Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3817

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
4,558,997	-		Echvi_3816	0.57	-0.9
4,559,038	+		Echvi_3816	0.59	+1.3
4,559,089	+		Echvi_3816	0.63	-0.3
4,559,134	-		Echvi_3816	0.66	+1.1
4,559,134	-		Echvi_3816	0.66	+0.9
4,559,134	-		Echvi_3816	0.66	-1.7
4,559,170	+		Echvi_3816	0.68	-0.4
4,559,170	+		Echvi_3816	0.68	+0.4
4,559,171	-		Echvi_3816	0.68	+1.5
4,559,189	+		Echvi_3816	0.69	+0.1
4,559,190	-		Echvi_3816	0.69	-0.2
4,559,190	-		Echvi_3816	0.69	+0.6
4,559,229	-		Echvi_3816	0.72	-2.5
4,559,276	-		Echvi_3816	0.75	+0.3
4,559,277	+		Echvi_3816	0.75	-0.3
4,559,277	+		Echvi_3816	0.75	-0.5
4,559,277	+		Echvi_3816	0.75	-0.8
4,559,278	-		Echvi_3816	0.75	+1.1
4,559,278	-		Echvi_3816	0.75	-0.1
4,559,280	+		Echvi_3816	0.75	+0.9
4,559,280	+		Echvi_3816	0.75	-0.2
4,559,280	+		Echvi_3816	0.75	+1.2
4,559,280	+		Echvi_3816	0.75	+0.0
4,559,281	-		Echvi_3816	0.75	-0.4
4,559,281	-		Echvi_3816	0.75	-0.6
4,559,416	+		Echvi_3816	0.84	-0.1
4,559,417	-		Echvi_3816	0.84	-1.0
4,559,436	+		Echvi_3816	0.85	+1.4
4,559,488	+		Echvi_3816	0.88	+0.5
4,559,491	+		Echvi_3816	0.89	-1.1
4,559,491	+		Echvi_3816	0.89	+0.5
4,559,544	+				-1.5
4,559,545	-				-0.6
4,559,545	-				-0.1
4,559,558	-				-0.1
4,559,611	+				-0.4
4,559,612	-				-1.5
4,559,660	-				+0.2
4,559,680	+				+0.9
4,559,681	-				-0.4
4,559,696	+				-0.6
4,559,697	-				+0.3
4,559,735	+				-0.5
4,559,876	-				-0.3
4,559,878	-				-0.2
4,559,881	-				+1.2
4,559,988	+				+1.0
4,559,999	+				-1.6
4,559,999	+				-0.1
4,560,000	-				-0.5
4,560,001	+				+0.1
4,560,001	+				+0.9
4,560,017	-				-0.5
4,560,131	-				+1.1
4,560,171	-		Echvi_3817	0.14	+0.1
4,560,177	-		Echvi_3817	0.15	+0.7
4,560,177	-		Echvi_3817	0.15	-0.2
4,560,177	-		Echvi_3817	0.15	+1.2
4,560,207	+		Echvi_3817	0.17	+0.5
4,560,207	+		Echvi_3817	0.17	+1.1
4,560,207	+		Echvi_3817	0.17	-0.5
4,560,208	-		Echvi_3817	0.17	-0.5
4,560,208	-		Echvi_3817	0.17	+0.5
4,560,208	-		Echvi_3817	0.17	+1.0
4,560,214	+		Echvi_3817	0.17	+2.3
4,560,214	+		Echvi_3817	0.17	-2.4
4,560,219	+		Echvi_3817	0.18	-0.7
4,560,219	+		Echvi_3817	0.18	-1.3
4,560,219	+		Echvi_3817	0.18	+0.3
4,560,219	+		Echvi_3817	0.18	+0.0
4,560,219	+		Echvi_3817	0.18	-0.2
4,560,219	+		Echvi_3817	0.18	+0.1
4,560,220	-				+0.5
4,560,221	+		Echvi_3817	0.18	+0.5
4,560,222	-		Echvi_3817	0.18	+0.2
4,560,222	-		Echvi_3817	0.18	-1.1
4,560,269	+		Echvi_3817	0.21	+1.3
4,560,269	+		Echvi_3817	0.21	-1.9
4,560,269	+		Echvi_3817	0.21	+0.5
4,560,269	+		Echvi_3817	0.21	+0.6
4,560,270	-		Echvi_3817	0.21	+0.7
4,560,270	-		Echvi_3817	0.21	-0.2
4,560,270	-		Echvi_3817	0.21	+0.9
4,560,270	-		Echvi_3817	0.21	-0.5
4,560,270	-		Echvi_3817	0.21	+0.8
4,560,270	-		Echvi_3817	0.21	+0.4
4,560,273	+		Echvi_3817	0.21	+1.1
4,560,274	-		Echvi_3817	0.21	-1.3
4,560,274	-		Echvi_3817	0.21	+0.6
4,560,274	-		Echvi_3817	0.21	+0.7
4,560,350	-		Echvi_3817	0.27	+0.2
