Experiment: a-Cyclodextrin (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0785 and Echvi_0786 are separated by 317 nucleotides
Echvi_0785: Echvi_0785 - Fatty acid desaturase., at 888,719 to 889,720
_0785
Echvi_0786: Echvi_0786 - hypothetical protein, at 890,038 to 891,483
_0786
Position (kb) 888
889
890 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 887.853 kb on + strand at 887.854 kb on - strand at 887.926 kb on + strand at 887.926 kb on + strand at 887.926 kb on + strand at 887.926 kb on + strand at 887.927 kb on - strand at 887.927 kb on - strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.928 kb on + strand at 887.929 kb on - strand at 887.929 kb on - strand at 887.963 kb on - strand at 887.981 kb on + strand at 887.981 kb on + strand at 887.981 kb on + strand at 887.982 kb on - strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.983 kb on + strand at 887.984 kb on - strand at 887.984 kb on - strand at 887.984 kb on - strand at 887.984 kb on - strand at 887.993 kb on + strand at 887.993 kb on + strand at 887.993 kb on + strand at 887.994 kb on - strand at 887.994 kb on - strand at 888.036 kb on - strand at 888.112 kb on + strand at 888.154 kb on - strand at 888.178 kb on - strand at 888.201 kb on + strand at 888.220 kb on + strand at 888.221 kb on - strand at 888.221 kb on - strand at 888.237 kb on + strand at 888.258 kb on - strand at 888.289 kb on - strand at 888.363 kb on - strand at 888.363 kb on - strand at 888.363 kb on - strand at 888.366 kb on + strand at 888.370 kb on - strand at 888.370 kb on - strand at 888.370 kb on - strand at 888.413 kb on - strand at 888.417 kb on - strand at 888.477 kb on - strand at 888.484 kb on - strand at 888.484 kb on - strand at 888.484 kb on - strand at 888.490 kb on + strand at 888.490 kb on + strand at 888.491 kb on - strand at 888.520 kb on + strand at 888.520 kb on + strand at 888.579 kb on + strand at 888.579 kb on + strand at 888.580 kb on - strand at 888.580 kb on - strand at 888.580 kb on - strand at 888.580 kb on - strand at 888.583 kb on + strand at 888.595 kb on + strand at 888.595 kb on + strand at 888.711 kb on - strand at 888.711 kb on - strand at 888.780 kb on + strand at 888.780 kb on + strand at 888.780 kb on + strand at 888.805 kb on - strand at 888.860 kb on + strand, within Echvi_0785 at 888.904 kb on + strand, within Echvi_0785 at 888.906 kb on + strand, within Echvi_0785 at 888.906 kb on + strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.907 kb on - strand, within Echvi_0785 at 888.952 kb on + strand, within Echvi_0785 at 888.959 kb on - strand, within Echvi_0785 at 889.075 kb on + strand, within Echvi_0785 at 889.075 kb on + strand, within Echvi_0785 at 889.075 kb on + strand, within Echvi_0785 at 889.078 kb on - strand, within Echvi_0785 at 889.139 kb on - strand, within Echvi_0785 at 889.181 kb on + strand, within Echvi_0785 at 889.181 kb on + strand, within Echvi_0785 at 889.182 kb on - strand, within Echvi_0785 at 889.182 kb on - strand, within Echvi_0785 at 889.210 kb on + strand, within Echvi_0785 at 889.210 kb on + strand, within Echvi_0785 at 889.211 kb on - strand, within Echvi_0785 at 889.211 kb on - strand, within Echvi_0785 at 889.211 kb on - strand, within Echvi_0785 at 889.212 kb on + strand, within Echvi_0785 at 889.212 kb on + strand, within Echvi_0785 at 889.212 kb on + strand, within Echvi_0785 at 889.213 kb on - strand, within Echvi_0785 at 889.213 kb on - strand, within Echvi_0785 at 889.216 kb on + strand, within Echvi_0785 at 889.217 kb on - strand, within Echvi_0785 at 889.217 kb on - strand, within Echvi_0785 at 889.263 kb on + strand, within Echvi_0785 at 889.264 kb on - strand, within Echvi_0785 at 889.264 kb on - strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.320 kb on + strand, within Echvi_0785 at 889.321 kb on - strand, within Echvi_0785 at 889.338 kb on - strand, within Echvi_0785 at 889.441 kb on + strand, within Echvi_0785 at 889.446 kb on + strand, within Echvi_0785 at 889.446 kb on + strand, within Echvi_0785 at 889.447 kb on - strand, within Echvi_0785 at 889.456 kb on - strand, within Echvi_0785 at 889.498 kb on + strand, within Echvi_0785 at 889.499 kb on - strand, within Echvi_0785 at 889.499 kb on - strand, within Echvi_0785 at 889.499 kb on - strand, within Echvi_0785 at 889.499 kb on - strand, within Echvi_0785 at 889.501 kb on + strand, within Echvi_0785 at 889.501 kb on + strand, within Echvi_0785 at 889.502 kb on - strand, within Echvi_0785 at 889.502 kb on - strand, within Echvi_0785 at 889.577 kb on - strand, within Echvi_0785 at 889.654 kb on + strand at 889.670 kb on + strand at 889.671 kb on - strand at 889.695 kb on + strand at 889.724 kb on - strand at 889.724 kb on - strand at 889.727 kb on + strand at 889.727 kb on + strand at 889.728 kb on - strand at 889.729 kb on + strand at 889.730 kb on - strand at 889.777 kb on + strand at 889.809 kb on + strand at 889.809 kb on + strand at 889.810 kb on - strand at 889.814 kb on - strand at 889.822 kb on + strand at 889.874 kb on + strand at 889.878 kb on + strand at 889.878 kb on + strand at 889.879 kb on - strand at 889.879 kb on - strand at 889.879 kb on - strand at 889.955 kb on - strand at 889.963 kb on + strand at 890.011 kb on - strand at 890.029 kb on - strand at 890.030 kb on + strand at 890.030 kb on + strand at 890.030 kb on + strand at 890.030 kb on + strand at 890.039 kb on + strand at 890.044 kb on + strand at 890.068 kb on + strand at 890.068 kb on + strand at 890.103 kb on + strand at 890.104 kb on - strand at 890.105 kb on + strand at 890.109 kb on + strand at 890.110 kb on - strand at 890.110 kb on - strand at 890.141 kb on + strand at 890.141 kb on + strand at 890.176 kb on - strand at 890.181 kb on - strand at 890.196 kb on + strand, within Echvi_0786 at 890.235 kb on - strand, within Echvi_0786 at 890.235 kb on - strand, within Echvi_0786 at 890.241 kb on + strand, within Echvi_0786 at 890.246 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.306 kb on + strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.307 kb on - strand, within Echvi_0786 at 890.331 kb on - strand, within Echvi_0786 at 890.331 kb on - strand, within Echvi_0786 at 890.369 kb on - strand, within Echvi_0786 at 890.495 kb on + strand, within Echvi_0786 at 890.495 kb on + strand, within Echvi_0786 at 890.506 kb on - strand, within