Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3832

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
4,577,634	+		Echvi_3830	0.79	-0.1
4,577,634	+		Echvi_3830	0.79	-0.5
4,577,635	-		Echvi_3830	0.79	+1.3
4,577,695	-		Echvi_3830	0.83	+2.9
4,577,695	-		Echvi_3830	0.83	+0.6
4,577,789	+				-2.8
4,577,816	+				-0.5
4,577,817	-				+0.5
4,577,829	+				+0.3
4,577,837	-				-0.0
4,577,871	+				+0.3
4,577,957	+				+0.5
4,577,957	+				-0.3
4,577,957	+				-0.9
4,577,958	-				-0.9
4,577,965	+				-1.3
4,577,965	+				-0.2
4,577,965	+				-0.3
4,577,966	-				-0.1
4,577,966	-				-0.8
4,577,967	+				-0.1
4,577,967	+				+0.8
4,577,968	-				-2.0
4,577,968	-				+0.2
4,577,976	-				+0.0
4,577,976	-				-1.3
4,577,995	+		Echvi_3831	0.13	-0.1
4,578,029	+		Echvi_3831	0.21	-0.1
4,578,030	-		Echvi_3831	0.22	-0.3
4,578,030	-		Echvi_3831	0.22	+0.1
4,578,035	+		Echvi_3831	0.23	+0.0
4,578,035	+		Echvi_3831	0.23	-0.2
4,578,036	-		Echvi_3831	0.23	-0.4
4,578,100	-		Echvi_3831	0.39	+0.1
4,578,106	+		Echvi_3831	0.41	+0.5
4,578,107	-		Echvi_3831	0.41	+0.9
4,578,110	+		Echvi_3831	0.42	-0.7
4,578,110	+		Echvi_3831	0.42	-2.4
4,578,111	-		Echvi_3831	0.42	+1.7
4,578,111	-		Echvi_3831	0.42	+0.1
4,578,111	-		Echvi_3831	0.42	+0.8
4,578,111	-		Echvi_3831	0.42	-0.6
4,578,141	-		Echvi_3831	0.49	-0.8
4,578,141	-		Echvi_3831	0.49	-0.5
4,578,141	-		Echvi_3831	0.49	-0.6
4,578,152	+		Echvi_3831	0.52	-0.5
4,578,153	-		Echvi_3831	0.52	-0.4
4,578,155	+		Echvi_3831	0.53	+0.2
4,578,219	+		Echvi_3831	0.69	-0.9
4,578,219	+		Echvi_3831	0.69	-0.7
4,578,231	+		Echvi_3831	0.72	+0.5
4,578,231	+		Echvi_3831	0.72	-0.2
4,578,295	-		Echvi_3831	0.88	+1.0
4,578,300	+		Echvi_3831	0.89	+0.6
4,578,310	-				+0.5
4,578,321	+				-0.9
4,578,323	+				+0.8
4,578,323	+				+0.7
4,578,339	+				-0.3
4,578,339	+				-0.2
4,578,339	+				+0.1
4,578,339	+				-0.1
4,578,344	+				-0.2
4,578,344	+				-0.9
4,578,344	+				-2.9
4,578,344	+				+0.5
4,578,374	+				+1.0
4,578,374	+				-0.3
4,578,374	+				-2.6
4,578,374	+				-1.0
4,578,443	+				-2.1
4,578,444	+				-0.8
4,578,444	+				+1.5
4,578,445	-				-0.0
4,578,445	-				+0.8
4,578,445	-				+0.3
4,578,445	-				+0.1
4,578,445	-				-0.1
4,578,445	-				+0.2
4,578,445	-				-0.2
4,578,445	-				-0.5
4,578,446	+				+0.5
4,578,495	+				+0.9
4,578,505	+				+0.2
