Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1397

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,543,987	+		PfGW456L13_1396	0.17	-1.3
1,543,988	-		PfGW456L13_1396	0.17	-1.5
1,543,988	-		PfGW456L13_1396	0.17	-1.4
1,543,988	-		PfGW456L13_1396	0.17	-0.1
1,543,988	-		PfGW456L13_1396	0.17	+1.2
1,543,988	-		PfGW456L13_1396	0.17	+0.7
1,544,128	+		PfGW456L13_1396	0.33	+1.0
1,544,128	+		PfGW456L13_1396	0.33	-0.5
1,544,128	+		PfGW456L13_1396	0.33	+0.2
1,544,128	+		PfGW456L13_1396	0.33	+0.5
1,544,128	+		PfGW456L13_1396	0.33	+0.3
1,544,129	-		PfGW456L13_1396	0.33	-1.5
1,544,129	-		PfGW456L13_1396	0.33	+1.2
1,544,129	-		PfGW456L13_1396	0.33	-0.6
1,544,237	-		PfGW456L13_1396	0.45	-0.2
1,544,296	+		PfGW456L13_1396	0.51	+0.3
1,544,297	-		PfGW456L13_1396	0.51	-2.0
1,544,422	+		PfGW456L13_1396	0.65	-1.8
1,544,422	+		PfGW456L13_1396	0.65	+2.7
1,544,423	-		PfGW456L13_1396	0.65	-1.6
1,544,662	+				+0.6
1,544,662	+				-1.9
1,544,662	+				+1.9
1,544,662	+				-0.2
1,544,662	+				+0.1
1,544,662	+				+1.5
1,544,662	+				+1.4
1,544,662	+				+0.8
1,544,662	-				-1.3
1,544,663	-				-1.1
1,544,663	-				+0.4
1,544,663	-				+1.1
1,544,663	-				-0.6
1,544,663	-				+1.2
1,544,663	-				-1.3
1,544,663	-				-0.0
1,544,716	+				+0.1
1,544,716	+				-0.9
1,544,716	+				+1.4
1,544,716	+				+1.9
1,544,717	-				+1.5
1,544,717	-				+0.3
1,544,717	-				+1.0
1,544,717	-				+1.6
1,544,737	+				+2.6
1,544,839	+				-1.0
1,544,871	+				-0.6
1,544,872	-				+0.4
1,544,875	+				+2.8
1,544,876	-				-2.1
1,544,944	+				+3.2
1,544,945	-				+2.8
1,544,990	+				-0.9
1,545,157	-		PfGW456L13_1397	0.12	+1.1
1,545,157	-		PfGW456L13_1397	0.12	-0.9
1,545,317	+		PfGW456L13_1397	0.23	-0.1
1,545,317	+		PfGW456L13_1397	0.23	+2.1
1,545,317	+		PfGW456L13_1397	0.23	+2.2
1,545,318	-		PfGW456L13_1397	0.23	-2.6
1,545,318	-		PfGW456L13_1397	0.23	-0.1
1,545,359	+		PfGW456L13_1397	0.26	+1.2
1,545,383	+		PfGW456L13_1397	0.27	-1.3
1,545,384	-		PfGW456L13_1397	0.27	+2.2
1,545,427	+		PfGW456L13_1397	0.30	+1.2
1,545,427	+		PfGW456L13_1397	0.30	+1.4
1,545,428	-		PfGW456L13_1397	0.30	-0.4
1,545,428	-		PfGW456L13_1397	0.30	-0.3
1,545,720	-		PfGW456L13_1397	0.50	+0.8
1,545,720	-		PfGW456L13_1397	0.50	+0.8
1,545,731	+		PfGW456L13_1397	0.51	-0.3
1,545,732	-		PfGW456L13_1397	0.51	+0.4
1,545,732	-		PfGW456L13_1397	0.51	-0.0
1,545,847	+		PfGW456L13_1397	0.58	-1.5
1,546,248	-		PfGW456L13_1397	0.85	+0.9
1,546,423	+				-3.1
1,546,424	-				-2.4
1,546,427	+				+0.4
1,546,427	+				-1.1
1,546,427	+				-2.0
1,546,427	+				+0.3
1,546,427	+				+1.5
1,546,427	+				+0.7
1,546,428	-				+1.4
