Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1295

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,489,040	+				+1.1
1,489,091	+				+1.9
1,489,125	-				-0.7
1,489,267	+				-1.7
1,489,304	-				+0.3
1,489,336	-		Echvi_1294	0.12	+0.8
1,489,358	+		Echvi_1294	0.16	-0.3
1,489,358	+		Echvi_1294	0.16	-0.9
1,489,359	-		Echvi_1294	0.16	+1.3
1,489,359	-		Echvi_1294	0.16	+0.3
1,489,361	+		Echvi_1294	0.16	+0.3
1,489,361	+		Echvi_1294	0.16	+0.1
1,489,365	+		Echvi_1294	0.17	+2.6
1,489,366	-		Echvi_1294	0.17	-0.2
1,489,371	+		Echvi_1294	0.18	+1.2
1,489,371	+		Echvi_1294	0.18	-0.1
1,489,393	-		Echvi_1294	0.21	+1.9
1,489,415	+		Echvi_1294	0.25	+0.0
1,489,415	+		Echvi_1294	0.25	+0.7
1,489,415	+		Echvi_1294	0.25	-0.1
1,489,415	+		Echvi_1294	0.25	+0.0
1,489,415	+		Echvi_1294	0.25	+2.1
1,489,416	-		Echvi_1294	0.25	+1.3
1,489,416	-		Echvi_1294	0.25	+1.0
1,489,416	-		Echvi_1294	0.25	-0.7
1,489,416	-		Echvi_1294	0.25	-1.8
1,489,540	+		Echvi_1294	0.44	-1.3
1,489,550	+		Echvi_1294	0.46	-1.0
1,489,550	+		Echvi_1294	0.46	+1.3
1,489,550	+		Echvi_1294	0.46	+1.9
1,489,551	-		Echvi_1294	0.46	+0.6
1,489,551	-		Echvi_1294	0.46	-0.9
1,489,555	+		Echvi_1294	0.47	+0.2
1,489,555	+		Echvi_1294	0.47	+1.1
1,489,556	-		Echvi_1294	0.47	+2.4
1,489,556	-		Echvi_1294	0.47	-0.2
1,489,562	-		Echvi_1294	0.48	+0.3
1,489,609	-		Echvi_1294	0.55	-0.8
1,489,652	-		Echvi_1294	0.62	-0.2
1,489,742	+		Echvi_1294	0.76	+1.0
1,489,743	-		Echvi_1294	0.76	+0.3
1,489,744	+		Echvi_1294	0.77	+0.0
1,489,744	+		Echvi_1294	0.77	-1.3
1,489,745	-		Echvi_1294	0.77	-0.3
1,489,854	+				-0.1
1,489,854	+				-1.3
1,489,854	+				-0.9
1,489,855	-				-1.1
1,489,855	-				+1.3
1,489,972	+				-1.2
1,489,973	-				-1.0
1,489,973	-				-0.0
1,489,986	+				-0.1
1,489,986	+				+0.9
1,489,987	-				-2.9
1,489,987	-				-2.8
1,489,988	+				-0.7
1,489,988	+				+1.4
1,489,989	-				-3.4
1,489,989	-				-2.1
1,489,993	-				+0.9
1,489,995	+				+0.4
1,490,003	+				-0.5
1,490,003	+				-1.2
1,490,003	+				+0.0
1,490,004	-				-1.3
1,490,004	-				-3.6
1,490,004	-				-2.8
1,490,004	-				-2.0
1,490,004	-				-3.7
1,490,004	-				-4.4
1,490,029	-				-1.6
1,490,029	-				-1.7
1,490,085	+				-2.4
1,490,085	+				-2.0
1,490,085	+				-2.0
1,490,085	+				-3.5
1,490,086	-				-3.0
1,490,086	-				-4.1
1,490,086	-				-3.3
1,490,091	+				-3.1
1,490,092	-				-2.8
1,490,092	-				-3.2
1,490,149	+		Echvi_1295	0.12	-2.4
1,490,162	-		Echvi_1295	0.13	-3.1
1,490,201	+		Echvi_1295	0.16	-2.2
1,490,222	+		Echvi_1295	0.17	-1.3
1,490,222	+		Echvi_1295	0.17	-0.1
1,490,246	-		Echvi_1295	0.19	-3.0
1,490,246	-		Echvi_1295	0.19	-2.7
1,490,278	-		Echvi_1295	0.22	-3.8
1,490,300	+		Echvi_1295	0.24	-3.7
1,490,372	+		Echvi_1295	0.30	+0.9
1,490,400	+		Echvi_1295	0.32	-2.2
1,490,400	+		Echvi_1295	0.32	-2.2