Echvi_0786 at 890.561 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.594 kb on + strand, within Echvi_0786 at 890.595 kb on - strand, within Echvi_0786 at 890.616 kb on - strand, within Echvi_0786 at 890.616 kb on - strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.618 kb on + strand, within Echvi_0786 at 890.619 kb on - strand, within Echvi_0786 at 890.619 kb on - strand, within Echvi_0786 at 890.653 kb on - strand, within Echvi_0786 at 890.664 kb on + strand, within Echvi_0786 at 890.681 kb on + strand, within Echvi_0786 at 890.682 kb on - strand, within Echvi_0786 at 890.682 kb on - strand, within Echvi_0786 at 890.682 kb on - strand, within Echvi_0786
Per-strain Table
Position Strand Gene LocusTag Fraction a-Cyclodextrin (C) remove 887,853 + -2.4 887,854 - +2.3 887,926 + +1.7 887,926 + -0.9 887,926 + +0.6 887,926 + +1.2 887,927 - +0.4 887,927 - -0.2 887,928 + -0.2 887,928 + -0.4 887,928 + -0.4 887,928 + +1.0 887,928 + +0.4 887,929 - -0.2 887,929 - +0.6 887,963 - -1.5 887,981 + -0.4 887,981 + -0.3 887,981 + +0.9 887,982 - -0.4 887,983 + +0.5 887,983 + +0.6 887,983 + -0.5 887,983 + -1.2 887,983 + +0.5 887,983 + +0.4 887,983 + -0.1 887,984 - -0.1 887,984 - -0.3 887,984 - -0.6 887,984 - +0.3 887,993 + -0.3 887,993 + +0.6 887,993 + +0.8 887,994 - +0.9 887,994 - -0.3 888,036 - +0.8 888,112 + +0.4 888,154 - +1.1 888,178 - +0.4 888,201 + -1.9 888,220 + -0.6 888,221 - -0.5 888,221 - +0.0 888,237 + -1.0 888,258 - -0.6 888,289 - +2.4 888,363 - +0.8 888,363 - -0.1 888,363 - -0.2 888,366 + +0.7 888,370 - +1.0 888,370 - +0.3 888,370 - +0.7 888,413 - +0.4 888,417 - +2.6 888,477 - +1.4 888,484 - +0.4 888,484 - -1.3 888,484 - +0.1 888,490 + +1.0 888,490 + +0.5 888,491 - +1.7 888,520 + +1.0 888,520 + +1.2 888,579 + +0.6 888,579 + +0.3 888,580 - +1.3 888,580 - -0.3 888,580 - +0.4 888,580 - +0.8 888,583 + +0.0 888,595 + -2.3 888,595 + -0.3 888,711 - -0.6 888,711 - -0.5 888,780 + -3.1 888,780 + -1.5 888,780 + -3.6 888,805 - -2.6 888,860 + Echvi_0785 0.14 -0.1 888,904 + Echvi_0785 0.18 -3.8 888,906 + Echvi_0785 0.19 -2.4 888,906 + Echvi_0785 0.19 -1.6 888,907 - Echvi_0785 0.19 -2.8 888,907 - Echvi_0785 0.19 -3.0 888,907 - Echvi_0785 0.19 +0.9 888,907 - Echvi_0785 0.19 -1.6 888,907 - Echvi_0785 0.19 -2.7 888,952 + Echvi_0785 0.23 -3.8 888,959 - Echvi_0785 0.24 -3.6 889,075 + Echvi_0785 0.36 +0.3 889,075 + Echvi_0785 0.36 +1.9 889,075 + Echvi_0785 0.36 -1.9 889,078 - Echvi_0785 0.36 -2.0 889,139 - Echvi_0785 0.42 -1.3 889,181 + Echvi_0785 0.46 -1.9 889,181 + Echvi_0785 0.46 -2.5 889,182 - Echvi_0785 0.46 -3.1 889,182 - Echvi_0785 0.46 -1.1 889,210 + Echvi_0785 0.49 -2.6 889,210 + Echvi_0785 0.49 -3.7 889,211 - Echvi_0785 0.49 -2.5 889,211 - Echvi_0785 0.49 -0.4 889,211 - Echvi_0785 0.49 -0.5 889,212 + Echvi_0785 0.49 -2.4 889,212 + Echvi_0785 0.49 -1.8 889,212 + Echvi_0785 0.49 -3.8 889,213 - Echvi_0785 0.49 -3.3 889,213 - Echvi_0785 0.49 -2.2 889,216 + Echvi_0785 0.50 -1.9 889,217 - Echvi_0785 0.50 -3.5 889,217 - Echvi_0785 0.50 +0.5 889,263 + Echvi_0785 0.54 -1.9 889,264 - Echvi_0785 0.54 -2.9 889,264 - Echvi_0785 0.54 -2.8 889,320 + Echvi_0785 0.60 -1.8 889,320 + Echvi_0785 0.60 +0.4 889,320 + Echvi_0785 0.60 -2.7 889,320 + Echvi_0785 0.60 -3.4 889,320 + Echvi_0785 0.60 -1.1 889,320 + Echvi_0785 0.60 -0.5 889,320 + Echvi_0785 0.60 -0.9 889,320 + Echvi_0785 0.60 -2.5 889,321 - Echvi_0785 0.60 -3.0 889,338 - Echvi_0785 0.62 -1.9 889,441 + Echvi_0785 0.72 -0.3 889,446 + Echvi_0785 0.73 -0.7 889,446 + Echvi_0785 0.73 -2.6 889,447 - Echvi_0785 0.73 -0.9 889,456 - Echvi_0785 0.74 -0.7 889,498 + Echvi_0785 0.78 -3.0 889,499 - Echvi_0785 0.78 -1.1 889,499 - Echvi_0785 0.78 -2.7 889,499 - Echvi_0785 0.78 -0.9 889,499 - Echvi_0785 0.78 -2.9 889,501 + Echvi_0785 0.78 +1.9 889,501 + Echvi_0785 0.78 -2.3 889,502 - Echvi_0785 0.78 -0.5 889,502 - Echvi_0785 0.78 -2.9 889,577 - Echvi_0785 0.86 -0.9 889,654 + -0.6 889,670 + -1.7 889,671 - -1.9 889,695 + -4.7 889,724 - -0.9 889,724 - -0.6 889,727 + +0.3 889,727 + -3.0 889,728 - -0.4 889,729 + -0.5 889,730 - +0.3 889,777 + -2.2 889,809 + -3.9 889,809 + -1.2 889,810 - +0.1 889,814 - +0.3 889,822 + -3.0 889,874 + -1.7 889,878 + +1.1 889,878 + +0.7 889,879 - -0.4 889,879 - -0.6 889,879 - -0.0 889,955 - -1.1 889,963 + +0.4 890,011 - -0.0 890,029 - -0.5 890,030 + +0.7 890,030 + -3.1 890,030 + -1.1 890,030 + +0.7 890,039 + +1.1 890,044 + -0.5 890,068 + -0.1 890,068 + +0.8 890,103 + +1.4 890,104 - +0.6 890,105 + -1.5 890,109 + +0.3 890,110 - +1.6 890,110 - -0.8 890,141 + -0.4 890,141 + -0.7 890,176 - +1.1 890,181 - +0.2 890,196 + Echvi_0786 0.11 -0.5 890,235 - Echvi_0786 0.14 +0.1 890,235 - Echvi_0786 0.14 -1.7 890,241 + Echvi_0786 0.14 +0.5 890,246 + Echvi_0786 0.14 -0.8 890,306 + Echvi_0786 0.19 +0.1 890,306 + Echvi_0786 0.19 -2.5 890,306 + Echvi_0786 0.19 -1.5 890,306 + Echvi_0786 0.19 +0.0 890,306 + Echvi_0786 0.19 -1.9 890,306 + Echvi_0786 0.19 +0.5 890,306 + Echvi_0786 0.19 -0.2 890,306 + Echvi_0786 0.19 +0.6 890,306 + Echvi_0786 0.19 +0.3 890,307 - Echvi_0786 0.19 +0.0 890,307 - Echvi_0786 0.19 -0.0 890,307 - Echvi_0786 0.19 +0.5 890,307 - Echvi_0786 0.19 +0.7 890,307 - Echvi_0786 0.19 +1.9 890,307 - Echvi_0786 0.19 +0.3 890,307 - Echvi_0786 0.19 +1.1 890,307 - Echvi_0786 0.19 -0.5 890,307 - Echvi_0786 0.19 +1.1 890,331 - Echvi_0786 0.20 -0.4 890,331 - Echvi_0786 0.20 -1.3 890,369 - Echvi_0786 0.23 +2.2 890,495 + Echvi_0786 0.32 +0.6 890,495 + Echvi_0786 0.32 +1.0 890,506 - Echvi_0786 0.32 -0.7 890,561 + Echvi_0786 0.36 -0.6 890,594 + Echvi_0786 0.38 -0.3 890,594 + Echvi_0786 0.38 -0.2 890,594 + Echvi_0786 0.38 -1.3 890,594 + Echvi_0786 0.38 +1.6 890,594 + Echvi_0786 0.38 +0.3 890,594 + Echvi_0786 0.38 +0.0 890,594 + Echvi_0786 0.38 -0.8 890,595 - Echvi_0786 0.39 -0.5 890,616 - Echvi_0786 0.40 +1.0 890,616 - Echvi_0786 0.40 +0.2 890,618 + Echvi_0786 0.40 -0.3 890,618 + Echvi_0786 0.40 +0.1 890,618 + Echvi_0786 0.40 +1.0 890,618 + Echvi_0786 0.40 -0.2 890,618 + Echvi_0786 0.40 +0.7 890,618 + Echvi_0786 0.40 -0.3 890,618 + Echvi_0786 0.40 +1.9 890,618 + Echvi_0786 0.40 +1.0 890,618 + Echvi_0786 0.40 +0.1 890,619 - Echvi_0786 0.40 -0.8 890,619 - Echvi_0786 0.40 -0.8 890,653 - Echvi_0786 0.43 +0.5 890,664 + Echvi_0786 0.43 -0.6 890,681 + Echvi_0786 0.44 +1.1 890,682 - Echvi_0786 0.45 +0.2 890,682 - Echvi_0786 0.45 -0.6 890,682 - Echvi_0786 0.45 +0.1
Or see this region's nucleotide sequence