Strain Fitness in Escherichia coli BL21 around ECD_03606

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03605 and ECD_03606 are separated by 18 nucleotidesECD_03606 and ECD_03607 are separated by 132 nucleotides ECD_03605: ECD_03605 - cryptic phospho-beta-glucosidase B, at 3,791,110 to 3,792,504 _03605 ECD_03606: ECD_03606 - fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component, at 3,792,523 to 3,794,400 _03606 ECD_03607: ECD_03607 - transcriptional antiterminator of the bgl operon, at 3,794,533 to 3,795,369 _03607 Position (kb) 3792 3793 3794 3795Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3791.572 kb on - strand, within ECD_03605at 3791.607 kb on - strand, within ECD_03605at 3791.629 kb on + strand, within ECD_03605at 3791.679 kb on + strand, within ECD_03605at 3791.706 kb on + strand, within ECD_03605at 3791.706 kb on + strand, within ECD_03605at 3791.706 kb on + strand, within ECD_03605at 3791.785 kb on - strand, within ECD_03605at 3791.832 kb on + strand, within ECD_03605at 3791.862 kb on + strand, within ECD_03605at 3791.863 kb on - strand, within ECD_03605at 3791.874 kb on + strand, within ECD_03605at 3791.874 kb on + strand, within ECD_03605at 3791.874 kb on + strand, within ECD_03605at 3791.983 kb on - strand, within ECD_03605at 3792.007 kb on + strand, within ECD_03605at 3792.014 kb on - strand, within ECD_03605at 3792.018 kb on + strand, within ECD_03605at 3792.018 kb on + strand, within ECD_03605at 3792.019 kb on - strand, within ECD_03605at 3792.019 kb on - strand, within ECD_03605at 3792.019 kb on - strand, within ECD_03605at 3792.033 kb on + strand, within ECD_03605at 3792.050 kb on + strand, within ECD_03605at 3792.140 kb on - strand, within ECD_03605at 3792.345 kb on + strand, within ECD_03605at 3792.346 kb on - strand, within ECD_03605at 3792.346 kb on - strand, within ECD_03605at 3792.400 kb on + strandat 3792.414 kb on + strandat 3792.415 kb on - strandat 3792.504 kb on + strandat 3792.504 kb on + strandat 3792.519 kb on - strandat 3792.560 kb on - strandat 3792.560 kb on - strandat 3792.583 kb on + strandat 3792.584 kb on - strandat 3792.584 kb on - strandat 3792.584 kb on - strandat 3792.584 kb on - strandat 3792.584 kb on - strandat 3792.584 kb on - strandat 3792.584 kb on - strandat 3792.592 kb on - strandat 3792.604 kb on - strandat 3792.614 kb on - strandat 3792.614 kb on - strandat 3792.614 kb on - strandat 3792.617 kb on - strandat 3792.688 kb on - strandat 3792.808 kb on + strand, within ECD_03606at 3792.808 kb on + strand, within ECD_03606at 3792.809 kb on - strand, within ECD_03606at 3792.809 kb on - strand, within ECD_03606at 3792.809 kb on - strand, within ECD_03606at 3792.882 kb on + strand, within ECD_03606at 3792.883 kb on - strand, within ECD_03606at 3792.915 kb on + strand, within ECD_03606at 3792.966 kb on + strand, within ECD_03606at 3792.987 kb on + strand, within ECD_03606at 3792.987 kb on + strand, within ECD_03606at 3792.988 kb on - strand, within ECD_03606at 3792.988 kb on - strand, within