Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2846

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
3,408,168	+		Echvi_2845	0.41	-3.5
3,408,168	+		Echvi_2845	0.41	-3.1
3,408,168	+		Echvi_2845	0.41	-1.5
3,408,169	-		Echvi_2845	0.41	-2.8
3,408,169	-		Echvi_2845	0.41	-1.3
3,408,171	-		Echvi_2845	0.41	-3.5
3,408,171	-		Echvi_2845	0.41	-2.5
3,408,238	+		Echvi_2845	0.47	-3.8
3,408,238	+		Echvi_2845	0.47	-2.4
3,408,272	-		Echvi_2845	0.51	-3.1
3,408,355	+		Echvi_2845	0.59	-2.6
3,408,356	-		Echvi_2845	0.59	-4.0
3,408,500	+		Echvi_2845	0.73	-4.2
3,408,501	-		Echvi_2845	0.73	-1.9
3,408,501	-		Echvi_2845	0.73	-3.0
3,408,615	+		Echvi_2845	0.84	-4.0
3,408,615	+		Echvi_2845	0.84	-4.2
3,408,775	-				-4.6
3,408,814	+				-3.5
3,408,817	+				-2.5
3,408,975	-				-1.3
3,408,995	+				-0.6
3,408,996	-				-1.5
3,408,996	-				-3.5
3,408,996	-				-2.2
3,409,005	+				-1.3
3,409,005	+				-0.3
3,409,005	+				-0.8
3,409,148	+				-0.9
3,409,163	+				-1.5
3,409,183	+				-2.3
3,409,341	+				-0.3
3,409,341	+				-2.7
3,409,341	+				-2.7
3,409,342	-				-1.2
3,409,388	+				+2.5
3,409,411	+				-2.0
3,409,411	+				-1.7
3,409,412	-				-1.5
3,409,418	-				-3.3
3,409,421	+				-1.8
3,409,441	+				-2.2
3,409,441	+				-1.6
3,409,442	-				-3.4
3,409,477	+		Echvi_2846	0.11	-1.8
3,409,477	+		Echvi_2846	0.11	-1.3
3,409,486	+		Echvi_2846	0.11	-3.3
3,409,487	-		Echvi_2846	0.11	+0.2
3,409,540	+		Echvi_2846	0.13	-3.4
3,409,567	+		Echvi_2846	0.14	-2.5
3,409,761	-		Echvi_2846	0.21	-1.3
3,409,802	+		Echvi_2846	0.22	-3.4
3,409,803	-		Echvi_2846	0.22	-3.0
3,409,906	+		Echvi_2846	0.26	-0.8
3,409,906	+		Echvi_2846	0.26	-2.2
3,409,906	+		Echvi_2846	0.26	-0.5
3,409,913	+		Echvi_2846	0.26	-1.7
3,409,913	+		Echvi_2846	0.26	-2.2
3,409,913	+		Echvi_2846	0.26	-1.0
3,409,913	+		Echvi_2846	0.26	-2.2
3,409,914	-		Echvi_2846	0.26	-3.1
3,409,914	-		Echvi_2846	0.26	-2.4
3,409,914	-		Echvi_2846	0.26	-0.0
3,410,017	+		Echvi_2846	0.29	-1.9
3,410,053	-		Echvi_2846	0.30	-1.5
3,410,054	+		Echvi_2846	0.31	-3.0
3,410,055	-		Echvi_2846	0.31	-1.5
3,410,076	-		Echvi_2846	0.31	-4.5
3,410,079	-		Echvi_2846	0.31	-3.0
3,410,100	+		Echvi_2846	0.32	-0.3
3,410,100	+		Echvi_2846	0.32	-3.5
3,410,100	+		Echvi_2846	0.32	-1.5
3,410,100	+		Echvi_2846	0.32	+1.0
3,410,100	+		Echvi_2846	0.32	-5.0
3,410,100	+		Echvi_2846	0.32	-1.3
3,410,100	+		Echvi_2846	0.32	-0.8
3,410,110	+		Echvi_2846	0.32	-3.0
3,410,110	+		Echvi_2846	0.32	-2.5
