	+				+0.8
1,697,235	-				-0.1
1,697,305	+		PfGW456L13_1543	0.11	-0.2
1,697,305	+		PfGW456L13_1543	0.11	-2.7
1,697,393	+		PfGW456L13_1543	0.25	+1.2
1,697,393	+		PfGW456L13_1543	0.25	+0.3
1,697,393	+		PfGW456L13_1543	0.25	+1.9
1,697,393	+		PfGW456L13_1543	0.25	+1.0
1,697,394	-		PfGW456L13_1543	0.25	-1.0
1,697,482	+		PfGW456L13_1543	0.39	-3.2
1,697,482	+		PfGW456L13_1543	0.39	-1.3
1,697,482	+		PfGW456L13_1543	0.39	-0.4
1,697,482	+		PfGW456L13_1543	0.39	-1.0
1,697,483	-		PfGW456L13_1543	0.39	-0.8
1,697,483	-		PfGW456L13_1543	0.39	+0.5
1,697,483	-		PfGW456L13_1543	0.39	+1.0
1,697,502	+		PfGW456L13_1543	0.42	-0.1
1,697,503	-		PfGW456L13_1543	0.43	-1.2
1,697,506	+		PfGW456L13_1543	0.43	+0.6
1,697,506	+		PfGW456L13_1543	0.43	-0.3
1,697,507	-		PfGW456L13_1543	0.43	+0.2
1,697,507	-		PfGW456L13_1543	0.43	-0.4
1,697,507	-		PfGW456L13_1543	0.43	-0.3
1,697,507	-		PfGW456L13_1543	0.43	-2.0
1,697,569	+		PfGW456L13_1543	0.53	-1.1
1,697,569	+		PfGW456L13_1543	0.53	+0.0
1,697,569	+		PfGW456L13_1543	0.53	-1.3
1,697,569	+		PfGW456L13_1543	0.53	+0.6
1,697,569	+		PfGW456L13_1543	0.53	+2.2
1,697,569	+		PfGW456L13_1543	0.53	-0.5
1,697,570	-		PfGW456L13_1543	0.53	-0.1
1,697,570	-		PfGW456L13_1543	0.53	-0.1
1,697,574	+		PfGW456L13_1543	0.54	+0.2
1,697,574	+		PfGW456L13_1543	0.54	-2.9
1,697,574	+		PfGW456L13_1543	0.54	+2.5
1,697,574	+		PfGW456L13_1543	0.54	-2.2
1,697,575	-		PfGW456L13_1543	0.54	-1.0
1,697,575	-		PfGW456L13_1543	0.54	-0.3
1,697,575	-		PfGW456L13_1543	0.54	+1.0
1,697,633	-		PfGW456L13_1543	0.63	-0.8
1,697,705	+		PfGW456L13_1543	0.75	+0.5
1,697,705	+		PfGW456L13_1543	0.75	-0.5
1,697,712	+		PfGW456L13_1543	0.76	+0.5
1,697,712	+		PfGW456L13_1543	0.76	+0.2
1,697,712	+		PfGW456L13_1543	0.76	+2.3
1,697,712	+		PfGW456L13_1543	0.76	-0.7
1,697,712	+		PfGW456L13_1543	0.76	-1.1
1,697,713	-		PfGW456L13_1543	0.76	+0.2
1,697,713	-		PfGW456L13_1543	0.76	+0.2
1,697,713	-		PfGW456L13_1543	0.76	-0.3
1,697,713	-		PfGW456L13_1543	0.76	+2.0
1,697,713	-		PfGW456L13_1543	0.76	-1.0
1,697,755	+		PfGW456L13_1543	0.83	+0.0
1,697,755	+		PfGW456L13_1543	0.83	-1.6
1,697,755	+		PfGW456L13_1543	0.83	+0.2
1,697,755	+		PfGW456L13_1543	0.83	+1.0
1,697,755	+		PfGW456L13_1543	0.83	+0.7
1,697,755	+		PfGW456L13_1543	0.83	+0.0
1,697,755	+		PfGW456L13_1543	0.83	-2.0