1,490,400	+		Echvi_1295	0.32	-4.8
1,490,400	+		Echvi_1295	0.32	-2.9
1,490,401	-		Echvi_1295	0.32	-2.7
1,490,401	-		Echvi_1295	0.32	-4.7
1,490,403	+		Echvi_1295	0.32	-1.7
1,490,404	-		Echvi_1295	0.32	-2.4
1,490,404	-		Echvi_1295	0.32	-2.8
1,490,412	-		Echvi_1295	0.33	-2.3
1,490,483	+		Echvi_1295	0.39	-3.2
1,490,492	+		Echvi_1295	0.39	-1.5
1,490,492	+		Echvi_1295	0.39	-1.8
1,490,492	+		Echvi_1295	0.39	-3.1
1,490,493	-		Echvi_1295	0.39	-1.5
1,490,518	+		Echvi_1295	0.41	-4.1
1,490,519	-		Echvi_1295	0.42	-0.5
1,490,531	+		Echvi_1295	0.42	-3.8
1,490,555	-		Echvi_1295	0.44	-3.2
1,490,555	-		Echvi_1295	0.44	-3.8
1,490,646	-		Echvi_1295	0.52	-4.2
1,490,701	-		Echvi_1295	0.56	-1.5
1,490,715	-		Echvi_1295	0.57	-3.0
1,490,726	+		Echvi_1295	0.58	-2.2
1,490,727	-		Echvi_1295	0.58	-2.6
1,490,727	-		Echvi_1295	0.58	-4.1
1,490,727	-		Echvi_1295	0.58	-3.1
1,490,727	-		Echvi_1295	0.58	-1.7
1,490,781	+		Echvi_1295	0.63	+0.3
1,490,782	-		Echvi_1295	0.63	-3.1
1,490,841	+		Echvi_1295	0.68	-1.7
1,490,867	+		Echvi_1295	0.70	-0.7
1,490,868	-		Echvi_1295	0.70	-3.2
1,490,874	-		Echvi_1295	0.70	-1.1
1,490,874	-		Echvi_1295	0.70	-2.5
1,490,937	+		Echvi_1295	0.75	-0.7
1,490,937	+		Echvi_1295	0.75	-1.9
1,490,937	+		Echvi_1295	0.75	-0.7
1,490,937	+		Echvi_1295	0.75	-0.7
1,490,937	+		Echvi_1295	0.75	-3.3
1,490,937	+		Echvi_1295	0.75	-3.3
1,490,938	-		Echvi_1295	0.76	-2.4
1,490,938	-		Echvi_1295	0.76	-2.4
1,490,938	-		Echvi_1295	0.76	-2.1
1,490,938	-		Echvi_1295	0.76	-0.4
1,490,938	-		Echvi_1295	0.76	-4.2
1,490,938	-		Echvi_1295	0.76	-2.2
1,490,946	+		Echvi_1295	0.76	+0.3
1,490,992	+		Echvi_1295	0.80	+0.9
1,490,992	+		Echvi_1295	0.80	-0.5
1,490,992	+		Echvi_1295	0.80	-1.5
1,490,992	+		Echvi_1295	0.80	-2.5
1,490,993	-		Echvi_1295	0.80	-2.7
1,490,993	-		Echvi_1295	0.80	+0.9
1,490,993	-		Echvi_1295	0.80	-3.1
1,490,993	-		Echvi_1295	0.80	-2.7
1,490,993	-		Echvi_1295	0.80	-3.4
1,490,993	-		Echvi_1295	0.80	-4.5
1,490,993	-		Echvi_1295	0.80	-2.7
1,490,993	-		Echvi_1295	0.80	-2.0
1,490,993	-		Echvi_1295	0.80	-1.0
1,490,993	-		Echvi_1295	0.80	-2.3
1,490,993	-		Echvi_1295	0.80	-0.7
1,490,994	+		Echvi_1295	0.80	-2.2
1,490,994	+		Echvi_1295	0.80	-3.0
1,490,995	-		Echvi_1295	0.80	-1.6
1,490,995	-		Echvi_1295	0.80	-4.7
1,490,996	+		Echvi_1295	0.80	-0.7
1,490,996	+		Echvi_1295	0.80	-2.3
1,490,997	-		Echvi_1295	0.80	-2.5
1,490,997	-		Echvi_1295	0.80	-3.2
1,490,997	-		Echvi_1295	0.80	-0.7
1,490,997	-		Echvi_1295	0.80	-1.1
1,490,997	-		Echvi_1295	0.80	-0.3
1,490,997	-		Echvi_1295	0.80	-1.6
1,491,009	+		Echvi_1295	0.81	-2.7
1,491,010	-		Echvi_1295	0.81	-4.3
1,491,010	-		Echvi_1295	0.81	-3.7
1,491,010	-		Echvi_1295	0.81	-1.6
1,491,011	+		Echvi_1295	0.81	-3.2
1,491,011	+		Echvi_1295	0.81	-2.8
