Strain Fitness in Escherichia coli BL21 around ECD_03645

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03644 and ECD_03645 are separated by 352 nucleotidesECD_03645 and ECD_03646 are separated by 139 nucleotides ECD_03644: ECD_03644 - magnesium chelatase family protein and putative transcriptional regulator, at 3,838,689 to 3,840,209 _03644 ECD_03645: ECD_03645 - ilvG operon leader peptide, at 3,840,562 to 3,840,660 _03645 ECD_03646: ECD_03646 - acetolactate synthase II, valine insensitive, large subunit, at 3,840,800 to 3,842,446 _03646 Position (kb) 3840 3841Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3839.652 kb on + strand, within ECD_03644at 3839.653 kb on - strand, within ECD_03644at 3839.653 kb on - strand, within ECD_03644at 3839.653 kb on - strand, within ECD_03644at 3839.702 kb on + strand, within ECD_03644at 3839.819 kb on + strand, within ECD_03644at 3839.820 kb on - strand, within ECD_03644at 3839.822 kb on + strand, within ECD_03644at 3839.823 kb on - strand, within ECD_03644at 3839.823 kb on - strand, within ECD_03644at 3839.893 kb on - strand, within ECD_03644at 3839.900 kb on - strand, within ECD_03644at 3839.907 kb on + strand, within ECD_03644at 3839.908 kb on - strand, within ECD_03644at 3839.908 kb on - strand, within ECD_03644at 3839.912 kb on + strand, within ECD_03644at 3839.912 kb on + strand, within ECD_03644at 3839.961 kb on + strand, within ECD_03644at 3839.961 kb on + strand, within ECD_03644at 3839.962 kb on - strand, within ECD_03644at 3839.962 kb on - strand, within ECD_03644at 3839.962 kb on - strand, within ECD_03644at 3839.962 kb on - strand, within ECD_03644at 3840.032 kb on - strand, within ECD_03644at 3840.131 kb on + strandat 3840.137 kb on + strandat 3840.137 kb on + strandat 3840.138 kb on - strandat 3840.138 kb on - strandat 3840.138 kb on - strandat 3840.138 kb on - strandat 3840.138 kb on - strandat 3840.141 kb on + strandat 3840.141 kb on + strandat 3840.141 kb on + strandat 3840.141 kb on + strandat 3840.142 kb on - strandat 3840.142 kb on - strandat 3840.142 kb on - strandat 3840.142 kb on - strandat 3840.169 kb on - strandat 3840.209 kb on + strandat 3840.210 kb on - strandat 3840.210 kb on - strandat 3840.210 kb on - strandat 3840.210 kb on - strandat 3840.210 kb on - strandat 3840.231 kb on + strandat 3840.232 kb on - strandat 3840.232 kb on - strandat 3840.239 kb on + strandat 3840.240 kb on - strandat 3840.245 kb on - strandat 3840.295 kb on + strandat 3840.370 kb on + strandat 3840.371 kb on - strandat 3840.512 kb on + strandat 3840.513 kb on - strandat 3840.517 kb on + strandat 3840.575 kb on + strand, within ECD_03645at 3840.575 kb on + strand, within ECD_03645at 3840.680 kb on + strandat 3840.681 kb on - strandat 3840.795 kb on + strandat 3840.795 kb on + strandat 3840.799 kb on + strandat 3840.799 kb on + strandat 3840.799 kb on + strandat 3840.822 kb on + strandat 3840.823 kb on - strandat 3840.823 kb on - strandat 3840.902 kb on + strandat 3840.902 kb on + strandat 3840.902 kb on + strandat 3840.903 kb on - strandat 3840.903 kb on - strandat 3840.903 kb on - strandat 3840.927 kb on + strandat 3840.928 kb on - strandat 3840.928 kb on - strandat 3840.928 kb on - strandat 3840.969 kb on - strand, within ECD_03646at 3840.996 kb on + strand, within ECD_03646at 3840.996 kb on + strand, within ECD_03646at 3840.996 kb on + strand, within ECD_03646at 3840.997 kb on - strand, within ECD_03646at 3840.997 kb on - strand, within ECD_03646at 3841.001 kb on - strand, within ECD_03646at 3841.001 kb on - strand, within ECD_03646at 3841.059 kb on + strand, within ECD_03646at 3841.059 kb on + strand, within ECD_03646at 3841.059 kb on + strand, within ECD_03646at 3841.060 kb on - strand, within ECD_03646at 3841.163 kb on - strand, within ECD_03646at 3841.279 kb on + strand, within ECD_03646at 3841.280 kb on - strand, within ECD_03646at 3841.288 kb on - strand, within ECD_03646at 3841.403 kb on + strand, within ECD_03646at 3841.403 kb on + strand, within ECD_03646at 3841.403 kb on + strand, within ECD_03646at 3841.403 kb on + strand, within ECD_03646at 3841.403 kb on + strand, within ECD_03646at 3841.404 kb on - strand, within ECD_03646at 3841.404 kb on - strand, within ECD_03646at 3841.487 kb on - strand, within ECD_03646at 3841.526 kb on + strand, within ECD_03646at 3841.529 kb on + strand, within ECD_03646at 3841.530 kb on - strand, within ECD_03646

