Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03628 and ECD_03629 are separated by 4 nucleotides ECD_03629 and ECD_03630 overlap by 7 nucleotides
ECD_03628: ECD_03628 - asparagine synthetase A, at 3,815,956 to 3,816,948
_03628
ECD_03629: ECD_03629 - stimulator of RavA ATPase activity; von Willebrand factor domain protein, at 3,816,953 to 3,818,404
_03629
ECD_03630: ECD_03630 - hexameric AAA+ MoxR family ATPase, putative molecular chaperone, at 3,818,398 to 3,819,894
_03630
Position (kb)
3816
3817
3818
3819 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3815.968 kb on + strand at 3815.968 kb on + strand at 3815.991 kb on + strand at 3815.991 kb on + strand at 3815.991 kb on + strand at 3816.093 kb on + strand, within ECD_03628 at 3816.197 kb on + strand, within ECD_03628 at 3816.293 kb on - strand, within ECD_03628 at 3816.320 kb on + strand, within ECD_03628 at 3816.388 kb on - strand, within ECD_03628 at 3816.458 kb on + strand, within ECD_03628 at 3816.458 kb on + strand, within ECD_03628 at 3816.473 kb on + strand, within ECD_03628 at 3816.473 kb on + strand, within ECD_03628 at 3816.543 kb on - strand, within ECD_03628 at 3816.607 kb on + strand, within ECD_03628 at 3816.660 kb on + strand, within ECD_03628 at 3816.906 kb on - strand at 3816.906 kb on - strand at 3816.947 kb on - strand at 3816.947 kb on - strand at 3816.949 kb on + strand at 3816.949 kb on + strand at 3816.950 kb on - strand at 3817.010 kb on - strand at 3817.296 kb on + strand, within ECD_03629 at 3817.324 kb on + strand, within ECD_03629 at 3817.324 kb on + strand, within ECD_03629 at 3817.324 kb on + strand, within ECD_03629 at 3817.325 kb on - strand, within ECD_03629 at 3817.325 kb on - strand, within ECD_03629 at 3817.327 kb on + strand, within ECD_03629 at 3817.327 kb on + strand, within ECD_03629 at 3817.327 kb on + strand, within ECD_03629 at 3817.327 kb on + strand, within ECD_03629 at 3817.328 kb on - strand, within ECD_03629 at 3817.328 kb on - strand, within ECD_03629 at 3817.328 kb on - strand, within ECD_03629 at 3817.328 kb on - strand, within ECD_03629 at 3817.328 kb on - strand, within ECD_03629 at 3817.329 kb on + strand, within ECD_03629 at 3817.329 kb on + strand, within ECD_03629 at 3817.329 kb on + strand, within ECD_03629 at 3817.329 kb on + strand, within ECD_03629 at 3817.329 kb on + strand, within ECD_03629 at 3817.329 kb on + strand, within ECD_03629 at 3817.330 kb on - strand, within ECD_03629 at 3817.438 kb on + strand, within ECD_03629 at 3817.464 kb on + strand, within ECD_03629 at 3817.465 kb on - strand, within ECD_03629 at 3817.471 kb on + strand, within ECD_03629 at 3817.472 kb on - strand, within ECD_03629 at 3817.475 kb on + strand, within ECD_03629 at 3817.475 kb on + strand, within ECD_03629 at 