Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04071 and ECD_04072 are separated by 92 nucleotides ECD_04072 and ECD_04073 overlap by 4 nucleotides
ECD_04071: ECD_04071 - Hexuronate transporter, at 4,333,179 to 4,334,456
_04071
ECD_04072: ECD_04072 - putative oxidoreductase, at 4,334,549 to 4,336,621
_04072
ECD_04073: ECD_04073 - putative acetyl-CoA:acetoacetyl-CoA transferase, at 4,336,618 to 4,338,159
_04073
Position (kb)
4334
4335
4336
4337 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4333.677 kb on - strand, within ECD_04071 at 4333.817 kb on + strand, within ECD_04071 at 4333.855 kb on + strand, within ECD_04071 at 4333.973 kb on + strand, within ECD_04071 at 4334.036 kb on + strand, within ECD_04071 at 4334.148 kb on - strand, within ECD_04071 at 4334.283 kb on - strand, within ECD_04071 at 4334.367 kb on - strand at 4334.371 kb on - strand at 4334.371 kb on - strand at 4334.371 kb on - strand at 4334.413 kb on - strand at 4334.776 kb on + strand, within ECD_04072 at 4334.780 kb on + strand, within ECD_04072 at 4334.781 kb on - strand, within ECD_04072 at 4334.815 kb on + strand, within ECD_04072 at 4334.815 kb on + strand, within ECD_04072 at 4334.817 kb on + strand, within ECD_04072 at 4334.817 kb on + strand, within ECD_04072 at 4334.817 kb on + strand, within ECD_04072 at 4334.817 kb on + strand, within ECD_04072 at 4334.817 kb on + strand, within ECD_04072 at 4334.817 kb on + strand, within ECD_04072 at 4334.818 kb on - strand, within ECD_04072 at 4334.872 kb on + strand, within ECD_04072 at 4334.872 kb on + strand, within ECD_04072 at 4335.073 kb on + strand, within ECD_04072 at 4335.086 kb on + strand, within ECD_04072 at 4335.088 kb on + strand, within ECD_04072 at 4335.089 kb on - strand, within ECD_04072 at 4335.119 kb on + strand, within ECD_04072 at 4335.120 kb on - strand, within ECD_04072 at 4335.121 kb on + strand, within ECD_04072 at 4335.122 kb on - strand, within ECD_04072 at 4335.133 kb on + strand, within ECD_04072 at 4335.311 kb on - strand, within ECD_04072 at 4335.320 kb on - strand, within ECD_04072 at 4335.320 kb on - strand, within ECD_04072 at 4335.370 kb on + strand, within ECD_04072 at 4335.382 kb on + strand, within ECD_04072 at 4335.382 kb on + strand, within ECD_04072 at 4335.383 kb on - strand, within ECD_04072 at 4335.450 kb on + strand, within ECD_04072 at 4335.537 kb on - strand, within ECD_04072 at 4335.574 kb on + strand, within ECD_04072 at 4335.575 kb on - strand, within ECD_04072 at 4335.575 kb on - strand, within ECD_04072 at 4335.695 kb on - strand, within ECD_04072 at 4335.696 kb on + strand, within ECD_04072 at 4335.723 kb on + strand, within ECD_04072 at 4335.727 kb on + strand, within ECD_04072 at 4335.727 kb on + strand, within ECD_04072 at 4335.728 kb on - strand, within ECD_04072 at 4335.728 kb on - strand, within ECD_04072 at 4335.729 kb on + strand, within ECD_04072 at 4335.730 kb on - strand, within ECD_04072 at 4335.730 kb on - strand, within ECD_04072 at 4335.730 kb on - strand, within ECD_04072 at 4335.743 kb on + strand, within ECD_04072 at 4335.743 kb on + strand, within ECD_04072 at 4335.743 kb on + strand, within ECD_04072 at 4335.743 kb on + strand, within ECD_04072 at 4335.744 kb on - strand, within ECD_04072 at 4335.747 kb on + strand, within ECD_04072 at 4335.747 kb on + strand, within ECD_04072 at 4335.747 kb on + strand, within ECD_04072 at 4335.747 kb on + strand, within ECD_04072 at 4335.747 kb on + strand, within ECD_04072 at 4335.747 kb on + strand, within ECD_04072 at 