3,410,134	-		Echvi_2846	0.33	-1.3
3,410,304	+		Echvi_2846	0.39	-4.2
3,410,304	+		Echvi_2846	0.39	-0.3
3,410,324	-		Echvi_2846	0.40	-3.7
3,410,324	-		Echvi_2846	0.40	-2.6
3,410,325	+		Echvi_2846	0.40	-2.5
3,410,326	-		Echvi_2846	0.40	-4.1
3,410,482	+		Echvi_2846	0.45	-2.5
3,410,500	+		Echvi_2846	0.46	-2.5
3,410,500	+		Echvi_2846	0.46	-0.8
3,410,501	-		Echvi_2846	0.46	-2.2
3,410,501	-		Echvi_2846	0.46	-1.0
3,410,597	+		Echvi_2846	0.49	-2.7
3,410,597	+		Echvi_2846	0.49	-3.4
3,410,597	+		Echvi_2846	0.49	-2.5
3,410,597	+		Echvi_2846	0.49	-1.3
3,410,597	+		Echvi_2846	0.49	-3.5
3,410,598	-		Echvi_2846	0.49	-1.3
3,410,598	-		Echvi_2846	0.49	-2.3
3,410,598	-		Echvi_2846	0.49	-1.0
3,410,600	-		Echvi_2846	0.49	-2.2
3,410,652	+		Echvi_2846	0.51	-2.2
3,410,652	+		Echvi_2846	0.51	-3.8
3,410,653	-		Echvi_2846	0.51	-0.8
3,410,653	-		Echvi_2846	0.51	-1.8
3,410,653	-		Echvi_2846	0.51	-3.0
3,410,655	-		Echvi_2846	0.51	+0.9
3,410,666	+		Echvi_2846	0.51	-2.3
3,410,673	-		Echvi_2846	0.51	-1.5
3,410,760	-		Echvi_2846	0.54	-2.8
3,410,812	-		Echvi_2846	0.56	-1.6
3,410,831	+		Echvi_2846	0.57	-1.9
3,410,831	+		Echvi_2846	0.57	-2.6
3,410,843	+		Echvi_2846	0.57	-0.6
3,410,844	-		Echvi_2846	0.57	-1.9
3,410,847	+		Echvi_2846	0.57	-1.3
3,410,847	+		Echvi_2846	0.57	-2.3
3,410,847	+		Echvi_2846	0.57	-0.6
3,410,848	-		Echvi_2846	0.57	-2.0
3,410,848	-		Echvi_2846	0.57	-2.7
3,411,039	+		Echvi_2846	0.64	-1.4
3,411,039	+		Echvi_2846	0.64	-1.7
3,411,060	+		Echvi_2846	0.64	+0.0
3,411,062	+		Echvi_2846	0.64	+0.4
3,411,063	-		Echvi_2846	0.65	-1.3
3,411,101	+		Echvi_2846	0.66	-0.2
3,411,101	+		Echvi_2846	0.66	-0.6
3,411,102	-		Echvi_2846	0.66	-1.8
3,411,105	+		Echvi_2846	0.66	-1.4
3,411,105	+		Echvi_2846	0.66	-0.4
3,411,105	+				+2.5
3,411,105	+		Echvi_2846	0.66	-0.3
3,411,105	+		Echvi_2846	0.66	+0.5
3,411,105	+				-1.0
3,411,105	+		Echvi_2846	0.66	-0.2
3,411,106	-		Echvi_2846	0.66	-2.5
3,411,106	-		Echvi_2846	0.66	-0.0
3,411,106	-		Echvi_2846	0.66	-4.0
3,411,106	-		Echvi_2846	0.66	-1.0
3,411,108	+		Echvi_2846	0.66	+1.0
3,411,132	+		Echvi_2846	0.67	-1.0
3,411,132	+		Echvi_2846	0.67	+1.5
3,411,168	+		Echvi_2846	0.68	+0.7
3,411,168	+		Echvi_2846	0.68	-0.1
3,411,168	+		Echvi_2846	0.68	-0.6
3,411,168	+		Echvi_2846	0.68	+0.7
3,411,168	+		Echvi_2846	0.68	+1.7
3,411,169	-		Echvi_2846	0.68	-3.3
3,411,169	-		Echvi_2846	0.68	-2.4
3,411,187	-		Echvi_2846	0.69	-4.0
3,411,211	-		Echvi_2846	0.69	-3.3
3,411,215	+		Echvi_2846	0.70	+0.6