4,578,519	+				+0.5
4,578,519	+				-0.3
4,578,520	-				+1.1
4,578,523	-				+0.6
4,578,523	-				-1.3
4,578,570	+				-0.1
4,578,576	+				-0.1
4,578,576	+				+0.9
4,578,577	-				-0.5
4,578,580	-				-1.2
4,578,591	+				+0.4
4,578,592	-				+1.5
4,578,609	+				-1.8
4,578,698	-				-1.9
4,578,738	+				-2.1
4,578,738	+				-3.5
4,578,782	-		Echvi_3832	0.12	-2.5
4,578,831	+		Echvi_3832	0.15	-3.1
4,578,917	-		Echvi_3832	0.21	-4.3
4,579,018	-		Echvi_3832	0.27	-2.6
4,579,040	-		Echvi_3832	0.28	-2.4
4,579,040	-		Echvi_3832	0.28	-3.2
4,579,055	+		Echvi_3832	0.29	-3.8
4,579,056	-		Echvi_3832	0.29	-0.9
4,579,056	-		Echvi_3832	0.29	-1.5
4,579,128	+		Echvi_3832	0.34	-3.8
4,579,151	+		Echvi_3832	0.36	-1.9
4,579,172	-		Echvi_3832	0.37	-4.0
4,579,192	+		Echvi_3832	0.38	-3.1
4,579,223	+		Echvi_3832	0.40	-1.2
4,579,283	+		Echvi_3832	0.44	-3.9
4,579,284	-		Echvi_3832	0.44	-2.8
4,579,294	+		Echvi_3832	0.45	-4.1
4,579,294	+		Echvi_3832	0.45	-3.8
4,579,295	-		Echvi_3832	0.45	-1.6
4,579,295	-		Echvi_3832	0.45	-2.2
4,579,295	-		Echvi_3832	0.45	-1.9
4,579,306	+		Echvi_3832	0.46	-3.1
4,579,306	+		Echvi_3832	0.46	-2.1
4,579,306	+		Echvi_3832	0.46	-2.8
4,579,306	+		Echvi_3832	0.46	-2.6
4,579,306	+		Echvi_3832	0.46	-3.5
4,579,316	+		Echvi_3832	0.46	-2.6
4,579,316	+		Echvi_3832	0.46	-3.0
4,579,327	+		Echvi_3832	0.47	-2.8
4,579,327	+		Echvi_3832	0.47	-1.9
4,579,327	+		Echvi_3832	0.47	-3.4
4,579,328	-		Echvi_3832	0.47	-0.8
4,579,334	-		Echvi_3832	0.47	-2.3
4,579,346	-		Echvi_3832	0.48	-1.8
4,579,349	+		Echvi_3832	0.48	-1.7
4,579,349	+		Echvi_3832	0.48	-5.0
4,579,349	+		Echvi_3832	0.48	-2.2
4,579,350	-		Echvi_3832	0.48	-2.1
4,579,447	+		Echvi_3832	0.55	-2.2
4,579,448	-		Echvi_3832	0.55	-4.4
4,579,448	-		Echvi_3832	0.55	-2.8
4,579,532	-		Echvi_3832	0.60	-3.3
4,579,534	+		Echvi_3832	0.60	-2.3
4,579,534	+		Echvi_3832	0.60	-0.8
4,579,534	+		Echvi_3832	0.60	-1.0
4,579,535	-		Echvi_3832	0.60	-2.1
4,579,535	-		Echvi_3832	0.60	-2.4
4,579,543	-		Echvi_3832	0.61	-4.0
4,579,674	+		Echvi_3832	0.69	-1.4
4,579,706	+		Echvi_3832	0.71	-0.6
4,579,706	+		Echvi_3832	0.71	-0.3
4,579,707	-		Echvi_3832	0.71	-2.6
4,579,707	-		Echvi_3832	0.71	-2.6
4,579,817	+		Echvi_3832	0.78	-0.4
4,579,819	+		Echvi_3832	0.78	+1.5
4,579,819	+		Echvi_3832	0.78	-0.3