3817.475 kb on + strand, within ECD_03629 at 3817.475 kb on + strand, within ECD_03629 at 3817.476 kb on - strand, within ECD_03629 at 3817.476 kb on - strand, within ECD_03629 at 3817.476 kb on - strand, within ECD_03629 at 3817.476 kb on - strand, within ECD_03629 at 3817.528 kb on - strand, within ECD_03629 at 3817.589 kb on + strand, within ECD_03629 at 3817.590 kb on - strand, within ECD_03629 at 3817.619 kb on + strand, within ECD_03629 at 3817.624 kb on + strand, within ECD_03629 at 3817.625 kb on - strand, within ECD_03629 at 3817.819 kb on - strand, within ECD_03629 at 3817.819 kb on - strand, within ECD_03629 at 3817.849 kb on + strand, within ECD_03629 at 3817.879 kb on + strand, within ECD_03629 at 3817.880 kb on - strand, within ECD_03629 at 3817.880 kb on - strand, within ECD_03629 at 3817.937 kb on + strand, within ECD_03629 at 3817.937 kb on + strand, within ECD_03629 at 3817.937 kb on + strand, within ECD_03629 at 3817.938 kb on - strand, within ECD_03629 at 3817.961 kb on + strand, within ECD_03629 at 3817.961 kb on + strand, within ECD_03629 at 3817.962 kb on - strand, within ECD_03629 at 3817.964 kb on + strand, within ECD_03629 at 3817.964 kb on + strand, within ECD_03629 at 3817.964 kb on + strand, within ECD_03629 at 3817.965 kb on - strand, within ECD_03629 at 3817.965 kb on - strand, within ECD_03629 at 3817.976 kb on + strand, within ECD_03629 at 3818.004 kb on - strand, within ECD_03629 at 3818.004 kb on - strand, within ECD_03629 at 3818.056 kb on + strand, within ECD_03629 at 3818.057 kb on - strand, within ECD_03629 at 3818.111 kb on + strand, within ECD_03629 at 3818.129 kb on + strand, within ECD_03629 at 3818.175 kb on + strand, within ECD_03629 at 3818.175 kb on + strand, within ECD_03629 at 3818.176 kb on - strand, within ECD_03629 at 3818.176 kb on - strand, within ECD_03629 at 3818.176 kb on - strand, within ECD_03629 at 3818.383 kb on + strand at 3818.384 kb on - strand at 3818.384 kb on - strand at 3818.440 kb on + strand at 3818.440 kb on + strand at 3818.441 kb on - strand at 3818.461 kb on + strand at 3818.461 kb on + strand at 3818.520 kb on + strand at 3818.521 kb on - strand at 3818.557 kb on + strand, within ECD_03630 at 3818.557 kb on + strand, within ECD_03630 at 3818.614 kb on + strand, within ECD_03630 at 3818.615 kb on - strand, within ECD_03630 at 3818.620 kb on + strand, within ECD_03630 at 3818.620 kb on + strand, within ECD_03630 at 3818.620 kb on + strand, within ECD_03630 at 3818.620 kb on + strand, within ECD_03630 at 3818.621 kb on - strand, within ECD_03630 at 3818.630 kb on - strand, within ECD_03630 at 3818.719 kb on - strand, within ECD_03630 at 3818.772 kb on + strand, within ECD_03630 at 3818.772 kb on + strand, within ECD_03630 at 3818.772 kb on + strand, within ECD_03630 at 3818.773 kb on - strand, within ECD_03630 at 3818.824 kb on - strand, within ECD_03630 at 3818.995 kb on + strand, within ECD_03630 at 3819.038 kb on + strand, within ECD_03630 at 3819.039 kb on - strand, within ECD_03630 at 3819.071 kb on - strand, within ECD_03630 at 3819.155 kb on + strand, within ECD_03630 at 3819.156 kb on - strand, within ECD_03630 at 3819.211 kb on + strand, within ECD_03630 at 3819.211 kb on + strand, within ECD_03630 at 3819.211 kb on + strand, within ECD_03630 at 3819.229 kb on - strand, within ECD_03630 at 3819.260 kb on + strand, within ECD_03630 at 3819.261 kb on - strand, within ECD_03630 at 3819.261 kb on - strand, within ECD_03630 at 3819.360 kb on + strand, within ECD_03630 at 3819.361 kb on - strand, within ECD_03630 at 3819.361 kb on - strand, within ECD_03630 at 3819.392 kb on + strand, within ECD_03630 at 3819.392 kb on + strand, within ECD_03630 at 3819.394 kb on + strand, within ECD_03630 at 3819.394 kb on + strand, within ECD_03630 at 3819.394 kb on + strand, within ECD_03630 at 3819.394 kb on + strand, within ECD_03630 at 3819.395 kb on - strand, within ECD_03630
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 3,815,968 + -0.8 3,815,968 + +1.1 3,815,991 + -0.0 3,815,991 + -0.4 3,815,991 + +0.3 3,816,093 + ECD_03628 0.14 +0.7 3,816,197 + ECD_03628 0.24 +0.1 3,816,293 - ECD_03628 0.34 -0.3 3,816,320 + ECD_03628 0.37 -1.2 3,816,388 - ECD_03628 0.44 +0.4 3,816,458 + ECD_03628 0.51 +0.8 3,816,458 + ECD_03628 0.51 +2.2 3,816,473 + ECD_03628 0.52 +0.4 3,816,473 + ECD_03628 0.52 -0.5 3,816,543 - ECD_03628 0.59 +1.0 3,816,607 + ECD_03628 0.66 -0.3 3,816,660 + ECD_03628 0.71 +0.7 3,816,906 - +2.1 3,816,906 - +0.2 3,816,947 - -0.3 3,816,947 - -0.8 3,816,949 + +0.2 3,816,949 + -0.4 3,816,950 - +1.9 3,817,010 - -1.5 3,817,296 + ECD_03629 0.24 -0.6 3,817,324 + ECD_03629 0.26 -1.4 3,817,324 + ECD_03629 0.26 +0.0 3,817,324 + ECD_03629 0.26 -0.6 3,817,325 - ECD_03629 0.26 -2.0 3,817,325 - ECD_03629 0.26 -0.2 3,817,327 + ECD_03629 0.26 -0.1 3,817,327 + ECD_03629 0.26 -1.4 3,817,327 + ECD_03629 0.26 -0.4 3,817,327 + ECD_03629 0.26 -0.9 3,817,328 - ECD_03629 0.26 -0.2 3,817,328 - ECD_03629 0.26 +0.1 3,817,328 - ECD_03629 0.26 +0.2 3,817,328 - ECD_03629 0.26 +0.6 3,817,328 - ECD_03629 0.26 -0.5 3,817,329 + ECD_03629 0.26 -0.1 3,817,329 + ECD_03629 0.26 -1.8 3,817,329 + ECD_03629 0.26 -0.5 3,817,329 + ECD_03629 0.26 -1.5 3,817,329 + ECD_03629 0.26 +1.0 3,817,329 + ECD_03629 0.26 -0.2 3,817,330 - ECD_03629 0.26 -1.0 3,817,438 + ECD_03629 0.33 -0.3 3,817,464 + ECD_03629 0.35 -0.8 3,817,465 - ECD_03629 0.35 +0.2 3,817,471 + ECD_03629 0.36 +0.3 3,817,472 - ECD_03629 0.36 -2.8 3,817,475 + ECD_03629 0.36 -1.0 3,817,475 + ECD_03629 0.36 -0.5 3,817,475 + ECD_03629 0.36 +1.0 