ECD_03606at 3792.988 kb on - strand, within ECD_03606at 3792.988 kb on - strand, within ECD_03606at 3793.240 kb on - strand, within ECD_03606at 3793.260 kb on - strand, within ECD_03606at 3793.260 kb on - strand, within ECD_03606at 3793.260 kb on - strand, within ECD_03606at 3793.263 kb on + strand, within ECD_03606at 3793.264 kb on - strand, within ECD_03606at 3793.283 kb on + strand, within ECD_03606at 3793.284 kb on - strand, within ECD_03606at 3793.284 kb on - strand, within ECD_03606at 3793.285 kb on + strand, within ECD_03606at 3793.285 kb on + strand, within ECD_03606at 3793.285 kb on + strand, within ECD_03606at 3793.285 kb on + strand, within ECD_03606at 3793.285 kb on + strand, within ECD_03606at 3793.285 kb on + strand, within ECD_03606at 3793.285 kb on + strand, within ECD_03606at 3793.285 kb on + strand, within ECD_03606at 3793.286 kb on - strand, within ECD_03606at 3793.303 kb on - strand, within ECD_03606at 3793.456 kb on - strand, within ECD_03606at 3793.456 kb on - strand, within ECD_03606at 3793.456 kb on - strand, within ECD_03606at 3793.461 kb on + strand, within ECD_03606at 3793.651 kb on + strand, within ECD_03606at 3793.652 kb on - strand, within ECD_03606at 3793.652 kb on - strand, within ECD_03606at 3793.749 kb on + strand, within ECD_03606at 3793.764 kb on - strand, within ECD_03606at 3793.846 kb on + strand, within ECD_03606at 3793.885 kb on - strand, within ECD_03606at 3793.920 kb on - strand, within ECD_03606at 3793.975 kb on + strand, within ECD_03606at 3793.976 kb on - strand, within ECD_03606at 3793.979 kb on + strand, within ECD_03606at 3793.979 kb on + strand, within ECD_03606at 3794.031 kb on + strand, within ECD_03606at 3794.032 kb on - strand, within ECD_03606at 3794.032 kb on - strand, within ECD_03606at 3794.032 kb on - strand, within ECD_03606at 3794.208 kb on + strand, within ECD_03606at 3794.209 kb on - strand, within ECD_03606at 3794.212 kb on + strand, within ECD_03606at 3794.212 kb on + strand, within ECD_03606at 3794.213 kb on - strandat 3794.213 kb on - strandat 3794.213 kb on - strandat 3794.213 kb on - strandat 3794.251 kb on - strandat 3794.353 kb on - strandat 3794.400 kb on + strandat 3794.400 kb on + strandat 3794.833 kb on + strand, within ECD_03607at 3795.031 kb on + strand, within ECD_03607at 3795.031 kb on + strand, within ECD_03607at 3795.032 kb on - strand, within ECD_03607at 3795.051 kb on + strand, within ECD_03607at 3795.087 kb on - strand, within ECD_03607at 3795.091 kb on - strand, within ECD_03607at 3795.091 kb on - strand, within ECD_03607at 3795.132 kb on + strand, within ECD_03607at 3795.133 kb on - strand, within ECD_03607at 3795.135 kb on + strand, within ECD_03607at 3795.136 kb on - strand, within ECD_03607at 3795.168 kb on + strand, within ECD_03607at 3795.169 kb on - strand, within ECD_03607

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,791,572 - ECD_03605 0.33 -0.7
3,791,607 - ECD_03605 0.36 -1.9
3,791,629 + ECD_03605 0.37 -0.8
3,791,679 + ECD_03605 0.41 -0.4
