Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1256

Experiment: a-Cyclodextrin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	a-Cyclodextrin (C)
1,441,001	+				+0.4
1,441,001	+				+1.2
1,441,002	-				-0.7
1,441,047	+				-1.1
1,441,048	-				-1.0
1,441,049	+				-0.1
1,441,050	-				+0.9
1,441,050	-				+0.0
1,441,050	-				+0.1
1,441,059	-				-0.9
1,441,076	-				-1.4
1,441,080	+				-0.7
1,441,141	-		Echvi_1254	0.28	+0.7
1,441,169	-		Echvi_1254	0.36	-1.7
1,441,173	+		Echvi_1254	0.37	+0.6
1,441,173	+		Echvi_1254	0.37	-0.3
1,441,173	+		Echvi_1254	0.37	+0.9
1,441,270	+		Echvi_1254	0.65	+0.5
1,441,271	-		Echvi_1254	0.66	-0.7
1,441,395	-				-0.1
1,441,405	+				-1.0
1,441,536	-				-0.7
1,441,536	-				+0.8
1,441,548	-				-0.3
1,441,600	-		Echvi_1255	0.15	-1.5
1,441,604	-		Echvi_1255	0.16	-1.5
1,441,635	+		Echvi_1255	0.23	-0.5
1,441,635	+		Echvi_1255	0.23	-0.6
1,441,635	+		Echvi_1255	0.23	+0.3
1,441,636	-		Echvi_1255	0.23	-1.2
1,441,715	+		Echvi_1255	0.41	+0.9
1,441,715	+		Echvi_1255	0.41	-2.0
1,441,715	+		Echvi_1255	0.41	+1.9
1,441,715	+		Echvi_1255	0.41	-0.3
1,441,716	-		Echvi_1255	0.41	-1.8
1,441,780	+		Echvi_1255	0.56	-0.8
1,441,917	+		Echvi_1255	0.86	-0.1
1,441,917	+		Echvi_1255	0.86	-0.7
1,441,983	+				-4.2
1,442,016	-				-4.0
1,442,027	+				-1.9
1,442,028	-				-1.6
1,442,028	-				-0.0
1,442,032	+				-2.2
1,442,094	+		Echvi_1256	0.13	-2.9
1,442,098	-		Echvi_1256	0.14	-1.0
1,442,225	+		Echvi_1256	0.28	-2.9
1,442,235	+		Echvi_1256	0.29	-0.4
1,442,235	+		Echvi_1256	0.29	+0.9
1,442,248	+		Echvi_1256	0.30	-2.4
1,442,249	-		Echvi_1256	0.31	-2.5
1,442,324	+		Echvi_1256	0.39	-2.6
1,442,326	+		Echvi_1256	0.39	-0.7
1,442,326	+		Echvi_1256	0.39	-0.5
1,442,327	-		Echvi_1256	0.39	-3.3
1,442,377	+		Echvi_1256	0.45	-0.5
1,442,395	+		Echvi_1256	0.47	-3.4
1,442,476	+		Echvi_1256	0.56	-1.3
1,442,476	+		Echvi_1256	0.56	+0.9
1,442,476	+		Echvi_1256	0.56	-0.7
1,442,476	+		Echvi_1256	0.56	-0.8
1,442,478	+		Echvi_1256	0.56	-1.3
1,442,478	+		Echvi_1256	0.56	-2.8
1,442,479	-		Echvi_1256	0.56	-0.9
1,442,556	+		Echvi_1256	0.65	-1.2
1,442,556	+		Echvi_1256	0.65	-3.9
1,442,557	-		Echvi_1256	0.65	-1.5
1,442,580	-		Echvi_1256	0.67	-0.5
1,442,589	+		Echvi_1256	0.68	-1.5
1,442,604	-		Echvi_1256	0.70	+0.0
1,442,604	-		Echvi_1256	0.70	-2.7
1,442,669	+		Echvi_1256	0.77	-0.5
1,442,669	+		Echvi_1256	0.77	-0.5
1,442,669	+		Echvi_1256	0.77	-1.5
1,442,669	+		Echvi_1256	0.77	-1.9
1,442,670	-		Echvi_1256	0.77	-0.8
1,442,670	-		Echvi_1256	0.77	-4.3
1,442,670	-		Echvi_1256	0.77	-2.4
1,442,673	-		Echvi_1256	0.78	-2.6
1,442,673	-		Echvi_1256	0.78	-1.5
