Strain Fitness in Escherichia coli BL21 around ECD_04075

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04073 and ECD_04074 are separated by 9 nucleotidesECD_04074 and ECD_04075 are separated by 9 nucleotidesECD_04075 and ECD_04076 are separated by 9 nucleotides ECD_04073: ECD_04073 - putative acetyl-CoA:acetoacetyl-CoA transferase, at 4,336,618 to 4,338,159 _04073 ECD_04074: ECD_04074 - hypothetical protein, at 4,338,169 to 4,338,945 _04074 ECD_04075: ECD_04075 - hypothetical protein, at 4,338,955 to 4,339,797 _04075 ECD_04076: ECD_04076 - putative oxoacyl reductase, at 4,339,807 to 4,340,598 _04076 Position (kb) 4338 4339 4340Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4337.955 kb on + strand, within ECD_04073at 4338.057 kb on + strandat 4338.057 kb on + strandat 4338.097 kb on - strandat 4338.097 kb on - strandat 4338.154 kb on - strandat 4338.285 kb on + strand, within ECD_04074at 4338.286 kb on - strand, within ECD_04074at 4338.312 kb on + strand, within ECD_04074at 4338.312 kb on + strand, within ECD_04074at 4338.313 kb on - strand, within ECD_04074at 4338.313 kb on - strand, within ECD_04074at 4338.313 kb on - strand, within ECD_04074at 4338.409 kb on + strand, within ECD_04074at 4338.577 kb on - strand, within ECD_04074at 4338.607 kb on - strand, within ECD_04074at 4338.711 kb on + strand, within ECD_04074at 4338.742 kb on - strand, within ECD_04074at 4338.876 kb on + strandat 4338.877 kb on - strandat 4339.048 kb on - strand, within ECD_04075at 4339.154 kb on - strand, within ECD_04075at 4339.313 kb on - strand, within ECD_04075at 4339.424 kb on - strand, within ECD_04075at 4339.485 kb on + strand, within ECD_04075at 4339.485 kb on + strand, within ECD_04075at 4339.486 kb on - strand, within ECD_04075at 4339.486 kb on - strand, within ECD_04075at 4339.487 kb on + strand, within ECD_04075at 4339.487 kb on + strand, within ECD_04075at 4339.487 kb on + strand, within ECD_04075at 4339.487 kb on + strand, within ECD_04075at 4339.487 kb on + strand, within ECD_04075at 4339.487 kb on + strand, within ECD_04075at 4339.488 kb on - strand, within ECD_04075at 4339.577 kb on + strand, within ECD_04075at 4339.578 kb on - strand, within ECD_04075at 4339.580 kb on + strand, within ECD_04075at 4339.581 kb on - strand, within ECD_04075at 4339.581 kb on - strand, within ECD_04075at 4339.761 kb on + strandat 4339.762 kb on - strandat 4339.825 kb on + strandat 4339.965 kb on - strand, within ECD_04076at 4339.967 kb on + strand, within ECD_04076at 4340.040 kb on + strand, within ECD_04076at 4340.040 kb on + strand, within ECD_04076at 4340.041 kb on - strand, within ECD_04076at 4340.099 kb on + strand, within ECD_04076at 4340.152 kb on - strand, within ECD_04076at 4340.244 kb on + strand, within ECD_04076at 4340.437 kb on + strand, within ECD_04076at 4340.599 kb on - strandat 4340.604 kb on - strandat 4340.604 kb on - strandat 4340.621 kb on + strandat 4340.779 kb on + strandat 4340.779 kb on + strandat 4340.780 kb on - strandat 4340.783 kb on + strandat 4340.783 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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4,337,955 + ECD_04073 0.87 -1.8
4,338,057 + -0.7
4,338,057 + -2.0
4,338,097 - +1.6
4,338,097 - -0.2
4,338,154 - -1.2
4,338,285 + ECD_04074 0.15 -1.0
4,338,286 - ECD_04074 0.15 -0.2
4,338,312 + ECD_04074 0.18 -3.4
4,338,312 + ECD_04074 0.18 -0.9
4,338,313 - ECD_04074 0.19 +0.4
4,338,313 - ECD_04074 0.19 +0.6
4,338,313 - ECD_04074 0.19 +1.1
4,338,409 + ECD_04074 0.31 -0.3
4,338,577 - ECD_04074 0.53 -0.7
4,338,607 - ECD_04074 0.56 -2.9
4,338,711 + ECD_04074 0.70 -1.9
4,338,742 - ECD_04074 0.74 +0.1
4,338,876 + -0.7
4,338,877 - +0.1
4,339,048 - ECD_04075 0.11 +0.6
4,339,154 - ECD_04075 0.24 -0.4
4,339,313 - ECD_04075 0.42 +0.7
4,339,424 - ECD_04075 0.56 -1.4
4,339,485 + ECD_04075 0.63 -2.6
4,339,485 + ECD_04075 0.63 -1.4
4,339,486 - ECD_04075 0.63 +0.6
4,339,486 - ECD_04075 0.63 -0.5
4,339,487 + ECD_04075 0.63 -0.8
4,339,487 + ECD_04075 0.63 -1.4
4,339,487 + ECD_04075 0.63 +0.1
4,339,487 + ECD_04075 0.63 -0.8
4,339,487 + ECD_04075 0.63 +0.4
4,339,487 + ECD_04075 0.63 -0.5
4,339,488 - ECD_04075 0.63 +1.0
4,339,577 + ECD_04075 0.74 +1.4
4,339,578 - ECD_04075 0.74 +1.9
4,339,580 + ECD_04075 0.74 +0.9
4,339,581 - ECD_04075 0.74 +1.1
4,339,581 - ECD_04075 0.74 +2.7
4,339,761 + -0.0
4,339,762 - -2.1
4,339,825 + -1.1
4,339,965 - ECD_04076 0.20 +0.2
4,339,967 + ECD_04076 0.20 -0.0
4,340,040 + ECD_04076 0.29 +0.4
4,340,040 + ECD_04076 0.29 +1.0
4,340,041 - ECD_04076 0.30 +0.2
4,340,099 + ECD_04076 0.37 -1.1
4,340,152 - ECD_04076 0.44 +0.6
4,340,244 + ECD_04076 0.55 -1.2
4,340,437 + ECD_04076 0.80 -1.7
4,340,599 - -1.7
4,340,604 - -0.6
4,340,604 - -3.0
4,340,621 + +0.2
4,340,779 + -1.9
4,340,779 + -0.5
4,340,780 - -0.0
4,340,783 + -0.3
4,340,783 + -0.2

Or see this region's nucleotide sequence