Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03810 and ECD_03811 are separated by 134 nucleotides ECD_03811 and ECD_03812 are separated by 22 nucleotides
ECD_03810: ECD_03810 - fructose 1,6-bisphosphatase II, at 4,022,491 to 4,023,501
_03810
ECD_03811: ECD_03811 - glycerol kinase, at 4,023,636 to 4,025,144
_03811
ECD_03812: ECD_03812 - glycerol facilitator, at 4,025,167 to 4,026,012
_03812
Position (kb)
4023
4024
4025
4026 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4022.646 kb on + strand, within ECD_03810 at 4022.704 kb on + strand, within ECD_03810 at 4022.705 kb on - strand, within ECD_03810 at 4022.705 kb on - strand, within ECD_03810 at 4022.705 kb on - strand, within ECD_03810 at 4022.770 kb on - strand, within ECD_03810 at 4022.830 kb on + strand, within ECD_03810 at 4022.830 kb on + strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.831 kb on - strand, within ECD_03810 at 4022.886 kb on - strand, within ECD_03810 at 4022.913 kb on + strand, within ECD_03810 at 4022.953 kb on - strand, within ECD_03810 at 4022.959 kb on + strand, within ECD_03810 at 4022.960 kb on - strand, within ECD_03810 at 4022.965 kb on + strand, within ECD_03810 at 4023.012 kb on + strand, within ECD_03810 at 4023.144 kb on + strand, within ECD_03810 at 4023.145 kb on - strand, within ECD_03810 at 4023.145 kb on - strand, within ECD_03810 at 4023.145 kb on - strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.146 kb on + strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.147 kb on - strand, within ECD_03810 at 4023.150 kb on + strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.151 kb on - strand, within ECD_03810 at 4023.258 kb on + strand, within ECD_03810 at 4023.258 kb on + strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.259 kb on - strand, within ECD_03810 at 4023.263 kb on - strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.302 kb on + strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.303 kb on - strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.378 kb on + strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.379 kb on - strand, within ECD_03810 at 4023.502 kb on - strand at 4023.511 kb on + strand at 4023.537 kb on + strand at 4023.538 kb on - strand at 4023.538 kb on - strand at 4023.612 kb on + strand at 4023.632 kb on + strand at 4023.632 kb on + strand at 4023.633 kb on - strand at 4023.700 kb on + strand at 4023.704 kb on + strand at 4023.704 kb on + strand at 4023.704 kb on + strand at 4023.903 kb on + strand, within ECD_03811 at 4023.904 kb on - strand, within ECD_03811 at 4023.904 kb on - strand, within ECD_03811 at 4023.904 kb on - strand, within ECD_03811 at 4023.986 kb on - strand, within