3,411,216	-		Echvi_2846	0.70	-3.2
3,411,220	+		Echvi_2846	0.70	+2.5
3,411,221	-		Echvi_2846	0.70	-2.9
3,411,221	-		Echvi_2846	0.70	-1.3
3,411,221	-		Echvi_2846	0.70	-0.0
3,411,225	+		Echvi_2846	0.70	-1.6
3,411,228	+		Echvi_2846	0.70	+1.0
3,411,228	+		Echvi_2846	0.70	+2.0
3,411,234	-		Echvi_2846	0.70	-2.6
3,411,278	+		Echvi_2846	0.72	-0.2
3,411,278	+		Echvi_2846	0.72	+0.3
3,411,279	-		Echvi_2846	0.72	-2.9
3,411,310	+		Echvi_2846	0.73	+1.4
3,411,310	+		Echvi_2846	0.73	+1.0
3,411,310	+		Echvi_2846	0.73	+0.2
3,411,310	+		Echvi_2846	0.73	+0.5
3,411,311	-		Echvi_2846	0.73	-2.8
3,411,311	-		Echvi_2846	0.73	-4.0
3,411,311	-		Echvi_2846	0.73	-2.5
3,411,320	-		Echvi_2846	0.73	-0.9
3,411,353	+		Echvi_2846	0.74	+0.5
3,411,354	-		Echvi_2846	0.74	-1.9
3,411,389	-		Echvi_2846	0.75	-4.1
3,411,407	+		Echvi_2846	0.76	+0.2
3,411,408	-		Echvi_2846	0.76	-0.5
3,411,411	-		Echvi_2846	0.76	-2.8
3,411,411	-		Echvi_2846	0.76	-2.1
3,411,411	-		Echvi_2846	0.76	-0.8
3,411,432	-		Echvi_2846	0.77	-4.0
3,411,439	+		Echvi_2846	0.77	+1.1
3,411,440	-		Echvi_2846	0.77	+0.5
3,411,474	-		Echvi_2846	0.78	-1.4
3,411,494	+		Echvi_2846	0.79	+1.0
3,411,495	-		Echvi_2846	0.79	-1.8
3,411,510	-		Echvi_2846	0.80	-3.5
3,411,510	-		Echvi_2846	0.80	-2.5
3,411,537	+		Echvi_2846	0.80	+3.0
3,411,537	+		Echvi_2846	0.80	+0.8
3,411,537	+		Echvi_2846	0.80	+1.8
3,411,538	-		Echvi_2846	0.81	-3.3
3,411,538	-		Echvi_2846	0.81	-3.0
3,411,538	-		Echvi_2846	0.81	-4.0
3,411,538	-		Echvi_2846	0.81	-3.5
3,411,543	+		Echvi_2846	0.81	+1.0
3,411,554	-		Echvi_2846	0.81	-3.4
3,411,556	-		Echvi_2846	0.81	-3.0
3,411,556	-		Echvi_2846	0.81	-1.0
3,411,556	-		Echvi_2846	0.81	-2.3
3,411,569	+		Echvi_2846	0.82	+0.9
3,411,569	+		Echvi_2846	0.82	+0.9
3,411,570	-		Echvi_2846	0.82	-2.9
3,411,570	-		Echvi_2846	0.82	-1.9
3,411,588	+		Echvi_2846	0.82	+0.8
3,411,589	-		Echvi_2846	0.82	-2.3
3,411,737	+		Echvi_2846	0.87	+1.6
3,411,738	-		Echvi_2846	0.87	-1.8
3,411,744	+		Echvi_2846	0.87	+2.3
3,411,774	+		Echvi_2846	0.88	+0.9
3,411,784	+		Echvi_2846	0.89	+0.4
3,411,785	-		Echvi_2846	0.89	-2.5
3,411,785	-		Echvi_2846	0.89	-2.6
3,411,798	+		Echvi_2846	0.89	+0.4
3,411,804	-		Echvi_2846	0.89	-1.7
3,411,804	-		Echvi_2846	0.89	-1.3
3,411,804	-		Echvi_2846	0.89	-1.9
3,411,824	-				-3.9
3,411,824	-				-1.3
3,411,917	+				+1.3
3,411,918	-				-3.3
3,411,953	-				-3.2
3,412,040	+				+0.8
3,412,069	-				-2.1
3,412,100	-				-4.6
3,412,100	-				-1.6
