Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1984

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
2,336,402	+		Echvi_1983	0.36	-0.4
2,336,453	-		Echvi_1983	0.39	-0.4
2,336,455	+		Echvi_1983	0.39	+1.7
2,336,456	-		Echvi_1983	0.39	+1.2
2,336,477	+		Echvi_1983	0.41	-2.2
2,336,478	-		Echvi_1983	0.41	+0.0
2,336,483	+		Echvi_1983	0.41	-0.0
2,336,484	-		Echvi_1983	0.41	-1.5
2,336,484	-		Echvi_1983	0.41	+0.0
2,336,484	-		Echvi_1983	0.41	-0.8
2,336,505	+		Echvi_1983	0.42	-1.2
2,336,505	+		Echvi_1983	0.42	+1.2
2,336,506	-		Echvi_1983	0.42	-0.1
2,336,506	-		Echvi_1983	0.42	+0.9
2,336,506	-		Echvi_1983	0.42	+0.3
2,336,570	-		Echvi_1983	0.47	-1.0
2,336,593	+		Echvi_1983	0.48	+0.8
2,336,594	-		Echvi_1983	0.48	-0.7
2,336,594	-		Echvi_1983	0.48	+0.4
2,336,597	+		Echvi_1983	0.48	-0.7
2,336,642	+		Echvi_1983	0.51	+0.6
2,336,661	-		Echvi_1983	0.52	+0.3
2,336,717	+		Echvi_1983	0.56	+1.0
2,336,717	+		Echvi_1983	0.56	-0.2
2,336,717	+		Echvi_1983	0.56	-0.7
2,336,717	+		Echvi_1983	0.56	+0.1
2,336,718	-		Echvi_1983	0.56	+0.3
2,336,718	-		Echvi_1983	0.56	-0.1
2,336,775	+		Echvi_1983	0.60	+0.1
2,336,775	+		Echvi_1983	0.60	-0.3
2,336,775	+		Echvi_1983	0.60	+0.7
2,336,776	-		Echvi_1983	0.60	-0.9
2,336,799	-		Echvi_1983	0.61	+0.7
2,336,804	+		Echvi_1983	0.61	+1.0
2,336,826	-		Echvi_1983	0.63	-0.1
2,336,827	+		Echvi_1983	0.63	-0.4
2,336,827	+		Echvi_1983	0.63	-0.3
2,336,829	+		Echvi_1983	0.63	+0.7
2,336,830	-		Echvi_1983	0.63	-0.9
2,336,830	-		Echvi_1983	0.63	-0.8
2,336,838	+		Echvi_1983	0.64	+1.0
2,336,838	+		Echvi_1983	0.64	-0.7
2,336,839	-		Echvi_1983	0.64	+0.4
2,336,839	-		Echvi_1983	0.64	-0.9
2,336,861	+		Echvi_1983	0.65	+0.9
2,336,915	+		Echvi_1983	0.69	+1.3
2,336,915	+		Echvi_1983	0.69	-1.6
2,336,916	-		Echvi_1983	0.69	-0.9
2,336,917	+		Echvi_1983	0.69	+2.9
2,336,924	-		Echvi_1983	0.69	+0.4
2,336,924	-		Echvi_1983	0.69	+0.4
2,336,924	-		Echvi_1983	0.69	+0.8
2,336,924	-		Echvi_1983	0.69	-0.3
2,336,925	+		Echvi_1983	0.69	+0.5
2,336,925	+		Echvi_1983	0.69	+0.4
2,336,959	+		Echvi_1983	0.71	-1.3
2,336,959	+		Echvi_1983	0.71	-0.4
2,336,963	+		Echvi_1983	0.72	-0.0
2,336,978	-				+1.7
2,336,978	-		Echvi_1983	0.73	+0.7
2,337,047	+		Echvi_1983	0.77	-0.0
2,337,047	+		Echvi_1983	0.77	+0.1
2,337,061	+		Echvi_1983	0.78	+0.6
2,337,156	+		Echvi_1983	0.84	-1.1
2,337,157	-		Echvi_1983	0.84	-0.6
2,337,167	-		Echvi_1983	0.85	+1.2
2,337,191	-		Echvi_1983	0.86	-0.1
2,337,209	-		Echvi_1983	0.87	-0.5
2,337,209	-		Echvi_1983	0.87	-0.3
2,337,209	-		Echvi_1983	0.87	+1.2
2,337,211	+		Echvi_1983	0.87	+0.3
2,337,211	+		Echvi_1983	0.87	+1.0
2,337,212	-		Echvi_1983	0.87	-0.7
2,337,226	+		Echvi_1983	0.88	-0.2
2,337,230	-		Echvi_1983	0.89	+0.4
2,337,265	+				+0.1
2,337,296	+				-0.3
2,337,297	-				+0.4
2,337,320	+				+0.4
2,337,330	+				+0.9
2,337,330	+				-0.5
2,337,331	-				+0.7
2,337,338	-				+0.4
2,337,340	-				+0.0
2,337,363	-				-0.7
2,337,368	-				-0.5
2,337,371	+				+0.1
2,337,372	-				+0.7
2,337,394	+				+1.0
2,337,425	+				+1.7
2,337,455	+				-2.4
2,337,630	+		Echvi_1984	0.17	-1.3
2,337,707	+		Echvi_1984	0.23	+0.3
2,337,719	+		Echvi_1984	0.24	-2.3
2,337,721	+		Echvi_1984	0.24	+0.6
2,337,721	+		Echvi_1984	0.24	-1.5
2,337,818	+		Echvi_1984	0.31	-1.5
2,337,818	+		Echvi_1984	0.31	-1.6