ECD_03811 at 4023.986 kb on - strand, within ECD_03811 at 4024.011 kb on + strand, within ECD_03811 at 4024.012 kb on - strand, within ECD_03811 at 4024.013 kb on + strand, within ECD_03811 at 4024.014 kb on - strand, within ECD_03811 at 4024.097 kb on + strand, within ECD_03811 at 4024.097 kb on + strand, within ECD_03811 at 4024.098 kb on - strand, within ECD_03811 at 4024.114 kb on + strand, within ECD_03811 at 4024.114 kb on + strand, within ECD_03811 at 4024.114 kb on + strand, within ECD_03811 at 4024.115 kb on - strand, within ECD_03811 at 4024.115 kb on - strand, within ECD_03811 at 4024.115 kb on - strand, within ECD_03811 at 4024.115 kb on - strand, within ECD_03811 at 4024.243 kb on + strand, within ECD_03811 at 4024.243 kb on + strand, within ECD_03811 at 4024.244 kb on - strand, within ECD_03811 at 4024.348 kb on + strand, within ECD_03811 at 4024.349 kb on - strand, within ECD_03811 at 4024.349 kb on - strand, within ECD_03811 at 4024.460 kb on + strand, within ECD_03811 at 4024.461 kb on - strand, within ECD_03811 at 4024.471 kb on + strand, within ECD_03811 at 4024.471 kb on + strand, within ECD_03811 at 4024.472 kb on - strand, within ECD_03811 at 4024.472 kb on - strand, within ECD_03811 at 4024.473 kb on + strand, within ECD_03811 at 4024.474 kb on - strand, within ECD_03811 at 4024.474 kb on - strand, within ECD_03811 at 4024.577 kb on + strand, within ECD_03811 at 4024.595 kb on - strand, within ECD_03811 at 4024.634 kb on + strand, within ECD_03811 at 4024.635 kb on - strand, within ECD_03811 at 4024.643 kb on + strand, within ECD_03811 at 4024.643 kb on + strand, within ECD_03811 at 4024.644 kb on - strand, within ECD_03811 at 4024.644 kb on - strand, within ECD_03811 at 4024.772 kb on + strand, within ECD_03811 at 4024.773 kb on - strand, within ECD_03811 at 4024.774 kb on + strand, within ECD_03811 at 4024.797 kb on + strand, within ECD_03811 at 4024.798 kb on - strand, within ECD_03811 at 4024.849 kb on + strand, within ECD_03811 at 4024.849 kb on + strand, within ECD_03811 at 4024.849 kb on + strand, within ECD_03811 at 4024.849 kb on + strand, within ECD_03811 at 4024.850 kb on - strand, within ECD_03811 at 4024.850 kb on - strand, within ECD_03811 at 4024.850 kb on - strand, within ECD_03811 at 4024.850 kb on - strand, within ECD_03811 at 4024.850 kb on - strand, within ECD_03811 at 4024.914 kb on - strand, within ECD_03811 at 4024.914 kb on - strand, within ECD_03811 at 4025.007 kb on + strand at 4025.008 kb on - strand at 4025.083 kb on - strand at 4025.148 kb on + strand at 4025.148 kb on + strand at 4025.149 kb on - strand at 4025.149 kb on - strand at 4025.165 kb on + strand at 4025.166 kb on - strand at 4025.166 kb