4,579,819	+		Echvi_3832	0.78	-1.0
4,579,820	-		Echvi_3832	0.79	-0.8
4,579,820	-		Echvi_3832	0.79	-4.3
4,579,832	+		Echvi_3832	0.79	-0.6
4,579,833	-		Echvi_3832	0.79	-3.5
4,579,833	-		Echvi_3832	0.79	-2.5
4,579,833	-		Echvi_3832	0.79	-3.6
4,579,834	+		Echvi_3832	0.79	-0.2
4,579,834	+		Echvi_3832	0.79	-0.4
4,579,835	-		Echvi_3832	0.80	-2.2
4,579,835	-		Echvi_3832	0.80	-1.6
4,579,836	+		Echvi_3832	0.80	+2.1
4,579,836	+		Echvi_3832	0.80	+1.7
4,579,836	+		Echvi_3832	0.80	-0.8
4,579,837	-		Echvi_3832	0.80	-2.9
4,579,837	-		Echvi_3832	0.80	-3.1
4,579,837	-		Echvi_3832	0.80	-3.2
4,579,837	-		Echvi_3832	0.80	+1.5
4,579,841	+		Echvi_3832	0.80	-1.1
4,579,842	-		Echvi_3832	0.80	-1.3
4,579,866	+		Echvi_3832	0.82	-0.6
4,579,883	+		Echvi_3832	0.83	-0.3
4,579,883	+		Echvi_3832	0.83	-0.2
4,579,927	+		Echvi_3832	0.85	+0.4
4,579,927	+		Echvi_3832	0.85	+0.9
4,579,927	+		Echvi_3832	0.85	-0.1
4,580,000	-				-5.5
4,580,082	-				-3.0
4,580,128	-				-3.6
4,580,297	-				-3.3
4,580,314	-				-1.9
4,580,363	-				-3.8
4,580,464	+		Echvi_3833	0.14	-4.2
4,580,542	-		Echvi_3833	0.21	-2.4
4,580,543	+		Echvi_3833	0.21	-0.8
4,580,568	-		Echvi_3833	0.23	-3.2
4,580,638	+		Echvi_3833	0.29	-2.9
4,580,676	+		Echvi_3833	0.32	-3.6
4,580,676	+		Echvi_3833	0.32	-3.7
4,580,715	-		Echvi_3833	0.36	-3.1
4,580,747	+		Echvi_3833	0.38	-2.8
4,580,747	+		Echvi_3833	0.38	-2.4
4,580,748	-		Echvi_3833	0.38	-3.7
4,580,850	+		Echvi_3833	0.47	-2.9
4,580,851	-		Echvi_3833	0.47	-2.1
4,580,851	-		Echvi_3833	0.47	-2.2
4,580,851	-		Echvi_3833	0.47	-3.1
4,580,851	-		Echvi_3833	0.47	-2.2
4,580,851	-		Echvi_3833	0.47	-3.5
4,580,856	-		Echvi_3833	0.48	-4.3
4,580,871	+		Echvi_3833	0.49	+1.5
4,580,871	+		Echvi_3833	0.49	-2.2
4,580,871	+		Echvi_3833	0.49	-1.0
4,580,871	+		Echvi_3833	0.49	-3.4
4,580,872	-		Echvi_3833	0.49	-2.5
4,580,872	-		Echvi_3833	0.49	-2.9
4,580,881	-		Echvi_3833	0.50	-1.5
4,580,881	-		Echvi_3833	0.50	-2.3
4,580,912	-		Echvi_3833	0.52	-3.3
4,580,912	-		Echvi_3833	0.52	-2.6
4,580,943	+		Echvi_3833	0.55	-1.5
4,580,981	-		Echvi_3833	0.58	-1.8
4,581,056	-		Echvi_3833	0.65	-2.4
4,581,068	+		Echvi_3833	0.66	-1.8
4,581,094	-		Echvi_3833	0.68	-2.0
4,581,124	+		Echvi_3833	0.71	-3.7
4,581,125	-		Echvi_3833	0.71	-4.0
4,581,125	-		Echvi_3833	0.71	-1.9
4,581,148	+		Echvi_3833	0.73	-1.6