1,491,011	+		Echvi_1295	0.81	-0.1
1,491,011	+		Echvi_1295	0.81	-1.8
1,491,011	+		Echvi_1295	0.81	-3.6
1,491,011	+		Echvi_1295	0.81	-1.3
1,491,011	+		Echvi_1295	0.81	-2.7
1,491,011	+		Echvi_1295	0.81	-0.7
1,491,011	+		Echvi_1295	0.81	-2.0
1,491,011	+		Echvi_1295	0.81	-2.1
1,491,011	+		Echvi_1295	0.81	-5.5
1,491,011	+		Echvi_1295	0.81	-1.3
1,491,011	+		Echvi_1295	0.81	-2.0
1,491,012	-		Echvi_1295	0.82	-2.9
1,491,012	-		Echvi_1295	0.82	-2.1
1,491,012	-		Echvi_1295	0.82	-1.8
1,491,012	-		Echvi_1295	0.82	-3.5
1,491,012	-		Echvi_1295	0.82	-2.9
1,491,013	+		Echvi_1295	0.82	-2.5
1,491,013	+		Echvi_1295	0.82	-0.1
1,491,013	+		Echvi_1295	0.82	-3.4
1,491,013	+		Echvi_1295	0.82	-1.6
1,491,013	+		Echvi_1295	0.82	-2.8
1,491,013	+		Echvi_1295	0.82	-2.6
1,491,013	+		Echvi_1295	0.82	-1.3
1,491,013	+		Echvi_1295	0.82	-1.0
1,491,013	+		Echvi_1295	0.82	-2.8
1,491,013	+		Echvi_1295	0.82	-2.3
1,491,013	+		Echvi_1295	0.82	-3.7
1,491,013	+		Echvi_1295	0.82	-1.8
1,491,014	-		Echvi_1295	0.82	-1.5
1,491,014	-		Echvi_1295	0.82	-2.1
1,491,014	-		Echvi_1295	0.82	-1.3
1,491,014	-		Echvi_1295	0.82	+0.1
1,491,014	-		Echvi_1295	0.82	-3.2
1,491,014	-		Echvi_1295	0.82	-1.1
1,491,014	-		Echvi_1295	0.82	-2.7
1,491,014	-		Echvi_1295	0.82	-2.9
1,491,014	-		Echvi_1295	0.82	-2.8
1,491,014	-		Echvi_1295	0.82	-2.0
1,491,014	-		Echvi_1295	0.82	-2.1
1,491,014	-		Echvi_1295	0.82	-2.8
1,491,014	-		Echvi_1295	0.82	-3.2
1,491,027	-		Echvi_1295	0.83	-4.2
1,491,073	+		Echvi_1295	0.86	-4.1
1,491,099	+		Echvi_1295	0.89	-1.8
1,491,123	+				-2.7
1,491,123	+				-2.1
1,491,123	+				-2.1
1,491,124	-				-4.3
1,491,124	-				-1.5
1,491,125	+				-1.8
1,491,152	-				+1.9
1,491,152	-				-1.0
1,491,161	-				-4.3
1,491,161	-				-1.7
1,491,212	-				-0.1
1,491,230	-				-4.3
1,491,237	+				-1.3
1,491,237	+				+0.3
1,491,237	+				-0.3
1,491,237	+				+0.7
1,491,237	+				+0.1
1,491,238	-				+0.1
1,491,238	-				-0.5
1,491,238	-				-0.1
1,491,238	-				+0.5
1,491,242	-				+0.0
1,491,300	+				-0.7
1,491,301	-				-1.9
1,491,303	-				+0.0
1,491,304	+				-1.1
1,491,305	-				+0.7
1,491,305	-				-1.1
1,491,308	+				-0.1
1,491,349	-				+0.6
1,491,510	+				-1.6
1,491,510	+				+0.7
1,491,514	+				-0.3
1,491,542	+				+0.6
1,491,542	+				-2.7
1,491,542	+				-0.7
1,491,599	+				+0.1
1,491,653	-				-0.1
1,491,653	-				-0.1
1,491,661	+				-0.1
1,491,662	-				+0.6
1,491,670	+				-1.0
1,491,671	-				+0.3
1,491,671	-				-0.6
1,491,718	-				+0.9
1,491,729	+				-0.9
1,491,730	-				-0.3
1,491,730	-				-0.1
1,491,730	-				-0.3
1,491,730	-				+0.9
1,491,730	-				-0.8
1,491,734	-				-0.6
1,491,747	-				-0.9
1,491,747	-				-0.5
1,491,747	-				+1.0
1,491,795	+				+0.4
1,491,859	+				+1.4
1,491,859	+				+0.9
1,491,859	+				+1.4
1,491,859	+				+0.1
1,491,861	+				-0.4