Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3151

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,759,077	+				+0.7
3,759,130	+				+0.1
3,759,366	-		Echvi_3149	0.30	+0.2
3,759,366	-		Echvi_3149	0.30	-0.4
3,759,366	-		Echvi_3149	0.30	+0.3
3,759,367	+				-0.5
3,759,367	+		Echvi_3149	0.30	-0.7
3,759,367	+		Echvi_3149	0.30	-0.5
3,759,368	-		Echvi_3149	0.30	+0.3
3,759,368	-		Echvi_3149	0.30	+0.7
3,759,368	-		Echvi_3149	0.30	-0.2
3,759,388	+		Echvi_3149	0.34	+0.1
3,759,389	-		Echvi_3149	0.34	+0.4
3,759,389	-		Echvi_3149	0.34	+0.4
3,759,389	-		Echvi_3149	0.34	-1.6
3,759,490	+		Echvi_3149	0.55	-1.4
3,759,547	+		Echvi_3149	0.67	-0.5
3,759,547	+		Echvi_3149	0.67	+2.0
3,759,547	+		Echvi_3149	0.67	-0.6
3,759,548	-		Echvi_3149	0.68	+1.5
3,759,592	+		Echvi_3149	0.77	+3.5
3,759,635	-		Echvi_3149	0.86	+0.1
3,759,702	-				-0.6
3,759,719	+				+1.3
3,759,778	-		Echvi_3150	0.19	-0.1
3,759,804	+		Echvi_3150	0.28	-0.2
3,759,804	+		Echvi_3150	0.28	-0.8
3,759,804	+		Echvi_3150	0.28	-1.3
3,759,805	-		Echvi_3150	0.29	+0.0
3,759,805	-		Echvi_3150	0.29	+0.1
3,759,805	-		Echvi_3150	0.29	-0.0
3,759,809	-		Echvi_3150	0.30	-1.0
3,759,810	+				+0.5
3,759,828	+		Echvi_3150	0.37	-0.2
3,759,864	+		Echvi_3150	0.50	+0.4
3,759,865	-		Echvi_3150	0.51	+1.4
3,759,865	-		Echvi_3150	0.51	-1.5
3,759,865	-		Echvi_3150	0.51	-0.6
3,759,995	+				+0.9
3,759,996	-				+1.1
3,759,996	-				+0.2
3,759,999	+				-0.5
3,760,000	-				-1.2
3,760,003	-				+0.1
3,760,003	-				+0.3
3,760,054	+		Echvi_3151	0.22	+0.4
3,760,054	+		Echvi_3151	0.22	-2.1
3,760,075	+		Echvi_3151	0.32	-0.1
3,760,202	+				+0.0
3,760,203	-				-0.1
3,760,208	+				-0.8
3,760,222	-				-0.7
3,760,232	+				-0.3
3,760,232	+				-1.6
3,760,233	-				+1.0
3,760,275	+		Echvi_3152	0.13	-1.5
3,760,275	+				-1.0
3,760,276	-		Echvi_3152	0.14	-0.4
3,760,276	-		Echvi_3152	0.14	+0.2
3,760,276	-		Echvi_3152	0.14	-0.7
3,760,283	+		Echvi_3152	0.17	-2.2
3,760,284	-		Echvi_3152	0.17	-0.5
3,760,284	-		Echvi_3152	0.17	-0.2
3,760,284	-		Echvi_3152	0.17	-0.1
3,760,284	-		Echvi_3152	0.17	-2.0
3,760,287	-		Echvi_3152	0.19	-1.3
3,760,287	-		Echvi_3152	0.19	+0.6
3,760,287	-		Echvi_3152	0.19	-0.1
3,760,297	-		Echvi_3152	0.23	-1.0
3,760,298	+		Echvi_3152	0.24	-0.1
3,760,299	-		Echvi_3152	0.24	-0.5
3,760,311	-		Echvi_3152	0.30	+1.3
3,760,380	+		Echvi_3152	0.61	-1.0
3,760,463	-				+1.0
3,760,481	+				+1.5
3,760,482	-				-0.3
3,760,553	+		Echvi_3153	0.25	+0.1
3,760,553	+		Echvi_3153	0.25	+0.2
3,760,554	-		Echvi_3153	0.26	-0.2
3,760,554	-		Echvi_3153	0.26	-0.1
3,760,559	-		Echvi_3153	0.28	+0.6
