Strain Fitness in Escherichia coli BL21 around ECD_03629

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03628 and ECD_03629 are separated by 4 nucleotidesECD_03629 and ECD_03630 overlap by 7 nucleotides ECD_03628: ECD_03628 - asparagine synthetase A, at 3,815,956 to 3,816,948 _03628 ECD_03629: ECD_03629 - stimulator of RavA ATPase activity; von Willebrand factor domain protein, at 3,816,953 to 3,818,404 _03629 ECD_03630: ECD_03630 - hexameric AAA+ MoxR family ATPase, putative molecular chaperone, at 3,818,398 to 3,819,894 _03630 Position (kb) 3816 3817 3818 3819Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 3815.968 kb on + strandat 3815.968 kb on + strandat 3815.991 kb on + strandat 3815.991 kb on + strandat 3815.991 kb on + strandat 3816.093 kb on + strand, within ECD_03628at 3816.197 kb on + strand, within ECD_03628at 3816.293 kb on - strand, within ECD_03628at 3816.320 kb on + strand, within ECD_03628at 3816.388 kb on - strand, within ECD_03628at 3816.458 kb on + strand, within ECD_03628at 3816.458 kb on + strand, within ECD_03628at 3816.473 kb on + strand, within ECD_03628at 3816.473 kb on + strand, within ECD_03628at 3816.543 kb on - strand, within ECD_03628at 3816.607 kb on + strand, within ECD_03628at 3816.660 kb on + strand, within ECD_03628at 3816.906 kb on - strandat 3816.906 kb on - strandat 3816.947 kb on - strandat 3816.947 kb on - strandat 3816.949 kb on + strandat 3816.949 kb on + strandat 3816.950 kb on - strandat 3817.010 kb on - strandat 3817.296 kb on + strand, within ECD_03629at 3817.324 kb on + strand, within ECD_03629at 3817.324 kb on + strand, within ECD_03629at 3817.324 kb on + strand, within ECD_03629at 3817.325 kb on - strand, within ECD_03629at 3817.325 kb on - strand, within ECD_03629at 3817.327 kb on + strand, within ECD_03629at 3817.327 kb on + strand, within ECD_03629at 3817.327 kb on + strand, within ECD_03629at 3817.327 kb on + strand, within ECD_03629at 3817.328 kb on - strand, within ECD_03629at 3817.328 kb on - strand, within ECD_03629at 3817.328 kb on - strand, within ECD_03629at 3817.328 kb on - strand, within ECD_03629at 3817.328 kb on - strand, within ECD_03629at 3817.329 kb on + strand, within ECD_03629at 3817.329 kb on + strand, within ECD_03629at 3817.329 kb on + strand, within ECD_03629at 3817.329 kb on + strand, within ECD_03629at 3817.329 kb on + strand, within ECD_03629at 3817.329 kb on + strand, within ECD_03629at 3817.330 kb on - strand, within ECD_03629at 3817.438 kb on + strand, within ECD_03629at 3817.464 kb on + strand, within ECD_03629at 3817.465 kb on - strand, within ECD_03629at 3817.471 kb on + strand, within ECD_03629at 3817.472 kb on - strand, within ECD_03629at 3817.475 kb on + strand, within ECD_03629at 3817.475 kb on + strand, within ECD_03629at 3817.475 kb on + strand, within ECD_03629at 3817.475 kb on + strand, within ECD_03629at 3817.476 kb on - strand, within ECD_03629at 3817.476 kb on - strand, within ECD_03629at 3817.476 kb on - strand, within ECD_03629at 3817.476 kb on - strand, within ECD_03629at 3817.528 kb on - strand, within ECD_03629at 3817.589 kb on + strand, within ECD_03629at 3817.590 kb on - strand, within ECD_03629at 3817.619 kb on + strand, within ECD_03629at 3817.624 kb on + strand, within ECD_03629at 3817.625 kb on - strand, within ECD_03629at 3817.819 kb on - strand, within ECD_03629at 3817.819 kb on - strand, within ECD_03629at 3817.849 kb on + strand, within ECD_03629at 3817.879 kb on + strand, within ECD_03629at 3817.880 kb on - strand, within ECD_03629at 3817.880 kb on - strand, within ECD_03629at 3817.937 kb on + strand, within ECD_03629at 3817.937 kb on + strand, within ECD_03629at 3817.937 kb on + strand, within ECD_03629at 3817.938 kb on - strand, within ECD_03629at 3817.961 kb on + strand, within ECD_03629at 3817.961 kb on + strand, within ECD_03629at 3817.962 kb on - strand, within ECD_03629at 3817.964 kb on + strand, within ECD_03629at 3817.964 kb on + strand, within ECD_03629at 3817.964 kb on + strand, within ECD_03629at 3817.965 kb on - strand, within ECD_03629at 3817.965 kb on - strand, within ECD_03629at 3817.976 kb on + strand, within ECD_03629at 3818.004 kb on - strand, within ECD_03629at 3818.004 kb on - strand, within ECD_03629at 3818.056 kb on + strand, within ECD_03629at 3818.057 kb on - strand, within ECD_03629at 3818.111 kb on + strand, within ECD_03629at 3818.129 kb on + strand, within ECD_03629at 3818.175 kb on + strand, within ECD_03629at 3818.175 kb on + strand, within ECD_03629at 3818.176 kb on - strand, within ECD_03629at 3818.176 kb on - strand, within ECD_03629at 3818.176 kb on - strand, within ECD_03629at 3818.383 kb on + strandat 3818.384 kb on - strandat 3818.384 kb on - strandat 3818.440 kb on + strandat 3818.440 kb on + strandat 3818.441 kb on - strandat 3818.461 kb on + strandat 3818.461 kb on + strandat 3818.520 kb on + strandat 3818.521 kb on - strandat 3818.557 kb on + strand, within ECD_03630at 3818.557 kb on + strand, within ECD_03630at 3818.614 kb on + strand, within ECD_03630at 3818.615 kb on - strand, within ECD_03630at 3818.620 kb on + strand, within ECD_03630at 3818.620 kb on + strand, within ECD_03630at 3818.620 kb on + strand, within ECD_03630at 3818.620 kb on + strand, within ECD_03630at 3818.621 kb on - strand, within ECD_03630at 3818.630 kb on - strand, within ECD_03630at 3818.719 kb on - strand, within ECD_03630at 3818.772 kb on + strand, within ECD_03630at 3818.772 kb on + strand, within ECD_03630at 3818.772 kb on + strand, within ECD_03630at 