3,817,475 + ECD_03629 0.36 -3.8 3,817,476 - ECD_03629 0.36 -1.3 3,817,476 - ECD_03629 0.36 +0.5 3,817,476 - ECD_03629 0.36 +0.3 3,817,476 - ECD_03629 0.36 -0.8 3,817,528 - ECD_03629 0.40 +0.2 3,817,589 + ECD_03629 0.44 -3.8 3,817,590 - ECD_03629 0.44 -0.7 3,817,619 + ECD_03629 0.46 -0.7 3,817,624 + ECD_03629 0.46 -0.5 3,817,625 - ECD_03629 0.46 -2.6 3,817,819 - ECD_03629 0.60 +2.1 3,817,819 - ECD_03629 0.60 -0.5 3,817,849 + ECD_03629 0.62 -0.9 3,817,879 + ECD_03629 0.64 -0.2 3,817,880 - ECD_03629 0.64 -0.4 3,817,880 - ECD_03629 0.64 -1.4 3,817,937 + ECD_03629 0.68 -0.6 3,817,937 + ECD_03629 0.68 +0.1 3,817,937 + ECD_03629 0.68 -0.8 3,817,938 - ECD_03629 0.68 +0.4 3,817,961 + ECD_03629 0.69 +0.7 3,817,961 + ECD_03629 0.69 -1.6 3,817,962 - ECD_03629 0.69 +0.4 3,817,964 + ECD_03629 0.70 -0.0 3,817,964 + ECD_03629 0.70 +0.3 3,817,964 + ECD_03629 0.70 +1.2 3,817,965 - ECD_03629 0.70 -0.7 3,817,965 - ECD_03629 0.70 +0.5 3,817,976 + ECD_03629 0.70 -0.1 3,818,004 - ECD_03629 0.72 +0.3 3,818,004 - ECD_03629 0.72 -0.1 3,818,056 + ECD_03629 0.76 -0.0 3,818,057 - ECD_03629 0.76 +0.4 3,818,111 + ECD_03629 0.80 -1.2 3,818,129 + ECD_03629 0.81 +0.1 3,818,175 + ECD_03629 0.84 -0.1 3,818,175 + ECD_03629 0.84 +0.1 3,818,176 - ECD_03629 0.84 -0.9 3,818,176 - ECD_03629 0.84 -2.6 3,818,176 - ECD_03629 0.84 +0.6 3,818,383 + +0.5 3,818,384 - +0.4 3,818,384 - +0.5 3,818,440 + -0.0 3,818,440 + +1.1 3,818,441 - -0.4 3,818,461 + +1.3 3,818,461 + -2.2 3,818,520 + -0.1 3,818,521 - +0.3 3,818,557 + ECD_03630 0.11 +1.6 3,818,557 + ECD_03630 0.11 -0.7 3,818,614 + ECD_03630 0.14 -1.7 3,818,615 - ECD_03630 0.14 +0.4 3,818,620 + ECD_03630 0.15 -0.4 3,818,620 + ECD_03630 0.15 -2.3 3,818,620 + ECD_03630 0.15 -1.6 3,818,620 + ECD_03630 0.15 -0.0 3,818,621 - ECD_03630 0.15 -0.4 3,818,630 - ECD_03630 0.15 -0.1 3,818,719 - ECD_03630 0.21 +0.2 3,818,772 + ECD_03630 0.25 +0.6 3,818,772 + ECD_03630 0.25 +0.3 3,818,772 + ECD_03630 0.25 +0.8 3,818,773 - ECD_03630 0.25 -0.4 3,818,824 - ECD_03630 0.28 +0.5 3,818,995 + ECD_03630 0.40 -0.4 3,819,038 + ECD_03630 0.43 -0.7 3,819,039 - ECD_03630 0.43 -0.3 3,819,071 - ECD_03630 0.45 -1.6 3,819,155 + ECD_03630 0.51 -1.4 3,819,156 - ECD_03630 0.51 +0.0 3,819,211 + ECD_03630 0.54 -1.0 3,819,211 + ECD_03630 0.54 +0.3 3,819,211 + ECD_03630 0.54 +0.6 3,819,229 - ECD_03630 0.56 +2.0 3,819,260 + ECD_03630 0.58 +0.9 3,819,261 - ECD_03630 0.58 -1.8 3,819,261 - ECD_03630 0.58 -3.7 3,819,360 + ECD_03630 0.64 +0.1 3,819,361 - ECD_03630 0.64 -0.4 3,819,361 - ECD_03630 0.64 -1.5 3,819,392 + ECD_03630 0.66 -0.0 3,819,392 + ECD_03630 0.66 -0.6 3,819,394 + ECD_03630 0.67 -1.0 3,819,394 + ECD_03630 0.67 -2.2 3,819,394 + ECD_03630 0.67 +0.4 3,819,394 + ECD_03630 0.67 -1.5 3,819,395 - ECD_03630 0.67 +0.7
Or see this region's nucleotide sequence