Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4401

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
5,260,394	+		Echvi_4400	0.35	-2.0
5,260,406	-		Echvi_4400	0.36	-0.2
5,260,406	-		Echvi_4400	0.36	+0.8
5,260,424	+		Echvi_4400	0.37	+1.0
5,260,424	+		Echvi_4400	0.37	-0.4
5,260,425	-		Echvi_4400	0.37	+0.3
5,260,451	+		Echvi_4400	0.39	-0.3
5,260,472	+		Echvi_4400	0.41	+1.7
5,260,476	-		Echvi_4400	0.41	+0.4
5,260,508	+		Echvi_4400	0.43	+1.3
5,260,509	-		Echvi_4400	0.43	-1.2
5,260,509	-		Echvi_4400	0.43	-0.5
5,260,512	+		Echvi_4400	0.44	-0.7
5,260,578	+		Echvi_4400	0.49	-0.4
5,260,579	-		Echvi_4400	0.49	+0.3
5,260,586	+		Echvi_4400	0.49	-1.0
5,260,586	+		Echvi_4400	0.49	+0.2
5,260,587	-		Echvi_4400	0.49	+0.1
5,260,607	+		Echvi_4400	0.51	+0.1
5,260,607	+		Echvi_4400	0.51	-1.0
5,260,608	-		Echvi_4400	0.51	+0.3
5,260,608	-		Echvi_4400	0.51	+0.5
5,260,621	+		Echvi_4400	0.52	+1.0
5,260,621	+		Echvi_4400	0.52	-0.9
5,260,621	+		Echvi_4400	0.52	-1.7
5,260,622	-		Echvi_4400	0.52	-0.8
5,260,622	-		Echvi_4400	0.52	-0.3
5,260,622	-		Echvi_4400	0.52	+1.5
5,260,622	-		Echvi_4400	0.52	+0.2
5,260,625	+		Echvi_4400	0.52	+0.5
5,260,626	-		Echvi_4400	0.52	+1.3
5,260,648	+		Echvi_4400	0.54	+0.5
5,260,659	+		Echvi_4400	0.55	+0.3
5,260,659	+		Echvi_4400	0.55	-2.7
5,260,727	+		Echvi_4400	0.60	+0.3
5,260,728	-		Echvi_4400	0.60	-1.3
5,260,740	-		Echvi_4400	0.61	-0.6
5,260,765	+		Echvi_4400	0.63	-0.7
5,260,778	+		Echvi_4400	0.64	-1.6
5,260,807	-		Echvi_4400	0.66	-0.2
5,260,840	+		Echvi_4400	0.68	+0.7
5,260,847	+		Echvi_4400	0.69	+0.4
5,260,847	+		Echvi_4400	0.69	+0.4
5,260,847	+		Echvi_4400	0.69	+0.7
5,260,848	-		Echvi_4400	0.69	-0.7
5,260,848	-		Echvi_4400	0.69	-0.3
5,260,855	+		Echvi_4400	0.70	+1.7
5,260,878	+		Echvi_4400	0.71	+1.5
5,260,934	+		Echvi_4400	0.76	-0.4
5,260,934	+		Echvi_4400	0.76	-1.0
5,260,934	+		Echvi_4400	0.76	-0.6
5,260,934	+		Echvi_4400	0.76	+1.3
5,260,935	-		Echvi_4400	0.76	+0.4
5,260,935	-		Echvi_4400	0.76	-0.1
5,260,935	-		Echvi_4400	0.76	-1.1
5,260,962	+		Echvi_4400	0.78	+0.2
5,260,962	+		Echvi_4400	0.78	-0.2
5,260,968	-		Echvi_4400	0.78	-1.4
5,260,974	-		Echvi_4400	0.79	-0.8
5,261,138	+				-0.4
5,261,139	-				-2.0
5,261,139	-				+0.8
5,261,143	+				+0.0
5,261,153	+				+0.1
5,261,154	-				+1.4
5,261,154	-				-0.4
5,261,161	+				+1.5
5,261,161	+				-0.1
5,261,161	+				-0.3
5,261,161	+				-0.3
5,261,161	+				+0.8
5,261,161	+				+0.0
5,261,162	-				+1.8
5,261,162	-				+0.1
5,261,162	-				-1.2
5,261,162	-				-0.9
5,261,198	-				+3.7
5,261,198	-				-0.4
5,261,348	-				-0.2
5,261,398	+				+0.5
5,261,398	+				+0.2
5,261,398	+				+0.6
5,261,408	+				+0.3
5,261,409	-				+0.5
5,261,414	+				-0.9
5,261,417	+				+0.3
5,261,417	+				+0.4
5,261,417	+				+0.7
5,261,420	+				-2.3
5,261,435	+				+0.1
5,261,436	-				+0.3
5,261,463	-				-1.8
5,261,465	+				-0.9
5,261,465	+				+0.7
5,261,466	-				+0.0
5,261,466	-				-0.7
5,261,479	+		Echvi_4401	0.10	-1.9
5,261,507	-		Echvi_4401	0.13	-0.3
5,261,509	+		Echvi_4401	0.13	-2.2
5,261,510	-		Echvi_4401	0.13	-1.5