3818.773 kb on - strand, within ECD_03630at 3818.824 kb on - strand, within ECD_03630at 3818.995 kb on + strand, within ECD_03630at 3819.038 kb on + strand, within ECD_03630at 3819.039 kb on - strand, within ECD_03630at 3819.071 kb on - strand, within ECD_03630at 3819.155 kb on + strand, within ECD_03630at 3819.156 kb on - strand, within ECD_03630at 3819.211 kb on + strand, within ECD_03630at 3819.211 kb on + strand, within ECD_03630at 3819.211 kb on + strand, within ECD_03630at 3819.229 kb on - strand, within ECD_03630at 3819.260 kb on + strand, within ECD_03630at 3819.261 kb on - strand, within ECD_03630at 3819.261 kb on - strand, within ECD_03630at 3819.360 kb on + strand, within ECD_03630at 3819.361 kb on - strand, within ECD_03630at 3819.361 kb on - strand, within ECD_03630at 3819.392 kb on + strand, within ECD_03630at 3819.392 kb on + strand, within ECD_03630at 3819.394 kb on + strand, within ECD_03630at 3819.394 kb on + strand, within ECD_03630at 3819.394 kb on + strand, within ECD_03630at 3819.394 kb on + strand, within ECD_03630at 3819.395 kb on - strand, within ECD_03630

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,815,968 + -0.8
3,815,968 + +1.1
3,815,991 + -0.0
3,815,991 + -0.4
3,815,991 + +0.3
3,816,093 + ECD_03628 0.14 +0.7
3,816,197 + ECD_03628 0.24 +0.1
3,816,293 - ECD_03628 0.34 -0.3
3,816,320 + ECD_03628 0.37 -1.2
3,816,388 - ECD_03628 0.44 +0.4
3,816,458 + ECD_03628 0.51 +0.8
3,816,458 + ECD_03628 0.51 +2.2
3,816,473 + ECD_03628 0.52 +0.4
3,816,473 + ECD_03628 0.52 -0.5
3,816,543 - ECD_03628 0.59 +1.0
3,816,607 + ECD_03628 0.66 -0.3
3,816,660 + ECD_03628 0.71 +0.7
3,816,906 - +2.1
3,816,906 - +0.2
3,816,947 - -0.3
3,816,947 - -0.8
3,816,949 + +0.2
3,816,949 + -0.4
3,816,950 - +1.9
3,817,010 - -1.5
3,817,296 + ECD_03629 0.24 -0.6
3,817,324 + ECD_03629 0.26 -1.4
3,817,324 + ECD_03629 0.26 +0.0
3,817,324 + ECD_03629 0.26 -0.6
3,817,325 - ECD_03629 0.26 -2.0
3,817,325 - ECD_03629 0.26 -0.2
3,817,327 + ECD_03629 0.26 -0.1
3,817,327 + ECD_03629 0.26 -1.4
3,817,327 + ECD_03629 0.26 -0.4
3,817,327 + ECD_03629 0.26 -0.9
3,817,328 - ECD_03629 0.26 -0.2
3,817,328 - ECD_03629 0.26 +0.1
3,817,328 - ECD_03629 0.26 +0.2
3,817,328 - ECD_03629 0.26 +0.6
3,817,328 - ECD_03629 0.26 -0.5
3,817,329 + ECD_03629 0.26 -0.1
3,817,329 + ECD_03629 0.26 -1.8
3,817,329 + ECD_03629 0.26 -0.5
3,817,329 + ECD_03629 0.26 -1.5
3,817,329 + ECD_03629 0.26 +1.0
3,817,329 + ECD_03629 0.26 -0.2
3,817,330 - ECD_03629 0.26 -1.0
3,817,438 + ECD_03629 0.33 -0.3
3,817,464 + ECD_03629 0.35 -0.8
3,817,465 - ECD_03629 0.35 +0.2
3,817,471 + ECD_03629 0.36 +0.3
3,817,472 - ECD_03629 0.36 -2.8
3,817,475 + ECD_03629 0.36 -1.0
3,817,475 + ECD_03629 0.36 -0.5
3,817,475 + ECD_03629 0.36 +1.0
3,817,475 + ECD_03629 0.36 -3.8