1,442,704	-		Echvi_1256	0.81	-1.4
1,442,704	-		Echvi_1256	0.81	-1.6
1,442,748	-		Echvi_1256	0.86	-0.9
1,442,779	+		Echvi_1256	0.89	-2.2
1,442,779	+		Echvi_1256	0.89	-2.5
1,442,779	+		Echvi_1256	0.89	-3.6
1,442,780	-		Echvi_1256	0.90	-1.8
1,442,780	-		Echvi_1256	0.90	-1.6
1,442,790	-				-1.5
1,442,836	+				-1.1
1,442,836	+				-2.0
1,442,837	-				+2.3
1,443,000	+				-1.6
1,443,004	+				-0.2
1,443,004	+				+1.0
1,443,007	+				-1.3
1,443,039	-				+0.2
1,443,152	-				-0.9
1,443,197	-				+1.3
1,443,200	+				-0.5
1,443,246	+				+0.6
1,443,250	+				-0.6
1,443,251	-				+0.3
1,443,254	-				+1.2
1,443,257	+				+2.1
1,443,257	+				-0.4
1,443,258	-				-1.5
1,443,258	-				+0.5
1,443,258	-				+0.4
1,443,258	-				+0.3
1,443,258	-				+0.4
1,443,260	+				-1.0
1,443,260	+				-0.9
1,443,260	+				+0.9
1,443,261	-				+0.5
1,443,261	-				+0.5
1,443,299	+				+0.3
1,443,300	-				+1.5
1,443,303	+				+1.9
1,443,340	-				+0.4
1,443,400	+				-0.2
1,443,407	+				+1.7
1,443,408	-				-0.2
1,443,408	-				-0.9
1,443,427	+		Echvi_1257	0.12	+0.7
1,443,427	+		Echvi_1257	0.12	-1.5
1,443,427	+		Echvi_1257	0.12	+0.4
1,443,428	-		Echvi_1257	0.12	+0.8
1,443,430	+		Echvi_1257	0.13	+0.7
1,443,431	-		Echvi_1257	0.13	-1.6
1,443,431	-		Echvi_1257	0.13	+0.2
1,443,440	-		Echvi_1257	0.14	+0.3
1,443,440	-		Echvi_1257	0.14	+0.4
1,443,445	+		Echvi_1257	0.15	-0.9
1,443,445	+		Echvi_1257	0.15	-0.5
1,443,486	-		Echvi_1257	0.21	-0.7
1,443,494	-		Echvi_1257	0.23	+1.9
1,443,524	+		Echvi_1257	0.27	+0.2
1,443,524	+		Echvi_1257	0.27	-0.9
1,443,524	+		Echvi_1257	0.27	-0.7
1,443,525	-		Echvi_1257	0.27	+1.9
1,443,525	-		Echvi_1257	0.27	-0.6
1,443,525	-		Echvi_1257	0.27	+0.3
1,443,526	+		Echvi_1257	0.27	+0.9
1,443,558	-		Echvi_1257	0.32	+0.6
1,443,564	+		Echvi_1257	0.33	+0.7
1,443,564	+		Echvi_1257	0.33	+1.0
1,443,565	-		Echvi_1257	0.33	-0.7
1,443,565	-		Echvi_1257	0.33	+0.6
1,443,565	-		Echvi_1257	0.33	+0.6
1,443,639	-		Echvi_1257	0.45	+0.6
1,443,681	-		Echvi_1257	0.51	-0.1
1,443,690	+		Echvi_1257	0.53	+3.2
1,443,757	+		Echvi_1257	0.63	-0.1
1,443,794	+		Echvi_1257	0.69	-0.9
1,443,795	-		Echvi_1257	0.69	+1.0
1,443,795	-		Echvi_1257	0.69	+0.4
1,443,817	+		Echvi_1257	0.72	-2.1
1,443,817	+		Echvi_1257	0.72	+0.3
1,443,817	+		Echvi_1257	0.72	+0.5
1,443,817	+		Echvi_1257	0.72	-1.6
1,443,817	+		Echvi_1257	0.72	-0.4
1,443,818	-		Echvi_1257	0.72	+0.1
1,443,819	+		Echvi_1257	0.73	+0.7
1,443,823	+		Echvi_1257	0.73	-0.7
1,443,823	+		Echvi_1257	0.73	-1.0
1,443,824	-		Echvi_1257	0.73	+0.4
1,443,824	-		Echvi_1257	0.73	+0.1
1,443,832	+		Echvi_1257	0.75	+0.1
1,443,859	-		Echvi_1257	0.79	+0.1