5,261,510	-		Echvi_4401	0.13	-0.9
5,261,536	+		Echvi_4401	0.15	-0.3
5,261,536	+		Echvi_4401	0.15	-1.1
5,261,536	+		Echvi_4401	0.15	+1.3
5,261,537	-		Echvi_4401	0.15	-1.7
5,261,557	+		Echvi_4401	0.17	-0.7
5,261,639	+		Echvi_4401	0.24	+0.5
5,261,672	-		Echvi_4401	0.27	-1.3
5,261,700	-		Echvi_4401	0.30	+1.7
5,261,743	+		Echvi_4401	0.34	-1.4
5,261,802	-		Echvi_4401	0.39	-1.0
5,261,881	+		Echvi_4401	0.46	-0.9
5,261,950	+		Echvi_4401	0.52	-1.1
5,261,968	+		Echvi_4401	0.54	-0.4
5,261,972	+		Echvi_4401	0.54	-2.4
5,261,973	-		Echvi_4401	0.54	+1.4
5,261,973	-		Echvi_4401	0.54	-4.0
5,262,012	-		Echvi_4401	0.58	-0.9
5,262,012	-		Echvi_4401	0.58	-1.6
5,262,039	+		Echvi_4401	0.60	-2.0
5,262,050	-		Echvi_4401	0.61	-1.8
5,262,076	-		Echvi_4401	0.64	-2.3
5,262,084	+		Echvi_4401	0.64	+1.1
5,262,084	+		Echvi_4401	0.64	-0.1
5,262,087	+		Echvi_4401	0.65	-1.4
5,262,088	-		Echvi_4401	0.65	-1.1
5,262,088	-		Echvi_4401	0.65	-3.3
5,262,088	-		Echvi_4401	0.65	-1.7
5,262,097	-		Echvi_4401	0.66	-1.8
5,262,140	+		Echvi_4401	0.69	+0.4
5,262,141	-		Echvi_4401	0.69	-2.1
5,262,163	+		Echvi_4401	0.71	+0.1
5,262,163	+		Echvi_4401	0.71	-2.6
5,262,163	+		Echvi_4401	0.71	-0.5
5,262,163	+		Echvi_4401	0.71	-1.1
5,262,185	+		Echvi_4401	0.73	-1.3
5,262,185	+		Echvi_4401	0.73	-0.3
5,262,185	+		Echvi_4401	0.73	-0.9
5,262,185	+		Echvi_4401	0.73	-0.8
5,262,186	-		Echvi_4401	0.73	-1.4
5,262,186	-		Echvi_4401	0.73	-1.2
5,262,186	-		Echvi_4401	0.73	-2.0
5,262,300	+		Echvi_4401	0.84	-0.2
5,262,300	+		Echvi_4401	0.84	+0.7
5,262,300	+		Echvi_4401	0.84	-2.7
5,262,301	-		Echvi_4401	0.84	-0.9
5,262,301	-		Echvi_4401	0.84	-1.5
5,262,335	+		Echvi_4401	0.87	-1.5
5,262,335	+		Echvi_4401	0.87	-0.9
5,262,348	-		Echvi_4401	0.88	-1.3
5,262,348	-		Echvi_4401	0.88	+0.0
5,262,383	+				-1.8
5,262,387	-				-3.1
5,262,431	+				+0.7
5,262,432	-				-0.6
5,262,459	+				-1.5
5,262,460	-				-0.6
5,262,460	-				+0.1
5,262,460	-				-0.7
5,262,520	+				-0.4
5,262,520	+				-0.8
5,262,520	+				-0.3
5,262,525	+				+0.7
5,262,529	+				-1.5
5,262,549	+				-2.1
5,262,549	+				-0.1
5,262,549	+				+0.7
5,262,696	+				+0.5
5,262,699	+				-1.6
5,262,723	+				+0.1
5,262,816	+				-1.6
5,262,837	+				-1.4
5,262,837	+				-0.3
5,262,837	+				-0.8
5,262,837	+				-0.1
5,262,837	+				-1.1
5,262,837	+				+0.5
5,262,838	-				-1.7
5,262,838	-				-0.5
5,262,838	-				+0.3
5,262,839	+				+0.3
5,262,889	+		Echvi_4402	0.11	-0.7
5,262,930	+		Echvi_4402	0.13	-0.8
5,262,939	+		Echvi_4402	0.13	-1.8
5,262,940	-		Echvi_4402	0.13	-0.7
5,262,956	-		Echvi_4402	0.14	-0.9
5,263,026	+		Echvi_4402	0.17	-0.8
5,263,125	+		Echvi_4402	0.21	-0.4
5,263,125	+		Echvi_4402	0.21	-0.5
5,263,126	-		Echvi_4402	0.21	+0.2
5,263,126	-		Echvi_4402	0.21	-1.3
5,263,170	+		Echvi_4402	0.22	-1.5
5,263,175	-		Echvi_4402	0.23	-0.8
5,263,275	-		Echvi_4402	0.26	-0.0
5,263,356	+		Echvi_4402	0.30	+0.4
5,263,382	+		Echvi_4402	0.31	+2.9
5,263,382	+		Echvi_4402	0.31	-1.2
5,263,411	+		Echvi_4402	0.32	-0.3
5,263,411	+		Echvi_4402	0.32	-0.6
5,263,411	+		Echvi_4402	0.32	-0.1
5,263,461	+		Echvi_4402	0.34	+0.5