Strain Fitness in Escherichia coli BL21 around ECD_04072

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04071 and ECD_04072 are separated by 92 nucleotidesECD_04072 and ECD_04073 overlap by 4 nucleotides ECD_04071: ECD_04071 - Hexuronate transporter, at 4,333,179 to 4,334,456 _04071 ECD_04072: ECD_04072 - putative oxidoreductase, at 4,334,549 to 4,336,621 _04072 ECD_04073: ECD_04073 - putative acetyl-CoA:acetoacetyl-CoA transferase, at 4,336,618 to 4,338,159 _04073 Position (kb) 4334 4335 4336 4337Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4at 4333.677 kb on - strand, within ECD_04071at 4333.817 kb on + strand, within ECD_04071at 4333.855 kb on + strand, within ECD_04071at 4333.973 kb on + strand, within ECD_04071at 4334.036 kb on + strand, within ECD_04071at 4334.148 kb on - strand, within ECD_04071at 4334.283 kb on - strand, within ECD_04071at 4334.367 kb on - strandat 4334.371 kb on - strandat 4334.371 kb on - strandat 4334.371 kb on - strandat 4334.413 kb on - strandat 4334.776 kb on + strand, within ECD_04072at 4334.780 kb on + strand, within ECD_04072at 4334.781 kb on - strand, within ECD_04072at 4334.815 kb on + strand, within ECD_04072at 4334.815 kb on + strand, within ECD_04072at 4334.817 kb on + strand, within ECD_04072at 4334.817 kb on + strand, within ECD_04072at 4334.817 kb on + strand, within ECD_04072at 4334.817 kb on + strand, within ECD_04072at 4334.817 kb on + strand, within ECD_04072at 4334.817 kb on + strand, within ECD_04072at 4334.818 kb on - strand, within ECD_04072at 4334.872 kb on + strand, within ECD_04072at 4334.872 kb on + strand, within ECD_04072at 4335.073 kb on + strand, within ECD_04072at 4335.086 kb on + strand, within ECD_04072at 4335.088 kb on + strand, within ECD_04072at 4335.089 kb on - strand, within ECD_04072at 4335.119 kb on + strand, within ECD_04072at 4335.120 kb on - strand, within ECD_04072at 4335.121 kb on + strand, within ECD_04072at 4335.122 kb on - strand, within ECD_04072at 4335.133 kb on + strand, within ECD_04072at 4335.311 kb on - strand, within ECD_04072at 4335.320 kb on - strand, within ECD_04072at 4335.320 kb on - strand, within ECD_04072at 4335.370 kb on + strand, within ECD_04072at 4335.382 kb on + strand, within ECD_04072at 4335.382 kb on + strand, within ECD_04072at 4335.383 kb on - strand, within ECD_04072at 4335.450 kb on + strand, within ECD_04072at 4335.537 kb on - strand, within ECD_04072at 4335.574 kb on + strand, within ECD_04072at 4335.575 kb on - strand, within ECD_04072at 4335.575 kb on - strand, within ECD_04072at 4335.695 kb on - strand, within ECD_04072at 4335.696 kb on + strand, within ECD_04072at 4335.723 kb on + strand, within ECD_04072at 4335.727 kb on + strand, within ECD_04072at 4335.727 kb on + strand, within ECD_04072at 4335.728 kb on - strand, within ECD_04072at 4335.728 kb on - strand, within ECD_04072at 4335.729 kb on + strand, within ECD_04072at 4335.730 kb on - strand, within ECD_04072at 4335.730 kb on - strand, within ECD_04072at 4335.730 kb on - strand, within ECD_04072at 4335.743 kb on + strand, within ECD_04072at 4335.743 kb on + strand, within ECD_04072at 4335.743 kb on + strand, within ECD_04072at 4335.743 kb on + strand, within ECD_04072at 4335.744 kb on - strand, within ECD_04072at 4335.747 kb on + strand, within ECD_04072at 4335.747 kb on + strand, within ECD_04072at 4335.747 kb on + strand, within ECD_04072at 4335.747 kb on + strand, within ECD_04072at 4335.747 kb on + strand, within ECD_04072at 4335.747 kb on + strand, within ECD_04072at 4335.748 