Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1622

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,869,262	+		Echvi_1621	0.69	-0.5
1,869,262	+		Echvi_1621	0.69	-1.0
1,869,263	-		Echvi_1621	0.69	-0.4
1,869,263	-		Echvi_1621	0.69	-0.3
1,869,281	-		Echvi_1621	0.70	+0.5
1,869,301	+		Echvi_1621	0.70	-0.1
1,869,312	+		Echvi_1621	0.71	-0.0
1,869,315	+		Echvi_1621	0.71	-0.3
1,869,315	+		Echvi_1621	0.71	+1.0
1,869,315	+		Echvi_1621	0.71	-1.1
1,869,315	+		Echvi_1621	0.71	+0.5
1,869,315	+		Echvi_1621	0.71	-1.1
1,869,315	+		Echvi_1621	0.71	-1.0
1,869,316	-		Echvi_1621	0.71	-0.3
1,869,316	-		Echvi_1621	0.71	+0.2
1,869,375	-		Echvi_1621	0.73	+0.8
1,869,375	-		Echvi_1621	0.73	-2.1
1,869,403	+		Echvi_1621	0.74	+1.7
1,869,404	-		Echvi_1621	0.74	-0.9
1,869,488	+		Echvi_1621	0.76	+2.1
1,869,502	+		Echvi_1621	0.77	+0.0
1,869,503	-		Echvi_1621	0.77	-0.2
1,869,503	-		Echvi_1621	0.77	-1.7
1,869,525	-		Echvi_1621	0.77	+0.3
1,869,591	-		Echvi_1621	0.79	-0.9
1,869,591	-		Echvi_1621	0.79	-0.1
1,869,591	-		Echvi_1621	0.79	-0.3
1,869,591	-		Echvi_1621	0.79	+0.7
1,869,658	-		Echvi_1621	0.82	+0.0
1,869,688	-		Echvi_1621	0.83	-0.3
1,869,699	-		Echvi_1621	0.83	+1.7
1,869,701	+		Echvi_1621	0.83	+0.8
1,869,701	+		Echvi_1621	0.83	+1.4
1,869,701	+		Echvi_1621	0.83	+0.9
1,869,760	-		Echvi_1621	0.85	+0.4
1,869,762	-		Echvi_1621	0.85	-0.6
1,869,779	+		Echvi_1621	0.85	-1.3
1,869,780	-		Echvi_1621	0.85	-0.6
1,869,848	+		Echvi_1621	0.88	+0.6
1,869,885	+		Echvi_1621	0.89	+0.4
1,869,886	-		Echvi_1621	0.89	-1.6
1,869,897	-		Echvi_1621	0.89	+0.0
1,869,897	-		Echvi_1621	0.89	-1.5
1,870,006	-				+0.3
1,870,037	+				-1.6
1,870,037	+				-0.2
1,870,038	-				+0.2
1,870,101	+				-0.5
1,870,104	-				-1.0
1,870,104	-				-1.0
1,870,137	+				+0.1
1,870,216	+				-1.1
1,870,216	+				-0.6
1,870,217	-				-1.3
1,870,281	+				+0.6
1,870,281	+				+0.0
1,870,282	-				+0.5
1,870,283	+				+0.2
1,870,286	+				+0.0
1,870,286	+				-0.6
1,870,286	+				+0.7
1,870,286	+				+0.5
1,870,287	-				+1.7
1,870,287	-				+1.0
1,870,287	-				-0.5
1,870,287	-				+0.6
1,870,378	-				-1.1
1,870,419	+		Echvi_1622	0.10	-0.8
1,870,420	-		Echvi_1622	0.11	+0.4
1,870,482	-		Echvi_1622	0.15	-0.6
1,870,482	-		Echvi_1622	0.15	-0.8
1,870,515	+		Echvi_1622	0.17	-0.2
1,870,516	-		Echvi_1622	0.17	-1.8
1,870,518	-		Echvi_1622	0.17	-0.3
1,870,530	-		Echvi_1622	0.18	-0.9
1,870,587	+		Echvi_1622	0.22	-0.7
1,870,592	+		Echvi_1622	0.22	-0.6
1,870,592	+		Echvi_1622	0.22	+0.5
1,870,592	+		Echvi_1622	0.22	+0.4
1,870,593	-		Echvi_1622	0.22	+0.2
1,870,593	-		Echvi_1622	0.22	-1.7
1,870,595	+		Echvi_1622	0.22	+0.7
1,870,595	+		Echvi_1622	0.22	-0.1
1,870,699	+		Echvi_1622	0.29	-0.5
1,870,699	+		Echvi_1622	0.29	-2.3
1,870,699	+		Echvi_1622	0.29	-0.7
1,870,700	-		Echvi_1622	0.29	+0.1
1,870,700	-		Echvi_1622	0.29	-1.4