2,337,827	+		Echvi_1984	0.32	-1.2
2,337,827	+		Echvi_1984	0.32	+0.6
2,337,829	+		Echvi_1984	0.32	-2.0
2,338,034	+		Echvi_1984	0.47	-2.4
2,338,076	+		Echvi_1984	0.50	-1.3
2,338,076	+		Echvi_1984	0.50	-1.0
2,338,253	+		Echvi_1984	0.63	-1.5
2,338,302	+		Echvi_1984	0.67	-2.2
2,338,302	+		Echvi_1984	0.67	-1.5
2,338,321	+		Echvi_1984	0.68	-0.8
2,338,321	+		Echvi_1984	0.68	-1.5
2,338,321	+		Echvi_1984	0.68	-1.9
2,338,354	+		Echvi_1984	0.71	-1.7
2,338,354	+		Echvi_1984	0.71	-2.3
2,338,354	+		Echvi_1984	0.71	-1.5
2,338,418	+		Echvi_1984	0.75	-1.4
2,338,615	+		Echvi_1984	0.90	-2.1
2,338,718	+				-2.1
2,338,730	+				-2.2
2,338,730	+				-0.5
2,338,751	+				-1.5
2,338,756	-				-1.6
2,338,838	-				+0.4
2,338,838	-				+0.3
2,338,841	-				-0.4
2,338,908	-				+0.5
2,338,939	+				-0.6
2,338,940	-				-1.2
2,338,942	+				+0.5
2,338,974	-				+0.5
2,338,985	+				+0.7
2,338,985	+				+0.4
2,338,995	+				+1.2
2,338,995	+				+0.1
2,339,091	+				-0.7
2,339,104	+				+0.1
2,339,141	+				-1.4
2,339,144	+				-0.1
2,339,144	+				+0.5
2,339,145	-				-3.0
2,339,145	-				-0.7
2,339,161	+				-1.9
2,339,161	+				+0.8
2,339,161	+				-0.5
2,339,173	+				+0.2
2,339,173	+				-0.0
2,339,173	+				-0.8
2,339,173	+				-1.6
2,339,174	-				+0.2
2,339,199	+				+0.0
2,339,203	+				+0.5
2,339,204	-				-0.0
2,339,204	-				-0.7
2,339,204	-				-0.3
2,339,230	-				+0.6
2,339,247	+		Echvi_1985	0.11	+0.3
2,339,248	-		Echvi_1985	0.11	+0.1
2,339,248	-		Echvi_1985	0.11	+0.5
2,339,249	+		Echvi_1985	0.11	-0.3
2,339,249	+		Echvi_1985	0.11	+0.9
2,339,250	-		Echvi_1985	0.11	-0.6
2,339,250	-		Echvi_1985	0.11	+0.3
2,339,263	+		Echvi_1985	0.13	+0.8
2,339,263	+		Echvi_1985	0.13	+0.3
2,339,264	-		Echvi_1985	0.13	-2.0
2,339,267	+		Echvi_1985	0.14	+0.1
2,339,279	+		Echvi_1985	0.15	-1.0
2,339,279	+		Echvi_1985	0.15	-0.4
2,339,279	+		Echvi_1985	0.15	-0.8
2,339,279	+		Echvi_1985	0.15	-0.1
2,339,280	-		Echvi_1985	0.16	+0.9
2,339,280	-		Echvi_1985	0.16	-0.8
2,339,319	+		Echvi_1985	0.21	-0.6
2,339,320	-		Echvi_1985	0.21	+0.0
2,339,337	-		Echvi_1985	0.24	+0.3
2,339,339	+		Echvi_1985	0.24	+0.2
2,339,339	+		Echvi_1985	0.24	-1.2
2,339,340	-		Echvi_1985	0.24	+1.2
2,339,361	+		Echvi_1985	0.27	+1.7
2,339,374	-		Echvi_1985	0.29	-1.0
2,339,376	+		Echvi_1985	0.29	+0.7
2,339,403	+		Echvi_1985	0.33	-0.0
2,339,404	-		Echvi_1985	0.33	+0.5
2,339,404	-		Echvi_1985	0.33	-1.0
2,339,406	+		Echvi_1985	0.34	+1.2
2,339,435	+		Echvi_1985	0.38	-0.5
2,339,436	-		Echvi_1985	0.38	-0.8
2,339,471	+		Echvi_1985	0.43	-0.5
2,339,471	+		Echvi_1985	0.43	-0.4
2,339,471	+		Echvi_1985	0.43	+0.0
2,339,472	-		Echvi_1985	0.43	+0.0
2,339,497	-				+1.7
2,339,519	+		Echvi_1985	0.50	+2.3
2,339,554	-		Echvi_1985	0.55	+0.4
2,339,556	+		Echvi_1985	0.55	+0.9
2,339,568	+		Echvi_1985	0.57	+0.4
2,339,612	+		Echvi_1985	0.63	+0.2
2,339,653	-		Echvi_1985	0.69	+0.7
2,339,653	-		Echvi_1985	0.69	-0.3
2,339,655	+		Echvi_1985	0.70	+1.2
2,339,656	-		Echvi_1985	0.70	-1.6
2,339,656	-		Echvi_1985	0.70	+1.0
2,339,664	+		Echvi_1985	0.71	+0.5
2,339,664	+		Echvi_1985	0.71	-2.3
2,339,668	-		Echvi_1985	0.72	-1.6
2,339,708	+		Echvi_1985	0.77	-0.5
2,339,709	-		Echvi_1985	0.77	-0.5
2,339,709	-		Echvi_1985	0.77	+0.6
2,339,716	-		Echvi_1985	0.78	-0.4
2,339,731	-		Echvi_1985	0.81	+0.1