Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1224

Experiment: octanoate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	octanoate (C)
1,365,688	+		PfGW456L13_1222	0.86	-2.7
1,365,689	-		PfGW456L13_1222	0.86	-1.2
1,365,689	-		PfGW456L13_1222	0.86	-0.5
1,365,689	-				+1.4
1,365,772	-				-0.7
1,365,794	+				-0.1
1,365,795	-				-2.3
1,365,795	-				-1.7
1,365,800	-				+2.0
1,365,800	-				+2.0
1,365,855	+				+0.1
1,365,855	+				+0.1
1,365,856	-				+2.9
1,365,856	-				-0.7
1,365,856	-				-1.3
1,365,906	+				+2.2
1,365,907	-				+0.9
1,365,907	-				+2.0
1,365,907	-				-0.9
1,365,907	-				+0.3
1,365,907	-				+0.8
1,365,907	-				-0.6
1,365,925	+				-2.5
1,365,925	+				-0.7
1,365,925	+				-1.6
1,365,925	+				+2.6
1,365,925	+				+2.5
1,365,925	+				+1.5
1,365,925	+				-2.2
1,365,925	+				-0.8
1,365,925	+				+0.3
1,365,925	+				-1.9
1,365,925	+				+0.4
1,365,926	-				-0.3
1,365,926	-				-1.9
1,365,926	-				+0.0
1,365,926	-				-0.4
1,365,926	-				+0.4
1,365,926	-				+0.2
1,365,926	-				-1.8
1,365,926	-				-0.1
1,365,939	+				-1.3
1,365,939	+				-0.4
1,365,939	+				-1.4
1,365,940	-				-0.7
1,365,940	-				+0.2
1,365,940	-				+1.1
1,365,940	-				-0.4
1,365,944	+				+0.3
1,365,944	+				+0.9
1,365,944	+				-0.3
1,365,945	-				+0.8
1,365,945	-				-1.5
1,365,945	-				+0.3
1,365,945	-				+1.0
1,365,956	+				-1.6
1,365,956	+				+0.6
1,365,956	+				+1.3
1,365,956	+				+2.2
1,365,956	+				+0.5
1,365,956	+				-0.5
1,365,957	-				-1.6
1,365,957	-				-1.9
1,365,957	-				+0.1
1,365,957	-				+0.5
1,366,313	+		PfGW456L13_1223	0.52	+2.2
1,366,313	+		PfGW456L13_1223	0.52	+0.4
1,366,313	+		PfGW456L13_1223	0.52	+0.2
1,366,313	+		PfGW456L13_1223	0.52	+0.9
1,366,313	+		PfGW456L13_1223	0.52	-0.9
1,366,313	+		PfGW456L13_1223	0.52	+0.0
1,366,314	-		PfGW456L13_1223	0.53	-0.8
1,366,314	-		PfGW456L13_1223	0.53	-2.0
1,366,658	+				+2.2
1,366,659	-				-2.0
1,366,871	-		PfGW456L13_1224	0.33	+0.1
1,366,871	-		PfGW456L13_1224	0.33	+1.8
1,366,905	+		PfGW456L13_1224	0.38	-0.5
1,366,905	+		PfGW456L13_1224	0.38	+0.4
1,366,906	-		PfGW456L13_1224	0.39	+1.3
1,366,946	+		PfGW456L13_1224	0.45	-1.8
1,366,946	+		PfGW456L13_1224	0.45	+0.8
1,366,946	+		PfGW456L13_1224	0.45	+2.1
1,366,946	+		PfGW456L13_1224	0.45	-3.0
1,366,947	-		PfGW456L13_1224	0.45	-0.8
1,366,947	-		PfGW456L13_1224	0.45	+1.4
1,366,947	-		PfGW456L13_1224	0.45	+1.1
1,366,947	-		PfGW456L13_1224	0.45	+0.6
1,366,991	+		PfGW456L13_1224	0.52	+0.8
1,367,108	+		PfGW456L13_1224	0.70	-0.1
1,367,292	+				-1.2
1,367,293	-				+0.9
1,367,293	-				+1.5
1,367,293	-				+0.5
1,367,293	-				-0.5
1,367,307	+				+1.6
1,367,344	+				-0.6
1,367,372	+				+0.4
1,367,372	+				+0.6
1,367,373	-				+0.4
1,367,373	-				+0.7
1,367,384	-				-0.7
1,367,384	-				+0.0
1,367,384	-				+1.4
1,367,384	-				-0.0
1,367,417	+				+1.4
1,367,436	+				+1.3
1,367,437	-				-0.0
1,367,448	+				-1.5
1,367,448	+				+1.9
1,367,448	+				+1.1
1,367,448	+				+1.9
1,367,448	+				+2.1
1,367,448	+				-1.5
1,367,448	+				+0.4
1,367,448	+				+1.4
1,367,449	-				+1.7
1,367,452	+				+0.7
1,367,452	+				+2.2
1,367,452	+				-0.0