1,697,755	+		PfGW456L13_1543	0.83	-2.4
1,697,755	+		PfGW456L13_1543	0.83	+0.5
1,697,755	+		PfGW456L13_1543	0.83	-0.7
1,697,755	+		PfGW456L13_1543	0.83	-1.5
1,697,755	+		PfGW456L13_1543	0.83	-1.2
1,697,755	+		PfGW456L13_1543	0.83	-0.4
1,697,755	+		PfGW456L13_1543	0.83	+0.5
1,697,755	+		PfGW456L13_1543	0.83	+0.8
1,697,755	+		PfGW456L13_1543	0.83	-1.8
1,697,755	+		PfGW456L13_1543	0.83	-1.0
1,697,755	+		PfGW456L13_1543	0.83	-1.0
1,697,755	+		PfGW456L13_1543	0.83	-1.8
1,697,755	+		PfGW456L13_1543	0.83	-0.5
1,697,755	+		PfGW456L13_1543	0.83	-0.8
1,697,755	+		PfGW456L13_1543	0.83	-1.5
1,697,756	-		PfGW456L13_1543	0.83	-0.4
1,697,756	-		PfGW456L13_1543	0.83	-0.8
1,697,756	-		PfGW456L13_1543	0.83	+0.5
1,697,756	-		PfGW456L13_1543	0.83	-1.2
1,697,756	-		PfGW456L13_1543	0.83	-1.3
1,697,756	-		PfGW456L13_1543	0.83	-0.9
1,697,756	-		PfGW456L13_1543	0.83	-1.0
1,697,756	-		PfGW456L13_1543	0.83	+0.5
1,697,756	-		PfGW456L13_1543	0.83	+0.5
1,697,756	-		PfGW456L13_1543	0.83	-1.6
1,697,756	-		PfGW456L13_1543	0.83	+1.5
1,697,756	-		PfGW456L13_1543	0.83	-1.3
1,697,756	-		PfGW456L13_1543	0.83	-1.6
1,697,756	-		PfGW456L13_1543	0.83	+3.8
1,697,763	+		PfGW456L13_1543	0.84	+1.5
1,697,763	+		PfGW456L13_1543	0.84	-0.7
1,697,763	+		PfGW456L13_1543	0.84	+0.2
1,697,763	+		PfGW456L13_1543	0.84	-1.0
1,697,763	+		PfGW456L13_1543	0.84	+0.8
1,697,763	+		PfGW456L13_1543	0.84	-0.6
1,697,763	+		PfGW456L13_1543	0.84	+0.5
1,697,763	+		PfGW456L13_1543	0.84	-0.5
1,697,764	-		PfGW456L13_1543	0.85	+0.2
1,697,764	-		PfGW456L13_1543	0.85	-2.0
1,697,764	-		PfGW456L13_1543	0.85	+0.5
1,697,764	-		PfGW456L13_1543	0.85	+0.8
1,697,764	-		PfGW456L13_1543	0.85	-1.0
1,697,765	+		PfGW456L13_1543	0.85	+0.3
1,697,765	+		PfGW456L13_1543	0.85	-1.0
1,697,765	+		PfGW456L13_1543	0.85	-1.9
1,697,765	+		PfGW456L13_1543	0.85	+0.9
1,697,765	+		PfGW456L13_1543	0.85	-0.6
1,697,765	+		PfGW456L13_1543	0.85	-1.0
1,697,766	-		PfGW456L13_1543	0.85	-2.5
1,697,766	-		PfGW456L13_1543	0.85	-0.7
1,697,766	-		PfGW456L13_1543	0.85	-0.3
1,697,766	-		PfGW456L13_1543	0.85	+0.5
1,697,780	+		PfGW456L13_1543	0.87	+1.1
1,697,781	-		PfGW456L13_1543	0.87	-0.9
1,697,822	+				+1.3
1,697,823	-				-1.3
1,697,861	+				-0.9
1,697,861	+				-2.3
1,697,862	-				-1.3
1,697,892	-				-0.5
1,698,806	+		PfGW456L13_5183	0.29	-1.5