on - strand at 4025.168 kb on + strand at 4025.168 kb on + strand at 4025.226 kb on + strand at 4025.275 kb on + strand, within ECD_03812 at 4025.276 kb on - strand, within ECD_03812 at 4025.276 kb on - strand, within ECD_03812 at 4025.276 kb on - strand, within ECD_03812 at 4025.293 kb on - strand, within ECD_03812 at 4025.319 kb on - strand, within ECD_03812 at 4025.319 kb on - strand, within ECD_03812 at 4025.433 kb on + strand, within ECD_03812 at 4025.433 kb on + strand, within ECD_03812 at 4025.433 kb on + strand, within ECD_03812 at 4025.433 kb on + strand, within ECD_03812 at 4025.433 kb on + strand, within ECD_03812 at 4025.433 kb on + strand, within ECD_03812 at 4025.433 kb on + strand, within ECD_03812 at 4025.434 kb on - strand, within ECD_03812 at 4025.434 kb on - strand, within ECD_03812 at 4025.495 kb on - strand, within ECD_03812 at 4025.600 kb on + strand, within ECD_03812 at 4025.605 kb on - strand, within ECD_03812 at 4025.687 kb on + strand, within ECD_03812 at 4025.690 kb on + strand, within ECD_03812 at 4025.799 kb on + strand, within ECD_03812 at 4025.812 kb on - strand, within ECD_03812 at 4025.843 kb on + strand, within ECD_03812 at 4025.844 kb on - strand, within ECD_03812 at 4025.844 kb on - strand, within ECD_03812 at 4026.031 kb on + strand at 4026.032 kb on - strand at 4026.032 kb on - strand at 4026.032 kb on - strand at 4026.043 kb on + strand at 4026.043 kb on + strand at 4026.043 kb on + strand at 4026.043 kb on + strand at 4026.044 kb on - strand at 4026.088 kb on + strand at 4026.088 kb on + strand at 4026.120 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 4,022,646 + ECD_03810 0.15 -0.9 4,022,704 + ECD_03810 0.21 +0.5 4,022,705 - ECD_03810 0.21 -1.9 4,022,705 - ECD_03810 0.21 +0.4 4,022,705 - ECD_03810 0.21 -0.4 4,022,770 - ECD_03810 0.28 -3.7 4,022,830 + ECD_03810 0.34 -0.9 4,022,830 + ECD_03810 0.34 +0.1 4,022,831 - ECD_03810 0.34 -0.1 4,022,831 - ECD_03810 0.34 +0.7 4,022,831 - ECD_03810 0.34 -0.6 4,022,831 - ECD_03810 0.34 +0.0 4,022,831 - ECD_03810 0.34 -0.4 4,022,886 - ECD_03810 0.39 -0.8 4,022,913 + ECD_03810 0.42 -0.0 4,022,953 - ECD_03810 0.46 +0.5 4,022,959 + ECD_03810 0.46 +0.4 4,022,960 - ECD_03810 0.46 +0.8 4,022,965 + ECD_03810 0.47 -0.6 4,023,012 + ECD_03810 0.52 +0.1 4,023,144 + ECD_03810 0.65 +0.1 4,023,145 - ECD_03810 0.65 -0.9 4,023,145 - ECD_03810 0.65 -0.1 4,023,145 - ECD_03810 0.65 +0.1 4,023,146 + ECD_03810 0.65 +0.4 4,023,146 + ECD_03810 0.65 -0.9 4,023,146 + ECD_03810 0.65 +0.4 4,023,146 + ECD_03810 0.65 -2.5 4,023,146 + ECD_03810 0.65 -0.8 4,023,146 + ECD_03810 0.65 -0.5 4,023,146 + ECD_03810 0.65 +0.6 4,023,146 + ECD_03810 0.65 -0.6 4,023,146 + ECD_03810 0.65 -0.5 4,023,146 + ECD_03810 