kb on - strand, within ECD_04072at 4335.748 kb on - strand, within ECD_04072at 4335.748 kb on - strand, within ECD_04072at 4335.791 kb on + strand, within ECD_04072at 4335.921 kb on - strand, within ECD_04072at 4336.039 kb on + strand, within ECD_04072at 4336.218 kb on + strand, within ECD_04072at 4336.218 kb on + strand, within ECD_04072at 4336.219 kb on - strand, within ECD_04072at 4336.251 kb on - strand, within ECD_04072at 4336.264 kb on - strand, within ECD_04072at 4336.264 kb on - strand, within ECD_04072at 4336.396 kb on + strand, within ECD_04072at 4336.396 kb on + strand, within ECD_04072at 4336.396 kb on + strand, within ECD_04072at 4336.397 kb on - strand, within ECD_04072at 4336.397 kb on - strand, within ECD_04072at 4336.398 kb on + strand, within ECD_04072at 4336.398 kb on + strand, within ECD_04072at 4336.398 kb on + strand, within ECD_04072at 4336.398 kb on + strand, within ECD_04072at 4336.398 kb on + strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.399 kb on - strand, within ECD_04072at 4336.400 kb on + strand, within ECD_04072at 4336.401 kb on - strand, within ECD_04072at 4336.401 kb on - strand, within ECD_04072at 4336.401 kb on - strand, within ECD_04072at 4336.484 kb on + strandat 4336.485 kb on - strandat 4336.513 kb on - strandat 4336.576 kb on + strandat 4336.576 kb on + strandat 4336.576 kb on + strandat 4336.577 kb on - strandat 4336.647 kb on + strandat 4336.675 kb on - strandat 4336.694 kb on + strandat 4336.694 kb on + strandat 4336.695 kb on - strandat 4336.791 kb on - strand, within ECD_04073at 4336.791 kb on - strand, within ECD_04073at 4336.887 kb on + strand, within ECD_04073at 4336.906 kb on + strand, within ECD_04073at 4336.957 kb on - strand, within ECD_04073at 4337.090 kb on + strand, within ECD_04073at 4337.090 kb on + strand, within ECD_04073at 4337.091 kb on - strand, within ECD_04073at 4337.091 kb on - strand, within ECD_04073at 4337.091 kb on - strand, within ECD_04073at 4337.175 kb on + strand, within ECD_04073at 4337.175 kb on + strand, within ECD_04073at 4337.176 kb on - strand, within ECD_04073at 4337.179 kb on + strand, within ECD_04073at 4337.179 kb on + strand, within ECD_04073at 4337.180 kb on - strand, within ECD_04073at 4337.180 kb on - strand, within ECD_04073at 4337.361 kb on + strand, within ECD_04073at 4337.522 kb on - strand, within ECD_04073at 4337.567 kb on + strand, within ECD_04073at 4337.567 kb on + strand, within ECD_04073at 4337.568 kb on - strand, within ECD_04073at 4337.568 kb on - strand, within ECD_04073at 4337.571 kb on + strand, within ECD_04073

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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4,333,677 - ECD_04071 0.39 +0.8
4,333,817 + ECD_04071 0.50 -1.0
4,333,855 + ECD_04071 0.53 -0.2
4,333,973 + ECD_04071 0.62 -0.0
4,334,036 + ECD_04071 0.67 -2.2
4,334,148 - ECD_04071 0.76 +0.8
4,334,283 - ECD_04071 0.86 -2.5
4,334,367 - +0.4
4,334,371 - -1.3
4,334,371 - +0.6
4,334,371 - +0.8
4,334,413 - -0.9
4,334,776 + ECD_04072 0.11 +0.3
4,334,780 + ECD_04072 0.11 -0.0
4,334,781 - ECD_04072 0.11 +0.3
4,334,815 + ECD_04072 0.13 -0.1
4,334,815 + ECD_04072 0.13 -0.6
4,334,817 + ECD_04072 0.13 -0.2
4,334,817 + ECD_04072 0.13 +1.1
4,334,817 + ECD_04072 0.13 +1.0
4,334,817 + ECD_04072 0.13 -0.9
4,334,817 + ECD_04072 0.13 -2.8
4,334,817 + ECD_04072 0.13 -0.1
4,334,818 - ECD_04072 0.13 +0.6
4,334,872 + ECD_04072 0.16 +0.3
4,334,872 + ECD_04072 0.16 -1.4
4,335,073 + ECD_04072 0.25 -1.4
4,335,086 + ECD_04072 0.26 -0.3
4,335,088 + ECD_04072 0.26 -0.4