3,817,476 - ECD_03629 0.36 -1.3
3,817,476 - ECD_03629 0.36 +0.5
3,817,476 - ECD_03629 0.36 +0.3
3,817,476 - ECD_03629 0.36 -0.8
3,817,528 - ECD_03629 0.40 +0.2
3,817,589 + ECD_03629 0.44 -3.8
3,817,590 - ECD_03629 0.44 -0.7
3,817,619 + ECD_03629 0.46 -0.7
3,817,624 + ECD_03629 0.46 -0.5
3,817,625 - ECD_03629 0.46 -2.6
3,817,819 - ECD_03629 0.60 +2.1
3,817,819 - ECD_03629 0.60 -0.5
3,817,849 + ECD_03629 0.62 -0.9
3,817,879 + ECD_03629 0.64 -0.2
3,817,880 - ECD_03629 0.64 -0.4
3,817,880 - ECD_03629 0.64 -1.4
3,817,937 + ECD_03629 0.68 -0.6
3,817,937 + ECD_03629 0.68 +0.1
3,817,937 + ECD_03629 0.68 -0.8
3,817,938 - ECD_03629 0.68 +0.4
3,817,961 + ECD_03629 0.69 +0.7
3,817,961 + ECD_03629 0.69 -1.6
3,817,962 - ECD_03629 0.69 +0.4
3,817,964 + ECD_03629 0.70 -0.0
3,817,964 + ECD_03629 0.70 +0.3
3,817,964 + ECD_03629 0.70 +1.2
3,817,965 - ECD_03629 0.70 -0.7
3,817,965 - ECD_03629 0.70 +0.5
3,817,976 + ECD_03629 0.70 -0.1
3,818,004 - ECD_03629 0.72 +0.3
3,818,004 - ECD_03629 0.72 -0.1
3,818,056 + ECD_03629 0.76 -0.0
3,818,057 - ECD_03629 0.76 +0.4
3,818,111 + ECD_03629 0.80 -1.2
3,818,129 + ECD_03629 0.81 +0.1
3,818,175 + ECD_03629 0.84 -0.1
3,818,175 + ECD_03629 0.84 +0.1
3,818,176 - ECD_03629 0.84 -0.9
3,818,176 - ECD_03629 0.84 -2.6
3,818,176 - ECD_03629 0.84 +0.6
3,818,383 + +0.5
3,818,384 - +0.4
3,818,384 - +0.5
3,818,440 + -0.0
3,818,440 + +1.1
3,818,441 - -0.4
3,818,461 + +1.3
3,818,461 + -2.2
3,818,520 + -0.1
3,818,521 - +0.3
3,818,557 + ECD_03630 0.11 +1.6
3,818,557 + ECD_03630 0.11 -0.7
3,818,614 + ECD_03630 0.14 -1.7
3,818,615 - ECD_03630 0.14 +0.4
3,818,620 + ECD_03630 0.15 -0.4
3,818,620 + ECD_03630 0.15 -2.3
3,818,620 + ECD_03630 0.15 -1.6
3,818,620 + ECD_03630 0.15 -0.0
3,818,621 - ECD_03630 0.15 -0.4
3,818,630 - ECD_03630 0.15 -0.1
3,818,719 - ECD_03630 0.21 +0.2
3,818,772 + ECD_03630 0.25 +0.6
3,818,772 + ECD_03630 0.25 +0.3
3,818,772 + ECD_03630 0.25 +0.8
3,818,773 - ECD_03630 0.25 -0.4
3,818,824 - ECD_03630 0.28 +0.5
3,818,995 + ECD_03630 0.40 -0.4
3,819,038 + ECD_03630 0.43 -0.7
3,819,039 - ECD_03630 0.43 -0.3
3,819,071 - ECD_03630 0.45 -1.6
3,819,155 + ECD_03630 0.51 -1.4
3,819,156 - ECD_03630 0.51 +0.0
3,819,211 + ECD_03630 0.54 -1.0
3,819,211 + ECD_03630 0.54 +0.3
3,819,211 + ECD_03630 0.54 +0.6
3,819,229 - ECD_03630 0.56 +2.0
3,819,260 + ECD_03630 0.58 +0.9
3,819,261 - ECD_03630 0.58 -1.8
3,819,261 - ECD_03630 0.58 -3.7
3,819,360 + ECD_03630 0.64 +0.1
3,819,361 - ECD_03630 0.64 -0.4
3,819,361 - ECD_03630 0.64 -1.5
3,819,392 + ECD_03630 0.66 -0.0
3,819,392 + ECD_03630 0.66 -0.6
3,819,394 + ECD_03630 0.67 -1.0
3,819,394 + ECD_03630 0.67 -2.2
3,819,394 + ECD_03630 0.67 +0.4
3,819,394 + ECD_03630 0.67 -1.5
3,819,395 - ECD_03630 0.67 +0.7

Or see this region's nucleotide sequence