0.65 -1.4 4,023,146 + ECD_03810 0.65 -1.6 4,023,146 + ECD_03810 0.65 -1.3 4,023,146 + ECD_03810 0.65 -1.5 4,023,146 + ECD_03810 0.65 +1.2 4,023,146 + ECD_03810 0.65 -0.5 4,023,146 + ECD_03810 0.65 +0.5 4,023,146 + ECD_03810 0.65 -0.7 4,023,146 + ECD_03810 0.65 -2.2 4,023,147 - ECD_03810 0.65 -0.8 4,023,147 - ECD_03810 0.65 -0.8 4,023,147 - ECD_03810 0.65 -0.7 4,023,147 - ECD_03810 0.65 +0.8 4,023,147 - ECD_03810 0.65 +0.3 4,023,147 - ECD_03810 0.65 -0.2 4,023,147 - ECD_03810 0.65 +0.4 4,023,147 - ECD_03810 0.65 -2.2 4,023,147 - ECD_03810 0.65 -0.4 4,023,147 - ECD_03810 0.65 +0.7 4,023,147 - ECD_03810 0.65 +1.2 4,023,147 - ECD_03810 0.65 -0.4 4,023,147 - ECD_03810 0.65 -0.4 4,023,147 - ECD_03810 0.65 +0.4 4,023,147 - ECD_03810 0.65 -0.3 4,023,147 - ECD_03810 0.65 +1.8 4,023,147 - ECD_03810 0.65 +1.0 4,023,147 - ECD_03810 0.65 +0.2 4,023,147 - ECD_03810 0.65 -0.4 4,023,147 - ECD_03810 0.65 -1.0 4,023,147 - ECD_03810 0.65 -0.1 4,023,150 + ECD_03810 0.65 -1.9 4,023,151 - ECD_03810 0.65 -0.3 4,023,151 - ECD_03810 0.65 +0.4 4,023,151 - ECD_03810 0.65 -0.1 4,023,151 - ECD_03810 0.65 -0.9 4,023,258 + ECD_03810 0.76 -1.3 4,023,258 + ECD_03810 0.76 +1.4 4,023,259 - ECD_03810 0.76 -0.3 4,023,259 - ECD_03810 0.76 -1.7 4,023,259 - ECD_03810 0.76 -1.1 4,023,259 - ECD_03810 0.76 +0.2 4,023,263 - ECD_03810 0.76 +0.9 4,023,302 + ECD_03810 0.80 -1.5 4,023,302 + ECD_03810 0.80 +0.1 4,023,302 + ECD_03810 0.80 +0.9 4,023,302 + ECD_03810 0.80 +0.7 4,023,302 + ECD_03810 0.80 -1.5 4,023,303 - ECD_03810 0.80 -0.1 4,023,303 - ECD_03810 0.80 -0.9 4,023,303 - ECD_03810 0.80 +0.5 4,023,303 - ECD_03810 0.80 -0.2 4,023,303 - ECD_03810 0.80 -0.8 4,023,378 + ECD_03810 0.88 -1.3 4,023,378 + ECD_03810 0.88 +1.4 4,023,378 + ECD_03810 0.88 +0.9 4,023,378 + ECD_03810 0.88 +1.0 4,023,378 + ECD_03810 0.88 +1.2 4,023,378 + ECD_03810 0.88 +0.3 4,023,378 + ECD_03810 0.88 +0.2 4,023,379 - ECD_03810 0.88 +0.4 4,023,379 - ECD_03810 0.88 -0.1 4,023,379 - ECD_03810 0.88 +0.1 4,023,379 - ECD_03810 0.88 -1.8 4,023,502 - -0.2 4,023,511 + +1.3 4,023,537 + -1.3 4,023,538 - +0.5 4,023,538 - -0.5 4,023,612 + +0.1 4,023,632 + +0.3 4,023,632 + -3.6 4,023,633 - +0.8 4,023,700 + +1.0 4,023,704 + -0.3 4,023,704 + +0.6 4,023,704 + -3.0 4,023,903 + ECD_03811 0.18 -2.7 4,023,904 - ECD_03811 0.18 +1.4 4,023,904 - ECD_03811 0.18 -0.3 4,023,904 - ECD_03811 0.18 +0.8 4,023,986 - ECD_03811 0.23 +0.3 4,023,986 - ECD_03811 0.23 -0.5 4,024,011 + ECD_03811 0.25 +0.8 4,024,012 - ECD_03811 0.25 -0.8 4,024,013 + ECD_03811 0.25 -1.6 4,024,014 - ECD_03811 0.25 -0.7 4,024,097 + ECD_03811 0.31 +1.4 4,024,097 + ECD_03811 0.31 -2.6 4,024,098 - ECD_03811 0.31 -0.1 4,024,114 + ECD_03811 0.32 -0.3 4,024,114 + ECD_03811 0.32 +2.0 