1,870,701	+		Echvi_1622	0.29	-1.3
1,870,701	+		Echvi_1622	0.29	-0.5
1,870,702	-		Echvi_1622	0.29	-0.2
1,870,702	-		Echvi_1622	0.29	-0.1
1,870,702	-		Echvi_1622	0.29	+0.3
1,870,844	+		Echvi_1622	0.39	+0.2
1,870,860	+		Echvi_1622	0.40	-2.6
1,870,861	-		Echvi_1622	0.40	+0.0
1,870,861	-		Echvi_1622	0.40	-2.5
1,870,862	+		Echvi_1622	0.40	-0.3
1,870,862	+		Echvi_1622	0.40	-0.4
1,870,862	+		Echvi_1622	0.40	-0.5
1,870,924	+		Echvi_1622	0.44	+1.3
1,870,925	-		Echvi_1622	0.44	+0.1
1,870,925	-		Echvi_1622	0.44	-0.5
1,870,926	+		Echvi_1622	0.44	-1.3
1,870,926	+		Echvi_1622	0.44	+1.3
1,870,926	+		Echvi_1622	0.44	+0.5
1,870,926	+		Echvi_1622	0.44	+0.6
1,870,926	+		Echvi_1622	0.44	-0.2
1,870,926	+		Echvi_1622	0.44	-1.1
1,870,927	-		Echvi_1622	0.44	+0.5
1,870,927	-		Echvi_1622	0.44	+2.1
1,870,927	-		Echvi_1622	0.44	+0.0
1,870,927	-		Echvi_1622	0.44	+2.4
1,870,927	-		Echvi_1622	0.44	+0.4
1,870,927	-		Echvi_1622	0.44	-0.7
1,870,927	-		Echvi_1622	0.44	-0.7
1,871,053	-		Echvi_1622	0.52	+0.4
1,871,053	-		Echvi_1622	0.52	-0.7
1,871,061	-		Echvi_1622	0.53	-1.4
1,871,070	+		Echvi_1622	0.53	-1.6
1,871,076	-		Echvi_1622	0.54	-0.8
1,871,117	-		Echvi_1622	0.57	+1.1
1,871,145	+		Echvi_1622	0.58	+0.3
1,871,145	+		Echvi_1622	0.58	-0.3
1,871,145	+		Echvi_1622	0.58	-0.8
1,871,145	+		Echvi_1622	0.58	-1.0
1,871,155	-		Echvi_1622	0.59	+0.2
1,871,302	-		Echvi_1622	0.69	+0.6
1,871,302	-		Echvi_1622	0.69	-0.6
1,871,304	-		Echvi_1622	0.69	+1.1
1,871,416	-		Echvi_1622	0.76	+0.1
1,871,544	+		Echvi_1622	0.85	-1.4
1,871,544	+		Echvi_1622	0.85	+0.3
1,871,544	+		Echvi_1622	0.85	-0.6
1,871,545	-		Echvi_1622	0.85	-0.4
1,871,545	-		Echvi_1622	0.85	+0.2
1,871,709	+				+1.0
1,871,738	-				+0.4
1,871,752	-				+0.7
1,871,773	-				-0.4
1,871,773	-				-0.5
1,871,773	-				+0.5
1,871,786	-				-0.8
1,871,789	-				-1.5
1,871,793	-				-0.7
1,871,803	+				-0.5
1,871,803	+				+0.0
1,871,804	-				+0.6
1,871,804	-				+0.0
1,871,806	+				-2.0
1,871,807	-				-0.5
1,871,807	-				+0.3
1,871,811	+				+1.6
1,871,843	+				+0.7
1,871,908	-				+2.5
1,871,932	+				+0.3
1,871,935	-				-1.6
1,872,062	-		Echvi_1623	0.14	+0.6
1,872,062	-		Echvi_1623	0.14	-0.7
1,872,086	-		Echvi_1623	0.17	+0.3
1,872,205	+		Echvi_1623	0.28	-0.3
1,872,207	+		Echvi_1623	0.28	+0.4
1,872,207	+		Echvi_1623	0.28	+1.5
1,872,314	-		Echvi_1623	0.38	-1.7
1,872,503	-		Echvi_1623	0.55	+0.7
1,872,517	-		Echvi_1623	0.57	+0.5
1,872,526	+		Echvi_1623	0.58	-0.2
1,872,526	+		Echvi_1623	0.58	-1.4
1,872,527	-		Echvi_1623	0.58	-0.3
1,872,527	-		Echvi_1623	0.58	+0.4
1,872,536	-		Echvi_1623	0.58	-1.3
1,872,538	-		Echvi_1623	0.59	-1.5
1,872,613	+		Echvi_1623	0.66	+0.4
1,872,614	-		Echvi_1623	0.66	+0.0
1,872,614	-		Echvi_1623	0.66	-0.9
1,872,614	-		Echvi_1623	0.66	+0.4
1,872,614	-		Echvi_1623	0.66	-1.1
1,872,751	+		Echvi_1623	0.78	+1.2
1,872,752	-		Echvi_1623	0.79	-0.1