4335.748 kb on - strand, within ECD_04072 at 4335.748 kb on - strand, within ECD_04072 at 4335.748 kb on - strand, within ECD_04072 at 4335.791 kb on + strand, within ECD_04072 at 4335.921 kb on - strand, within ECD_04072 at 4336.039 kb on + strand, within ECD_04072 at 4336.218 kb on + strand, within ECD_04072 at 4336.218 kb on + strand, within ECD_04072 at 4336.219 kb on - strand, within ECD_04072 at 4336.251 kb on - strand, within ECD_04072 at 4336.264 kb on - strand, within ECD_04072 at 4336.264 kb on - strand, within ECD_04072 at 4336.396 kb on + strand, within ECD_04072 at 4336.396 kb on + strand, within ECD_04072 at 4336.396 kb on + strand, within ECD_04072 at 4336.397 kb on - strand, within ECD_04072 at 4336.397 kb on - strand, within ECD_04072 at 4336.398 kb on + strand, within ECD_04072 at 4336.398 kb on + strand, within ECD_04072 at 4336.398 kb on + strand, within ECD_04072 at 4336.398 kb on + strand, within ECD_04072 at 4336.398 kb on + strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.399 kb on - strand, within ECD_04072 at 4336.400 kb on + strand, within ECD_04072 at 4336.401 kb on - strand, within ECD_04072 at 4336.401 kb on - strand, within ECD_04072 at 4336.401 kb on - strand, within ECD_04072 at 4336.484 kb on + strand at 4336.485 kb on - strand at 4336.513 kb on - strand at 4336.576 kb on + strand at 4336.576 kb on + strand at 4336.576 kb on + strand at 4336.577 kb on - strand at 4336.647 kb on + strand at 4336.675 kb on - strand at 4336.694 kb on + strand at 4336.694 kb on + strand at 4336.695 kb on - strand at 4336.791 kb on - strand, within ECD_04073 at 4336.791 kb on - strand, within ECD_04073 at 4336.887 kb on + strand, within ECD_04073 at 4336.906 kb on + strand, within ECD_04073 at 4336.957 kb on - strand, within ECD_04073 at 4337.090 kb on + strand, within ECD_04073 at 4337.090 kb on + strand, within ECD_04073 at 4337.091 kb on - strand, within ECD_04073 at 4337.091 kb on - strand, within ECD_04073 at 4337.091 kb on - strand, within ECD_04073 at 4337.175 kb on + strand, within ECD_04073 at 4337.175 kb on + strand, within ECD_04073 at 4337.176 kb on - strand, within ECD_04073 at 4337.179 kb on + strand, within ECD_04073 at 4337.179 kb on + strand, within ECD_04073 at 4337.180 kb on - strand, within ECD_04073 at 4337.180 kb on - strand, within ECD_04073 at 4337.361 kb on + strand, within ECD_04073 at 4337.522 kb on - strand, within ECD_04073 at 4337.567 kb on + strand, within ECD_04073 at 4337.567 kb on + strand, within ECD_04073 at 4337.568 kb on - strand, within ECD_04073 at 4337.568 kb on - strand, within ECD_04073 at 4337.571 kb on + strand, within ECD_04073
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 4,333,677 - ECD_04071 0.39 +0.8 4,333,817 + ECD_04071 0.50 -1.0 4,333,855 + ECD_04071 0.53 -0.2 4,333,973 + ECD_04071 0.62 -0.0 4,334,036 + ECD_04071 0.67 -2.2 4,334,148 - ECD_04071 0.76 +0.8 4,334,283 - ECD_04071 0.86 -2.5 4,334,367 - +0.4 4,334,371 - -1.3 4,334,371 - +0.6 4,334,371 - +0.8 4,334,413 - -0.9 4,334,776 + ECD_04072 0.11 +0.3 4,334,780 + ECD_04072 0.11 -0.0 4,334,781 - ECD_04072 0.11 +0.3 4,334,815 + ECD_04072 0.13 -0.1 4,334,815 + ECD_04072 0.13 -0.6 4,334,817 + ECD_04072 0.13 -0.2 4,334,817 + ECD_04072 0.13 +1.1 4,334,817 + ECD_04072 0.13 +1.0 4,334,817 + ECD_04072 0.13 -0.9 4,334,817 + ECD_04072 0.13 -2.8 4,334,817 + ECD_04072 0.13 -0.1 4,334,818 - ECD_04072 0.13 +0.6 4,334,872 + ECD_04072 0.16 +0.3 4,334,872 + ECD_04072 0.16 -1.4 4,335,073 + ECD_04072 0.25 -1.4 4,335,086 + ECD_04072 0.26 -0.3 4,335,088 + ECD_04072 0.26 -0.4 4,335,089 - ECD_04072 0.26 -0.9 4,335,119 + ECD_04072 0.27 -0.6 4,335,120 - ECD_04072 0.28 -0.5 4,335,121 + ECD_04072 0.28 -1.4 4,335,122 - ECD_04072 0.28 -1.5 4,335,133 + ECD_04072 0.28 -0.7 4,335,311 - ECD_04072 0.37 +2.5 4,335,320 - ECD_04072 0.37 -1.6 4,335,320 - ECD_04072 0.37 -1.3 4,335,370 + ECD_04072 0.40 -0.5 4,335,382 + ECD_04072 0.40 +0.6 4,335,382 + ECD_04072 0.40 -1.0 4,335,383 - ECD_04072 0.40 -0.2 4,335,450 + ECD_04072 0.43 -0.1 4,335,537 - ECD_04072 0.48 -0.8 4,335,574 + ECD_04072 0.49 -2.1 4,335,575 - ECD_04072 0.49 -0.4 4,335,575 - ECD_04072 0.49 -0.9 4,335,695 - ECD_04072 0.55 +0.9 4,335,696 + ECD_04072 0.55 -1.7 4,335,723 + ECD_04072 0.57 +0.6 4,335,727 + ECD_04072 0.57 +1.1 4,335,727 + ECD_04072 0.57 -0.6 4,335,728 - ECD_04072 0.57 -0.2 4,335,728 - ECD_04072 0.57 -1.1 4,335,729 + ECD_04072 0.57 +0.1 4,335,730 - ECD_04072 0.57 -2.9 4,335,730 - ECD_04072 0.57 -1.0 4,335,730 - ECD_04072 0.57 +0.2 4,335,743 + ECD_04072 0.58 -1.8 4,335,743 + ECD_04072 0.58 -1.4 4,335,743 + ECD_04072 0.58 +0.3 4,335,743 + ECD_04072 0.58 -3.1 4,335,744 - ECD_04072 0.58 -1.3 4,335,747 + ECD_04072 0.58 +0.9 4,335,747 + ECD_04072 0.58 -1.0 4,335,747 + ECD_04072 0.58 +1.4 4,335,747 + ECD_04072 0.58 -0.4 4,335,747 + ECD_04072 0.58 +1.1 4,335,747 + ECD_04072 0.58 -2.5 4,335,748 - ECD_04072 0.58 +0.7 4,335,748 - ECD_04072 0.58 +0.2 4,335,748 - ECD_04072 0.58 -0.4 4,335,791 + ECD_04072 0.60 -1.3 4,335,921 - ECD_04072 0.66 +0.3 4,336,039 + ECD_04072 0.72 -1.4 4,336,218 + ECD_04072 0.81 -2.4 4,336,218 + ECD_04072 0.81 -0.4 4,336,219 - ECD_04072 0.81 -0.5 4,336,251 - ECD_04072 0.82 +0.1 4,336,264 - ECD_04072 0.83 -0.4 4,336,264 - ECD_04072 0.83 -0.6 4,336,396 + ECD_04072 0.89 +0.1 4,336,396 + ECD_04072 0.89 -1.2 4,336,396 + ECD_04072 0.89 +0.3 4,336,397 - ECD_04072 0.89 +0.9 4,336,397 - ECD_04072 0.89 -1.4 4,336,398 + ECD_04072 0.89 +0.3 4,336,398 + ECD_04072 0.89 -0.4 4,336,398 + ECD_04072 0.89 -1.6 4,336,398 + ECD_04072 0.89 +0.3 4,336,398 + ECD_04072 0.89 -0.1 4,336,399 - ECD_04072 0.89 +3.9 4,336,399 - ECD_04072 0.89 +0.8 4,336,399 - ECD_04072 0.89 -1.3 4,336,399 - ECD_04072 0.89 -0.4 4,336,399 - ECD_04072 0.89 +0.5 4,336,399 - ECD_04072 0.89 -1.9 4,336,399 - ECD_04072 0.89 -0.2 4,336,399 - ECD_04072 0.89 -3.5 4,336,399 - ECD_04072 0.89 +0.5 4,336,399 - ECD_04072 0.89 +1.2 4,336,399 - ECD_04072 0.89 -0.2 4,336,399 - ECD_04072 0.89 -0.5 4,336,400 + ECD_04072 0.89 -3.2 4,336,401 - ECD_04072 0.89 -1.3 4,336,401 - ECD_04072 0.89 +0.2 4,336,401 - ECD_04072 0.89 +1.4 4,336,484 + -0.4 4,336,485 - -0.6 4,336,513 - +0.1 4,336,576 + -0.1 4,336,576 + +0.2 4,336,576 + -1.1 4,336,577 - -0.6 4,336,647 + -1.3 4,336,675 - -0.7 4,336,694 + +0.7 4,336,694 + -0.6 4,336,695 - +0.5 4,336,791 - ECD_04073 0.11 +0.7 4,336,791 - ECD_04073 0.11 -0.2 4,336,887 + ECD_04073 0.17 -0.1 4,336,906 + ECD_04073 0.19 -1.4 4,336,957 - ECD_04073 0.22 -0.5 4,337,090 + ECD_04073 0.31 +0.4 4,337,090 + ECD_04073 0.31 +2.3 4,337,091 - ECD_04073 0.31 -0.3 4,337,091 - ECD_04073 0.31 +0.1 4,337,091 - ECD_04073 0.31 -2.0 4,337,175 + ECD_04073 0.36 +0.1 4,337,175 + ECD_04073 0.36 -1.0 4,337,176 - ECD_04073 0.36 +0.9 4,337,179 + ECD_04073 0.36 -0.2 4,337,179 + ECD_04073 0.36 -1.9 4,337,180 - ECD_04073 0.36 +0.9 4,337,180 - ECD_04073 0.36 -2.0 4,337,361 + ECD_04073 0.48 -0.2 4,337,522 - ECD_04073 0.59 +0.2 4,337,567 + ECD_04073 0.62 -0.1 4,337,567 + ECD_04073 0.62 -2.2 4,337,568 - ECD_04073 0.62 +0.7 4,337,568 - ECD_04073 0.62 -0.3 4,337,571 + ECD_04073 0.62 -0.1
Or see this region's nucleotide sequence