1,367,452	+				+2.0
1,367,452	+				+0.2
1,367,453	-				-0.3
1,367,453	-				+0.6
1,367,453	-				-1.4
1,367,453	-				-0.5
1,367,467	+				-0.9
1,367,467	+				+0.5
1,367,467	+				-0.0
1,367,467	+				-1.2
1,367,467	+				+1.5
1,367,467	+				-1.2
1,367,467	+				+1.4
1,367,468	-				-0.7
1,367,474	+				-0.8
1,367,475	-				+2.3
1,367,510	+				+2.7
1,367,510	+				+0.3
1,367,511	-				+1.4
1,367,511	-				-0.6
1,367,511	-				+2.4
1,367,529	+				+1.9
1,367,530	-				-1.7
1,367,531	+				-0.5
1,367,531	+				+0.7
1,367,532	-				-0.2
1,367,532	-				-1.7
1,367,650	+		PfGW456L13_1225	0.24	-0.0
1,367,894	+		PfGW456L13_1225	0.82	-1.5
1,367,894	+		PfGW456L13_1225	0.82	-1.5
1,367,894	+		PfGW456L13_1225	0.82	-3.1
1,367,894	+		PfGW456L13_1225	0.82	+0.6
1,367,894	+		PfGW456L13_1225	0.82	-2.4
1,367,894	+		PfGW456L13_1225	0.82	-1.8
1,367,894	+		PfGW456L13_1225	0.82	+1.9
1,367,894	+		PfGW456L13_1225	0.82	+0.8
1,367,894	+		PfGW456L13_1225	0.82	+1.3
1,367,894	+		PfGW456L13_1225	0.82	+2.0
1,367,894	+		PfGW456L13_1225	0.82	-0.5
1,367,895	-		PfGW456L13_1225	0.82	-1.3
1,367,895	-		PfGW456L13_1225	0.82	-1.9
1,367,895	-		PfGW456L13_1225	0.82	-1.1
1,367,895	-		PfGW456L13_1225	0.82	-0.5
1,367,895	-		PfGW456L13_1225	0.82	+2.0
1,367,895	-		PfGW456L13_1225	0.82	-2.5
1,367,895	-		PfGW456L13_1225	0.82	+0.3
1,367,938	+				-0.7
1,367,939	-				-1.4
1,367,939	-				-1.9
1,367,949	-				-1.8
1,367,985	+				+1.2
1,367,986	-				-1.0
1,367,986	-				+1.7
1,367,990	+				-0.5
1,367,990	+				+1.3
1,367,990	+				+3.8
1,367,990	+				-0.6
1,367,990	+				+0.8
1,367,991	-				-0.3
1,367,991	-				+0.4
1,367,991	-				-0.8
1,367,991	-				+0.7
1,367,991	-				-1.3
1,367,991	-				+1.5
1,367,991	-				-0.5
1,368,033	+				+0.9
1,368,034	-				-2.5
1,368,055	+				+0.8
1,368,132	+				-0.5
1,368,195	+				+2.2
1,368,195	+				-2.0
1,368,195	+				+1.9
1,368,195	+				+1.7
1,368,195	+				-1.9
1,368,196	-				-1.8
1,368,196	-				-1.5
1,368,196	-				+2.0
1,368,196	-				-1.6
1,368,196	-				-1.8
1,368,274	+		PfGW456L13_1226	0.13	-1.2
1,368,274	+		PfGW456L13_1226	0.13	+0.2
1,368,274	+		PfGW456L13_1226	0.13	-2.1
1,368,274	+		PfGW456L13_1226	0.13	-0.5
1,368,274	+		PfGW456L13_1226	0.13	-1.3
1,368,274	+		PfGW456L13_1226	0.13	-0.5
1,368,274	+		PfGW456L13_1226	0.13	-1.4
1,368,274	+		PfGW456L13_1226	0.13	-2.4
1,368,274	+		PfGW456L13_1226	0.13	-1.6
1,368,274	+		PfGW456L13_1226	0.13	-0.8
1,368,274	+		PfGW456L13_1226	0.13	-1.0
1,368,274	+		PfGW456L13_1226	0.13	-1.2
1,368,274	+		PfGW456L13_1226	0.13	+1.6
1,368,274	+		PfGW456L13_1226	0.13	-1.4
1,368,274	+		PfGW456L13_1226	0.13	-2.0
1,368,274	+		PfGW456L13_1226	0.13	-0.8
1,368,274	+		PfGW456L13_1226	0.13	-1.5
1,368,275	-		PfGW456L13_1226	0.13	-1.3
1,368,275	-		PfGW456L13_1226	0.13	-1.0
1,368,275	-		PfGW456L13_1226	0.13	+0.7
1,368,275	-		PfGW456L13_1226	0.13	-1.2
1,368,275	-		PfGW456L13_1226	0.13	-1.4
1,368,275	-		PfGW456L13_1226	0.13	-1.9
1,368,275	-		PfGW456L13_1226	0.13	-1.9
1,368,275	-		PfGW456L13_1226	0.13	-2.4
1,368,275	-		PfGW456L13_1226	0.13	-3.1
1,368,275	-		PfGW456L13_1226	0.13	-1.8
1,368,287	-		PfGW456L13_1226	0.15	-1.8