3,412,114	-				-0.2
3,412,143	+				-0.2
3,412,151	+				-0.3
3,412,153	+				+0.3
3,412,154	-				-2.8
3,412,154	-				-2.4
3,412,155	+				+1.4
3,412,156	-				-2.5
3,412,156	-				-3.5
3,412,156	-				-3.9
3,412,197	+				+0.4
3,412,219	+				+0.0
3,412,220	-				-1.8
3,412,257	+				-0.5
3,412,369	+		Echvi_2847	0.15	+0.9
3,412,369	+		Echvi_2847	0.15	+0.4
3,412,381	+		Echvi_2847	0.15	+0.3
3,412,485	+		Echvi_2847	0.22	+0.8
3,412,498	+		Echvi_2847	0.23	-0.2
3,412,498	+		Echvi_2847	0.23	+0.7
3,412,499	-		Echvi_2847	0.23	-3.4
3,412,499	-		Echvi_2847	0.23	-4.0
3,412,520	+		Echvi_2847	0.24	-0.3
3,412,521	-		Echvi_2847	0.24	-2.4
3,412,634	+		Echvi_2847	0.31	-2.0
3,412,648	+		Echvi_2847	0.32	-0.6
3,412,648	+		Echvi_2847	0.32	+2.0
3,412,651	+		Echvi_2847	0.32	+0.1
3,412,652	-		Echvi_2847	0.33	+2.5
3,412,652	-		Echvi_2847	0.33	-2.8
3,412,665	+		Echvi_2847	0.33	+1.6
3,412,666	-		Echvi_2847	0.33	-3.0
3,412,669	+		Echvi_2847	0.34	+0.7
3,412,669	+		Echvi_2847	0.34	+1.5
3,412,670	-		Echvi_2847	0.34	-1.6
3,412,670	-		Echvi_2847	0.34	-2.9
3,412,753	+		Echvi_2847	0.39	+1.5
3,412,753	+		Echvi_2847	0.39	+0.7
3,412,754	-		Echvi_2847	0.39	-1.9
3,412,770	-		Echvi_2847	0.40	-2.2
3,412,879	+		Echvi_2847	0.47	+2.5
3,412,879	+		Echvi_2847	0.47	+1.3
3,412,879	+		Echvi_2847	0.47	+1.7
3,412,879	+		Echvi_2847	0.47	+1.0
3,412,879	+		Echvi_2847	0.47	+1.8
3,412,879	+		Echvi_2847	0.47	+2.5
3,412,879	+		Echvi_2847	0.47	-0.5
3,412,879	+		Echvi_2847	0.47	+0.7
3,412,879	+		Echvi_2847	0.47	+1.0
3,412,879	+		Echvi_2847	0.47	+1.6
3,412,880	-		Echvi_2847	0.47	-1.3
3,412,880	-		Echvi_2847	0.47	-3.0
3,412,880	-		Echvi_2847	0.47	-0.5
3,412,880	-		Echvi_2847	0.47	-4.3
3,412,880	-		Echvi_2847	0.47	-2.7
3,412,880	-		Echvi_2847	0.47	-0.9
3,412,880	-		Echvi_2847	0.47	-0.3
3,412,880	-		Echvi_2847	0.47	-2.8
3,412,880	-		Echvi_2847	0.47	-0.9
3,412,881	+		Echvi_2847	0.47	+1.5
3,412,912	-		Echvi_2847	0.49	-0.0
3,412,915	+		Echvi_2847	0.49	+1.4
3,412,933	-		Echvi_2847	0.50	-2.3
3,412,942	+		Echvi_2847	0.51	+1.6
3,412,962	+		Echvi_2847	0.52	+0.4
3,412,962	+		Echvi_2847	0.52	-2.1
3,412,963	-		Echvi_2847	0.52	-4.2
3,412,963	-		Echvi_2847	0.52	-1.9
3,412,967	-		Echvi_2847	0.52	-0.9
3,412,967	-		Echvi_2847	0.52	-3.2
3,413,038	-		Echvi_2847	0.57	-2.9
3,413,047	+		Echvi_2847	0.57	+2.7
3,413,047	+		Echvi_2847	0.57	+1.0
3,413,047	+		Echvi_2847	0.57	+1.3
3,413,047	+		Echvi_2847	0.57	+3.7
3,413,048	-		Echvi_2847	0.57	-1.8