3,760,559	-		Echvi_3153	0.28	+0.6
3,760,559	-		Echvi_3153	0.28	-0.5
3,760,559	-		Echvi_3153	0.28	+0.0
3,760,562	+		Echvi_3153	0.29	-0.0
3,760,562	+		Echvi_3153	0.29	+0.1
3,760,563	-		Echvi_3153	0.29	-0.1
3,760,563	-		Echvi_3153	0.29	-0.4
3,760,609	+		Echvi_3153	0.46	+0.1
3,760,609	+				+3.5
3,760,610	-		Echvi_3153	0.46	+0.5
3,760,621	+		Echvi_3153	0.50	-1.5
3,760,625	+		Echvi_3153	0.51	-0.9
3,760,638	-		Echvi_3153	0.56	+0.6
3,760,679	-		Echvi_3153	0.71	-0.8
3,760,681	+		Echvi_3153	0.71	-0.9
3,760,682	-		Echvi_3153	0.72	+0.1
3,760,682	-		Echvi_3153	0.72	+0.0
3,760,688	-		Echvi_3153	0.74	-0.2
3,760,688	-		Echvi_3153	0.74	+0.1
3,760,688	-		Echvi_3153	0.74	+0.6
3,760,696	+		Echvi_3153	0.77	-0.8
3,760,709	-		Echvi_3153	0.81	-1.9
3,760,709	-		Echvi_3153	0.81	+0.1
3,760,785	+				+0.6
3,760,798	+				+2.1
3,760,809	-				-0.2
3,760,836	+				-0.0
3,760,837	-				-0.3
3,760,856	+		Echvi_3154	0.11	-0.8
3,760,883	+		Echvi_3154	0.15	+0.5
3,760,883	+		Echvi_3154	0.15	+0.4
3,760,883	+		Echvi_3154	0.15	-0.6
3,760,884	-		Echvi_3154	0.15	-0.0
3,760,887	-		Echvi_3154	0.15	+0.3
3,760,887	-		Echvi_3154	0.15	-0.5
3,760,887	-		Echvi_3154	0.15	-0.7
3,760,887	-		Echvi_3154	0.15	-2.0
3,760,887	-		Echvi_3154	0.15	+0.1
3,760,889	+		Echvi_3154	0.15	-1.0
3,760,890	-		Echvi_3154	0.16	-0.0
3,760,921	+		Echvi_3154	0.20	+0.2
3,760,958	-		Echvi_3154	0.25	+0.9
3,760,993	+		Echvi_3154	0.30	+1.5
3,760,994	-		Echvi_3154	0.30	+1.2
3,760,994	-		Echvi_3154	0.30	+0.0
3,761,031	+		Echvi_3154	0.35	-1.0
3,761,031	+		Echvi_3154	0.35	-2.4
3,761,032	-		Echvi_3154	0.36	+1.0
3,761,038	+		Echvi_3154	0.36	-0.7
3,761,058	-		Echvi_3154	0.39	+0.2
3,761,058	-		Echvi_3154	0.39	+0.2
3,761,059	+		Echvi_3154	0.39	+0.4
3,761,059	+		Echvi_3154	0.39	-1.8
3,761,059	+		Echvi_3154	0.39	-1.0
3,761,060	-		Echvi_3154	0.40	-0.4
3,761,060	-		Echvi_3154	0.40	-0.5
3,761,060	-		Echvi_3154	0.40	+1.9
3,761,060	-		Echvi_3154	0.40	+1.2
3,761,060	-		Echvi_3154	0.40	+1.1
3,761,060	-		Echvi_3154	0.40	+0.2
3,761,060	-				-0.0
3,761,063	+		Echvi_3154	0.40	+0.5
3,761,064	-		Echvi_3154	0.40	-0.6
3,761,096	+		Echvi_3154	0.45	+1.4
3,761,105	+		Echvi_3154	0.46	-0.7
3,761,106	-		Echvi_3154	0.46	-0.9
3,761,109	+		Echvi_3154	0.46	+0.5
3,761,109	+		Echvi_3154	0.46	+1.7
3,761,113	+		Echvi_3154	0.47	-1.6
3,761,134	+		Echvi_3154	0.50	-1.3
3,761,148	-		Echvi_3154	0.52	+1.1
3,761,175	+		Echvi_3154	0.56	-2.2
3,761,175	+		Echvi_3154	0.56	-0.1
3,761,176	-		Echvi_3154	0.56	-0.6
3,761,176	-		Echvi_3154	0.56	+1.2
3,761,176	-		Echvi_3154	0.56	-0.9
3,761,176	-		Echvi_3154	0.56	+0.6
3,761,221	-		Echvi_3154	0.62	+0.7