Strain Fitness in Escherichia coli BL21 around ECD_04233

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04232 and ECD_04233 are separated by 48 nucleotides ECD_04232: ECD_04232 - methyl-accepting chemotaxis protein I, serine sensor receptor, at 4,510,033 to 4,511,688 _04232 ECD_04233: ECD_04233 - putative L-galactonate:H+ symporter, at 4,511,737 to 4,513,098 _04233 Position (kb) 4511 4512 4513 4514Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4510.806 kb on + strand, within ECD_04232at 4510.864 kb on + strand, within ECD_04232at 4510.864 kb on + strand, within ECD_04232at 4510.864 kb on + strand, within ECD_04232at 4510.864 kb on + strand, within ECD_04232at 4510.864 kb on + strand, within ECD_04232at 4510.864 kb on + strand, within ECD_04232at 4511.122 kb on - strand, within ECD_04232at 4511.125 kb on - strand, within ECD_04232at 4511.284 kb on - strand, within ECD_04232at 4511.398 kb on - strand, within ECD_04232at 4511.687 kb on - strandat 4511.730 kb on - strandat 4511.784 kb on - strandat 4511.784 kb on - strandat 4511.784 kb on - strandat 4511.859 kb on + strandat 4511.859 kb on + strandat 4511.860 kb on - strandat 4512.056 kb on - strand, within ECD_04233at 4512.056 kb on - strand, within ECD_04233at 4512.056 kb on - strand, within ECD_04233at 4512.105 kb on + strand, within ECD_04233at 4512.155 kb on + strand, within ECD_04233at 4512.235 kb on - strand, within ECD_04233at 4512.236 kb on + strand, within ECD_04233at 4512.236 kb on + strand, within ECD_04233at 4512.287 kb on + strand, within ECD_04233at 4512.288 kb on - strand, within ECD_04233at 4512.391 kb on - strand, within ECD_04233at 4512.405 kb on - strand, within ECD_04233at 4512.431 kb on - strand, within ECD_04233at 4512.431 kb on - strand, within ECD_04233at 4512.431 kb on - strand, within ECD_04233at 4512.456 kb on + strand, within ECD_04233at 4512.456 kb on + strand, within ECD_04233at 4512.456 kb on + strand, within ECD_04233at 4512.456 kb on + strand, within ECD_04233at 4512.457 kb on - strand, within ECD_04233at 4512.457 kb on - strand, within ECD_04233at 4512.457 kb on - strand, within ECD_04233at 4512.457 kb on - strand, within ECD_04233at 4512.458 kb on + strand, within ECD_04233at 4512.458 kb on + strand, within ECD_04233at 4512.458 kb on + strand, within ECD_04233at 4512.458 kb on + strand, within ECD_04233at 4512.459 kb on - strand, within ECD_04233at 4512.459 kb on - strand, within ECD_04233at 4512.488 kb on - strand, within ECD_04233at 4512.499 kb on - strand, within ECD_04233at 4512.501 kb on + strand, within ECD_04233at 4512.501 kb on + strand, within ECD_04233at 4512.502 kb on - strand, within ECD_04233at 4512.502 kb on - strand, within ECD_04233at 4512.573 kb on + strand, within ECD_04233at 4512.574 kb on - strand, within ECD_04233at 4512.709 kb on - strand, within ECD_04233at 4513.441 kb on + strandat 4513.853 kb on + strandat 4513.987 kb on - strandat 4513.989 kb on + strandat 4514.033 kb on + strandat 4514.033 kb on + strandat 4514.034 kb on - strandat 4514.034 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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4,510,806 + ECD_04232 0.47 -1.4
4,510,864 + ECD_04232 0.50 +1.4
4,510,864 + ECD_04232 0.50 +0.7
4,510,864 + ECD_04232 0.50 +1.0
4,510,864 + ECD_04232 0.50 -1.0
4,510,864 + ECD_04232 0.50 +1.0
4,510,864 + ECD_04232 0.50 +0.6
4,511,122 - ECD_04232 0.66 -0.3
4,511,125 - ECD_04232 0.66 -1.5
4,511,284 - ECD_04232 0.76 -0.3
4,511,398 - ECD_04232 0.82 -0.7
4,511,687 - -2.5
4,511,730 - -2.9
4,511,784 - +1.4
4,511,784 - +0.3
4,511,784 - +0.3
4,511,859 + -1.1
4,511,859 + +0.9
4,511,860 - -1.4
4,512,056 - ECD_04233 0.23 -0.6
4,512,056 - ECD_04233 0.23 +0.9
4,512,056 - ECD_04233 0.23 +0.0
4,512,105 + ECD_04233 0.27 -2.4
4,512,155 + ECD_04233 0.31 -0.3
4,512,235 - ECD_04233 0.37 +0.8
4,512,236 + ECD_04233 0.37 -1.9
4,512,236 + ECD_04233 0.37 +0.5
4,512,287 + ECD_04233 0.40 +0.2
4,512,288 - ECD_04233 0.40 -2.9
4,512,391 - ECD_04233 0.48 -2.8
4,512,405 - ECD_04233 0.49 -0.1
4,512,431 - ECD_04233 0.51 -1.6
4,512,431 - ECD_04233 0.51 -0.7
4,512,431 - ECD_04233 0.51 +0.3
4,512,456 + ECD_04233 0.53 -1.4
4,512,456 + ECD_04233 0.53 +0.5
4,512,456 + ECD_04233 0.53 -1.1
4,512,456 + ECD_04233 0.53 -0.5
4,512,457 - ECD_04233 0.53 +0.3
4,512,457 - ECD_04233 0.53 +2.6
4,512,457 - ECD_04233 0.53 -0.4
4,512,457 - ECD_04233 0.53 +0.4
4,512,458 + ECD_04233 0.53 +0.1
4,512,458 + ECD_04233 0.53 -1.4
4,512,458 + ECD_04233 0.53 +0.8
4,512,458 + ECD_04233 0.53 -2.6
4,512,459 - ECD_04233 0.53 +1.1
4,512,459 - ECD_04233 0.53 -1.2
4,512,488 - ECD_04233 0.55 -0.2
4,512,499 - ECD_04233 0.56 +0.5
4,512,501 + ECD_04233 0.56 +0.4
4,512,501 + ECD_04233 0.56 -1.4
4,512,502 - ECD_04233 0.56 +1.2
4,512,502 - ECD_04233 0.56 -0.8
4,512,573 + ECD_04233 0.61 -1.6
4,512,574 - ECD_04233 0.61 -0.8
4,512,709 - ECD_04233 0.71 -0.1
4,513,441 + -1.2
4,513,853 + -0.1
4,513,987 - -0.4
4,513,989 + +0.1
4,514,033 + -0.3
4,514,033 + -0.5
4,514,034 - -0.8
4,514,034 - -1.4

Or see this region's nucleotide sequence