4,024,114 + ECD_03811 0.32 -2.1 4,024,115 - ECD_03811 0.32 -1.7 4,024,115 - ECD_03811 0.32 -0.9 4,024,115 - ECD_03811 0.32 +1.4 4,024,115 - ECD_03811 0.32 +0.7 4,024,243 + ECD_03811 0.40 -0.9 4,024,243 + ECD_03811 0.40 -2.0 4,024,244 - ECD_03811 0.40 -0.4 4,024,348 + ECD_03811 0.47 -0.4 4,024,349 - ECD_03811 0.47 -2.1 4,024,349 - ECD_03811 0.47 -0.9 4,024,460 + ECD_03811 0.55 -1.0 4,024,461 - ECD_03811 0.55 -0.1 4,024,471 + ECD_03811 0.55 -1.8 4,024,471 + ECD_03811 0.55 +1.2 4,024,472 - ECD_03811 0.55 -1.0 4,024,472 - ECD_03811 0.55 -1.3 4,024,473 + ECD_03811 0.55 -0.9 4,024,474 - ECD_03811 0.56 -0.6 4,024,474 - ECD_03811 0.56 +1.6 4,024,577 + ECD_03811 0.62 -1.2 4,024,595 - ECD_03811 0.64 -0.6 4,024,634 + ECD_03811 0.66 -0.5 4,024,635 - ECD_03811 0.66 -1.1 4,024,643 + ECD_03811 0.67 +0.9 4,024,643 + ECD_03811 0.67 -2.2 4,024,644 - ECD_03811 0.67 +1.7 4,024,644 - ECD_03811 0.67 +1.6 4,024,772 + ECD_03811 0.75 -1.4 4,024,773 - ECD_03811 0.75 -0.8 4,024,774 + ECD_03811 0.75 -0.1 4,024,797 + ECD_03811 0.77 +0.3 4,024,798 - ECD_03811 0.77 +0.4 4,024,849 + ECD_03811 0.80 +0.4 4,024,849 + ECD_03811 0.80 -0.2 4,024,849 + ECD_03811 0.80 -1.2 4,024,849 + ECD_03811 0.80 -1.2 4,024,850 - ECD_03811 0.80 -0.2 4,024,850 - ECD_03811 0.80 -0.5 4,024,850 - ECD_03811 0.80 +0.1 4,024,850 - ECD_03811 0.80 -2.2 4,024,850 - ECD_03811 0.80 -0.2 4,024,914 - ECD_03811 0.85 +0.1 4,024,914 - ECD_03811 0.85 +0.5 4,025,007 + -0.0 4,025,008 - -2.4 4,025,083 - +0.5 4,025,148 + -0.4 4,025,148 + -0.3 4,025,149 - +0.4 4,025,149 - +0.3 4,025,165 + -0.2 4,025,166 - +0.2 4,025,166 - +0.6 4,025,168 + +1.2 4,025,168 + -0.2 4,025,226 + -2.3 4,025,275 + ECD_03812 0.13 -0.8 4,025,276 - ECD_03812 0.13 -2.6 4,025,276 - ECD_03812 0.13 +1.6 4,025,276 - ECD_03812 0.13 +0.2 4,025,293 - ECD_03812 0.15 +1.1 4,025,319 - ECD_03812 0.18 -0.1 4,025,319 - ECD_03812 0.18 -0.0 4,025,433 + ECD_03812 0.31 -0.3 4,025,433 + ECD_03812 0.31 -0.2 4,025,433 + ECD_03812 0.31 +0.1 4,025,433 + ECD_03812 0.31 +2.7 4,025,433 + ECD_03812 0.31 -3.2 4,025,433 + ECD_03812 0.31 +0.5 4,025,433 + ECD_03812 0.31 -0.8 4,025,434 - ECD_03812 0.32 +0.5 4,025,434 - ECD_03812 0.32 +1.4 4,025,495 - ECD_03812 0.39 +0.2 4,025,600 + ECD_03812 0.51 -0.3 4,025,605 - ECD_03812 0.52 -2.4 4,025,687 + ECD_03812 0.61 +0.0 4,025,690 + ECD_03812 0.62 +0.6 4,025,799 + ECD_03812 0.75 -0.7 4,025,812 - ECD_03812 0.76 -1.0 4,025,843 + ECD_03812 0.80 +0.7 4,025,844 - ECD_03812 0.80 -2.2 4,025,844 - ECD_03812 0.80 -0.3 4,026,031 + -0.9 4,026,032 - +0.4 4,026,032 - +0.1 4,026,032 - -0.4 4,026,043 + -0.9 4,026,043 + -2.9 4,026,043 + -1.8 4,026,043 + +1.0 4,026,044 - -0.1 4,026,088 + +0.0 4,026,088 + +0.2 4,026,120 + +1.4
Or see this region's nucleotide sequence