1,546,428	-				+0.6
1,546,428	-				+0.5
1,546,428	-				-0.6
1,546,428	-				+0.8
1,546,466	+				+1.9
1,546,515	-				+3.1
1,546,515	-				-1.5
1,546,640	+		PfGW456L13_1398	0.11	+1.7
1,546,640	+		PfGW456L13_1398	0.11	-1.3
1,546,739	+		PfGW456L13_1398	0.18	-0.5
1,546,739	+		PfGW456L13_1398	0.18	-0.2
1,546,739	+		PfGW456L13_1398	0.18	-2.2
1,546,739	+		PfGW456L13_1398	0.18	-0.7
1,546,739	+		PfGW456L13_1398	0.18	-0.7
1,546,739	+		PfGW456L13_1398	0.18	+1.0
1,546,739	+		PfGW456L13_1398	0.18	-0.6
1,546,739	+		PfGW456L13_1398	0.18	+2.0
1,546,739	+		PfGW456L13_1398	0.18	+0.8
1,546,739	+		PfGW456L13_1398	0.18	-1.9
1,546,740	-		PfGW456L13_1398	0.18	+1.1
1,546,740	-		PfGW456L13_1398	0.18	+2.9
1,546,740	-		PfGW456L13_1398	0.18	-2.7
1,546,740	-		PfGW456L13_1398	0.18	-0.2
1,546,740	-		PfGW456L13_1398	0.18	-1.4
1,546,817	+		PfGW456L13_1398	0.24	+0.6
1,546,817	+		PfGW456L13_1398	0.24	-2.1
1,546,818	-		PfGW456L13_1398	0.24	+1.8
1,546,818	-		PfGW456L13_1398	0.24	+1.2
1,546,818	-		PfGW456L13_1398	0.24	+0.9
1,546,818	-		PfGW456L13_1398	0.24	-0.8
1,546,832	+		PfGW456L13_1398	0.25	+2.0
1,546,832	+		PfGW456L13_1398	0.25	-1.7
1,546,832	+		PfGW456L13_1398	0.25	+3.6
1,547,030	-		PfGW456L13_1398	0.40	-3.0
1,547,042	+		PfGW456L13_1398	0.40	+2.2
1,547,042	+		PfGW456L13_1398	0.40	-1.1
1,547,042	+		PfGW456L13_1398	0.40	-1.2
1,547,042	+		PfGW456L13_1398	0.40	-1.4
1,547,043	-		PfGW456L13_1398	0.41	+0.9
1,547,204	+		PfGW456L13_1398	0.52	+1.3
1,547,205	-		PfGW456L13_1398	0.52	+0.4
1,547,205	-		PfGW456L13_1398	0.52	-2.1
1,547,237	+		PfGW456L13_1398	0.55	+0.5
1,547,237	+		PfGW456L13_1398	0.55	-1.2
1,547,237	+		PfGW456L13_1398	0.55	+0.7
1,547,237	+		PfGW456L13_1398	0.55	-0.8
1,547,237	+		PfGW456L13_1398	0.55	-1.3
1,547,238	-		PfGW456L13_1398	0.55	-1.1
1,547,238	-		PfGW456L13_1398	0.55	-1.3
1,547,238	-		PfGW456L13_1398	0.55	+1.2
1,547,238	-		PfGW456L13_1398	0.55	-2.6
1,547,238	-		PfGW456L13_1398	0.55	-1.5
1,547,238	-		PfGW456L13_1398	0.55	-0.8
1,547,238	-		PfGW456L13_1398	0.55	+0.4
1,547,238	-		PfGW456L13_1398	0.55	+0.4
1,547,309	+		PfGW456L13_1398	0.60	+0.6
1,547,309	+		PfGW456L13_1398	0.60	-1.9
1,547,310	-		PfGW456L13_1398	0.60	-1.2
1,547,310	-		PfGW456L13_1398	0.60	-1.7
1,547,363	+		PfGW456L13_1398	0.64	+3.0
1,547,363	+		PfGW456L13_1398	0.64	+2.3
1,547,363	+		PfGW456L13_1398	0.64	+0.4
1,547,363	+		PfGW456L13_1398	0.64	+0.2
1,547,364	-		PfGW456L13_1398	0.64	-1.9
1,547,364	-		PfGW456L13_1398	0.64	+0.7
1,547,451	-		PfGW456L13_1398	0.70	+0.3
1,547,451	-		PfGW456L13_1398	0.70	-1.3
1,547,451	-		PfGW456L13_1398	0.70	+0.3
1,547,451	-		PfGW456L13_1398	0.70	+1.7