4,560,363	-		Echvi_3817	0.28	+0.3
4,560,484	-		Echvi_3817	0.36	+0.4
4,560,489	+		Echvi_3817	0.37	+0.5
4,560,490	-		Echvi_3817	0.37	-1.9
4,560,490	-		Echvi_3817	0.37	-0.1
4,560,518	+		Echvi_3817	0.39	-0.1
4,560,519	-		Echvi_3817	0.39	-0.6
4,560,577	-				+4.3
4,560,626	+		Echvi_3817	0.47	-0.5
4,560,672	+		Echvi_3817	0.50	-0.3
4,560,673	-		Echvi_3817	0.50	+0.4
4,560,726	+		Echvi_3817	0.54	-0.5
4,560,754	-		Echvi_3817	0.56	+0.2
4,560,822	-		Echvi_3817	0.60	+0.8
4,560,822	-		Echvi_3817	0.60	+0.2
4,560,825	+		Echvi_3817	0.61	+0.2
4,560,826	-		Echvi_3817	0.61	-1.1
4,560,826	-		Echvi_3817	0.61	+0.5
4,560,826	-		Echvi_3817	0.61	+3.1
4,560,837	+		Echvi_3817	0.62	+1.2
4,560,837	+		Echvi_3817	0.62	+0.8
4,560,842	+		Echvi_3817	0.62	+0.6
4,560,866	-		Echvi_3817	0.64	-0.6
4,560,866	-		Echvi_3817	0.64	-0.8
4,560,879	+		Echvi_3817	0.65	-1.5
4,560,906	+		Echvi_3817	0.66	+0.6
4,560,906	+		Echvi_3817	0.66	+0.5
4,560,906	+		Echvi_3817	0.66	-1.3
4,560,907	-		Echvi_3817	0.67	+0.3
4,560,938	+		Echvi_3817	0.69	+0.5
4,560,959	+		Echvi_3817	0.70	+0.3
4,560,959	+		Echvi_3817	0.70	-0.2
4,560,959	+		Echvi_3817	0.70	+0.2
4,560,959	+		Echvi_3817	0.70	-0.4
4,560,959	+		Echvi_3817	0.70	+0.3
4,560,960	-		Echvi_3817	0.70	-0.1
4,560,960	-		Echvi_3817	0.70	-1.5
4,560,960	-		Echvi_3817	0.70	-0.9
4,560,960	-		Echvi_3817	0.70	+0.9
4,560,960	-		Echvi_3817	0.70	-1.6
4,560,960	-		Echvi_3817	0.70	-0.3
4,560,961	+		Echvi_3817	0.70	+0.7
4,560,962	-		Echvi_3817	0.70	+1.7
4,560,962	-		Echvi_3817	0.70	-0.2
4,560,997	-		Echvi_3817	0.73	-0.1
4,561,000	+		Echvi_3817	0.73	-0.8
4,561,021	+		Echvi_3817	0.75	+1.3
4,561,022	-		Echvi_3817	0.75	+1.0
4,561,026	-		Echvi_3817	0.75	-0.2
4,561,039	-		Echvi_3817	0.76	+0.2
4,561,039	-		Echvi_3817	0.76	-1.5
4,561,039	-		Echvi_3817	0.76	-0.6
4,561,165	-		Echvi_3817	0.85	+0.4
4,561,171	-		Echvi_3817	0.85	-0.1
4,561,171	-		Echvi_3817	0.85	-0.5
4,561,173	+		Echvi_3817	0.85	-0.2
4,561,173	+		Echvi_3817	0.85	-0.1
4,561,181	+		Echvi_3817	0.86	+0.4
4,561,239	+				-0.9
4,561,351	-				-1.1
4,561,351	-				+1.9
4,561,352	+				+1.2
4,561,353	-				+0.5
4,561,399	+				-0.6
4,561,400	-				+0.3
4,561,400	-				-0.8
4,561,400	-				-0.8
4,561,406	+				+0.6
4,561,407	-				+0.5
4,561,407	-				-2.4
4,561,453	+				+0.7
4,561,481	+				+0.3
4,561,482	-				+0.8
4,561,482	-				+0.8
4,561,482	-				+1.7
4,561,482	-				-0.5
4,561,541	+				+0.4
4,561,542	-				+0.4
4,561,617	-				+0.1
4,561,658	+				+0.0
4,561,661	+				+0.8
4,561,664	-				+1.5
4,561,666	+				-0.2
4,561,666	+				-1.5
4,561,687	-				+0.3
4,561,687	-				-0.4
4,561,694	-				+0.0
4,561,706	+				-1.5
4,561,707	-				-1.5
4,561,766	+				-0.2
4,561,767	-				+0.7
4,561,767	-				-3.7
4,561,832	+				+0.5
4,561,833	-				-0.9
4,561,871	+		Echvi_3818	0.12	-1.5
4,562,070	-		Echvi_3818	0.37	-2.4
4,562,070	-				-0.1
4,562,070	-		Echvi_3818	0.37	-2.2
4,562,070	-		Echvi_3818	0.37	-1.3
4,562,070	-		Echvi_3818	0.37	-1.5
4,562,255	-		Echvi_3818	0.60	-1.1