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,839,652 + ECD_03644 0.63 +0.2
3,839,653 - ECD_03644 0.63 +0.1
3,839,653 - ECD_03644 0.63 +1.9
3,839,653 - ECD_03644 0.63 -0.8
3,839,702 + ECD_03644 0.67 -1.3
3,839,819 + ECD_03644 0.74 -0.3
3,839,820 - ECD_03644 0.74 +0.6
3,839,822 + ECD_03644 0.74 -3.4
3,839,823 - ECD_03644 0.75 -2.0
3,839,823 - ECD_03644 0.75 +1.0
3,839,893 - ECD_03644 0.79 -0.5
3,839,900 - ECD_03644 0.80 -2.6
3,839,907 + ECD_03644 0.80 -0.5
3,839,908 - ECD_03644 0.80 -1.4
3,839,908 - ECD_03644 0.80 +1.7
3,839,912 + ECD_03644 0.80 -0.2
3,839,912 + ECD_03644 0.80 +1.0
3,839,961 + ECD_03644 0.84 -0.9
3,839,961 + ECD_03644 0.84 +0.4
3,839,962 - ECD_03644 0.84 +0.3
3,839,962 - ECD_03644 0.84 -0.6
3,839,962 - ECD_03644 0.84 +1.2
3,839,962 - ECD_03644 0.84 +0.4
3,840,032 - ECD_03644 0.88 +1.3
3,840,131 + +0.7
3,840,137 + +1.0
3,840,137 + -0.6
3,840,138 - -0.2
3,840,138 - +2.1
3,840,138 - -0.9
3,840,138 - -2.3
3,840,138 - +0.4
3,840,141 + -0.8
3,840,141 + +0.2
3,840,141 + +0.5
3,840,141 + +0.4
3,840,142 - -0.2
3,840,142 - -0.3
3,840,142 - +0.9
3,840,142 - -0.2
3,840,169 - +0.8
3,840,209 + -0.0
3,840,210 - -2.0
3,840,210 - -0.2
3,840,210 - +0.1
3,840,210 - -1.9
3,840,210 - +0.7
3,840,231 + -0.9
3,840,232 - -0.9
3,840,232 - -0.6
3,840,239 + -0.1
3,840,240 - -0.5
3,840,245 - +1.1
3,840,295 + -1.3
3,840,370 + +0.4
3,840,371 - -2.4
3,840,512 + +0.2
3,840,513 - -0.1
3,840,517 + +0.0
3,840,575 + ECD_03645 0.13 +1.1
3,840,575 + ECD_03645 0.13 +0.0
3,840,680 + +1.9
3,840,681 - -2.4
3,840,795 + +0.6
3,840,795 + +0.3
3,840,799 + +0.7
3,840,799 + +0.6
3,840,799 + +0.4
3,840,822 + -1.0
3,840,823 - -0.5
3,840,823 - +1.0
3,840,902 + -2.0
3,840,902 + -0.2
3,840,902 + -0.5
3,840,903 - +0.0
3,840,903 - -1.5
3,840,903 - -0.4
3,840,927 + -2.1
3,840,928 - +0.4
3,840,928 - +0.9
3,840,928 - -1.7
3,840,969 - ECD_03646 0.10 -1.9
3,840,996 + ECD_03646 0.12 +0.7
3,840,996 + ECD_03646 0.12 -2.0
3,840,996 + ECD_03646 0.12 -0.1
3,840,997 - ECD_03646 0.12 +0.1
3,840,997 - ECD_03646 0.12 +0.4
3,841,001 - ECD_03646 0.12 -2.2
3,841,001 - ECD_03646 0.12 +2.0
3,841,059 + ECD_03646 0.16 +0.1
3,841,059 + ECD_03646 0.16 +1.1
3,841,059 + ECD_03646 0.16 -0.1
3,841,060 - ECD_03646 0.16 -0.1
3,841,163 - ECD_03646 0.22 -0.2
3,841,279 + ECD_03646 0.29 +0.5
3,841,280 - ECD_03646 0.29 -0.7
3,841,288 - ECD_03646 0.30 +1.6
3,841,403 + ECD_03646 0.37 +0.9
3,841,403 + ECD_03646 0.37 +1.0
3,841,403 + ECD_03646 0.37 +1.2
3,841,403 + ECD_03646 0.37 -1.5
3,841,403 + ECD_03646 0.37 +0.3
3,841,404 - ECD_03646 0.37 +0.1
3,841,404 - ECD_03646 0.37 +1.9
3,841,487 - ECD_03646 0.42 +0.6
3,841,526 + ECD_03646 0.44 -2.0
3,841,529 + ECD_03646 0.44 -0.2
3,841,530 - ECD_03646 0.44 -1.4

Or see this region's nucleotide sequence