4,335,089 - ECD_04072 0.26 -0.9
4,335,119 + ECD_04072 0.27 -0.6
4,335,120 - ECD_04072 0.28 -0.5
4,335,121 + ECD_04072 0.28 -1.4
4,335,122 - ECD_04072 0.28 -1.5
4,335,133 + ECD_04072 0.28 -0.7
4,335,311 - ECD_04072 0.37 +2.5
4,335,320 - ECD_04072 0.37 -1.6
4,335,320 - ECD_04072 0.37 -1.3
4,335,370 + ECD_04072 0.40 -0.5
4,335,382 + ECD_04072 0.40 +0.6
4,335,382 + ECD_04072 0.40 -1.0
4,335,383 - ECD_04072 0.40 -0.2
4,335,450 + ECD_04072 0.43 -0.1
4,335,537 - ECD_04072 0.48 -0.8
4,335,574 + ECD_04072 0.49 -2.1
4,335,575 - ECD_04072 0.49 -0.4
4,335,575 - ECD_04072 0.49 -0.9
4,335,695 - ECD_04072 0.55 +0.9
4,335,696 + ECD_04072 0.55 -1.7
4,335,723 + ECD_04072 0.57 +0.6
4,335,727 + ECD_04072 0.57 +1.1
4,335,727 + ECD_04072 0.57 -0.6
4,335,728 - ECD_04072 0.57 -0.2
4,335,728 - ECD_04072 0.57 -1.1
4,335,729 + ECD_04072 0.57 +0.1
4,335,730 - ECD_04072 0.57 -2.9
4,335,730 - ECD_04072 0.57 -1.0
4,335,730 - ECD_04072 0.57 +0.2
4,335,743 + ECD_04072 0.58 -1.8
4,335,743 + ECD_04072 0.58 -1.4
4,335,743 + ECD_04072 0.58 +0.3
4,335,743 + ECD_04072 0.58 -3.1
4,335,744 - ECD_04072 0.58 -1.3
4,335,747 + ECD_04072 0.58 +0.9
4,335,747 + ECD_04072 0.58 -1.0
4,335,747 + ECD_04072 0.58 +1.4
4,335,747 + ECD_04072 0.58 -0.4
4,335,747 + ECD_04072 0.58 +1.1
4,335,747 + ECD_04072 0.58 -2.5
4,335,748 - ECD_04072 0.58 +0.7
4,335,748 - ECD_04072 0.58 +0.2
4,335,748 - ECD_04072 0.58 -0.4
4,335,791 + ECD_04072 0.60 -1.3
4,335,921 - ECD_04072 0.66 +0.3
4,336,039 + ECD_04072 0.72 -1.4
4,336,218 + ECD_04072 0.81 -2.4
4,336,218 + ECD_04072 0.81 -0.4
4,336,219 - ECD_04072 0.81 -0.5
4,336,251 - ECD_04072 0.82 +0.1
4,336,264 - ECD_04072 0.83 -0.4
4,336,264 - ECD_04072 0.83 -0.6
4,336,396 + ECD_04072 0.89 +0.1
4,336,396 + ECD_04072 0.89 -1.2
4,336,396 + ECD_04072 0.89 +0.3
4,336,397 - ECD_04072 0.89 +0.9
4,336,397 - ECD_04072 0.89 -1.4
4,336,398 + ECD_04072 0.89 +0.3
4,336,398 + ECD_04072 0.89 -0.4
4,336,398 + ECD_04072 0.89 -1.6
4,336,398 + ECD_04072 0.89 +0.3
4,336,398 + ECD_04072 0.89 -0.1
4,336,399 - ECD_04072 0.89 +3.9
4,336,399 - ECD_04072 0.89 +0.8
4,336,399 - ECD_04072 0.89 -1.3
4,336,399 - ECD_04072 0.89 -0.4
4,336,399 - ECD_04072 0.89 +0.5
4,336,399 - ECD_04072 0.89 -1.9
4,336,399 - ECD_04072 0.89 -0.2
4,336,399 - ECD_04072 0.89 -3.5
4,336,399 - ECD_04072 0.89 +0.5
4,336,399 - ECD_04072 0.89 +1.2
4,336,399 - ECD_04072 0.89 -0.2
4,336,399 - ECD_04072 0.89 -0.5
4,336,400 + ECD_04072 0.89 -3.2
4,336,401 - ECD_04072 0.89 -1.3
4,336,401 - ECD_04072 0.89 +0.2
4,336,401 - ECD_04072 0.89 +1.4
4,336,484 + -0.4
4,336,485 - -0.6
4,336,513 - +0.1
4,336,576 + -0.1
4,336,576 + +0.2
4,336,576 + -1.1
4,336,577 - -0.6
4,336,647 + -1.3
4,336,675 - -0.7
4,336,694 + +0.7
4,336,694 + -0.6
4,336,695 - +0.5
4,336,791 - ECD_04073 0.11 +0.7
4,336,791 - ECD_04073 0.11 -0.2
4,336,887 + ECD_04073 0.17 -0.1
4,336,906 + ECD_04073 0.19 -1.4
4,336,957 - ECD_04073 0.22 -0.5
4,337,090 + ECD_04073 0.31 +0.4
4,337,090 + ECD_04073 0.31 +2.3
4,337,091 - ECD_04073 0.31 -0.3
4,337,091 - ECD_04073 0.31 +0.1
4,337,091 - ECD_04073 0.31 -2.0
4,337,175 + ECD_04073 0.36 +0.1
4,337,175 + ECD_04073 0.36 -1.0
4,337,176 - ECD_04073 0.36 +0.9
4,337,179 + ECD_04073 0.36 -0.2
4,337,179 + ECD_04073 0.36 -1.9
4,337,180 - ECD_04073 0.36 +0.9
4,337,180 - ECD_04073 0.36 -2.0
4,337,361 + ECD_04073 0.48 -0.2
4,337,522 - ECD_04073 0.59 +0.2
4,337,567 + ECD_04073 0.62 -0.1
4,337,567 + ECD_04073 0.62 -2.2
4,337,568 - ECD_04073 0.62 +0.7
4,337,568 - ECD_04073 0.62 -0.3
4,337,571 + ECD_04073 0.62 -0.1

Or see this region's nucleotide sequence