3,791,706 + ECD_03605 0.43 +0.1
3,791,706 + ECD_03605 0.43 +0.6
3,791,706 + ECD_03605 0.43 -0.3
3,791,785 - ECD_03605 0.48 -1.4
3,791,832 + ECD_03605 0.52 -0.9
3,791,862 + ECD_03605 0.54 -1.3
3,791,863 - ECD_03605 0.54 -0.4
3,791,874 + ECD_03605 0.55 +0.7
3,791,874 + ECD_03605 0.55 -0.8
3,791,874 + ECD_03605 0.55 -0.7
3,791,983 - ECD_03605 0.63 +1.9
3,792,007 + ECD_03605 0.64 +0.2
3,792,014 - ECD_03605 0.65 -0.7
3,792,018 + ECD_03605 0.65 -1.3
3,792,018 + ECD_03605 0.65 -2.2
3,792,019 - ECD_03605 0.65 -0.3
3,792,019 - ECD_03605 0.65 +0.3
3,792,019 - ECD_03605 0.65 +0.7
3,792,033 + ECD_03605 0.66 +0.8
3,792,050 + ECD_03605 0.67 +0.9
3,792,140 - ECD_03605 0.74 -0.9
3,792,345 + ECD_03605 0.89 -0.1
3,792,346 - ECD_03605 0.89 -0.1
3,792,346 - ECD_03605 0.89 +0.3
3,792,400 + -1.9
3,792,414 + -2.6
3,792,415 - +0.5
3,792,504 + -2.1
3,792,504 + -1.2
3,792,519 - -0.8
3,792,560 - -1.8
3,792,560 - -0.1
3,792,583 + -2.8
3,792,584 - -2.9
3,792,584 - +0.5
3,792,584 - +0.5
3,792,584 - -0.0
3,792,584 - +2.3
3,792,584 - +0.7
3,792,584 - +1.2
3,792,592 - +0.1
3,792,604 - -0.4
3,792,614 - +1.2
3,792,614 - -1.9
3,792,614 - -0.8
3,792,617 - -0.3
3,792,688 - +0.1
3,792,808 + ECD_03606 0.15 +0.7
3,792,808 + ECD_03606 0.15 +0.3
3,792,809 - ECD_03606 0.15 -0.2
3,792,809 - ECD_03606 0.15 +1.0
3,792,809 - ECD_03606 0.15 +2.3
3,792,882 + ECD_03606 0.19 +0.4
3,792,883 - ECD_03606 0.19 -0.4
3,792,915 + ECD_03606 0.21 -1.4
3,792,966 + ECD_03606 0.24 -0.2
3,792,987 + ECD_03606 0.25 -0.2
3,792,987 + ECD_03606 0.25 +0.6
3,792,988 - ECD_03606 0.25 -1.2
3,792,988 - ECD_03606 0.25 +0.4
3,792,988 - ECD_03606 0.25 -0.1
3,792,988 - ECD_03606 0.25 +1.0
3,793,240 - ECD_03606 0.38 -1.9
3,793,260 - ECD_03606 0.39 -0.4
3,793,260 - ECD_03606 0.39 +1.1
3,793,260 - ECD_03606 0.39 -0.8
3,793,263 + ECD_03606 0.39 +0.8
3,793,264 - ECD_03606 0.39 -2.1
3,793,283 + ECD_03606 0.40 +0.4
3,793,284 - ECD_03606 0.41 +0.9
3,793,284 - ECD_03606 0.41 +1.4
3,793,285 + ECD_03606 0.41 -0.2
3,793,285 + ECD_03606 0.41 +1.5
3,793,285 + ECD_03606 0.41 +0.8
3,793,285 + ECD_03606 0.41 +1.0
3,793,285 + ECD_03606 0.41 +0.6
3,793,285 + ECD_03606 0.41 +0.0
3,793,285 + ECD_03606 0.41 +0.9
3,793,285 + ECD_03606 0.41 -1.5
3,793,286 - ECD_03606 0.41 -0.1
3,793,303 - ECD_03606 0.42 -1.3
3,793,456 - ECD_03606 0.50 -2.3
3,793,456 - ECD_03606 0.50 +0.3
3,793,456 - ECD_03606 0.50 -2.2
3,793,461 + ECD_03606 0.50 -1.1
3,793,651 + ECD_03606 0.60 -0.5
3,793,652 - ECD_03606 0.60 -0.7
3,793,652 - ECD_03606 0.60 -0.9
3,793,749 + ECD_03606 0.65 +0.9
3,793,764 - ECD_03606 0.66 -2.1
3,793,846 + ECD_03606 0.70 +0.6
3,793,885 - ECD_03606 0.73 +0.2
3,793,920 - ECD_03606 0.74 -0.1
3,793,975 + ECD_03606 0.77 -0.3
3,793,976 - ECD_03606 0.77 -0.3
3,793,979 + ECD_03606 0.78 -1.4
3,793,979 + ECD_03606 0.78 -0.5
3,794,031 + ECD_03606 0.80 -0.6
3,794,032 - ECD_03606 0.80 -0.5
3,794,032 - ECD_03606 0.80 -1.8
3,794,032 - ECD_03606 0.80 +0.7
3,794,208 + ECD_03606 0.90 +0.5
3,794,209 - ECD_03606 0.90 +0.9
3,794,212 + ECD_03606 0.90 -0.3
3,794,212 + ECD_03606 0.90 -1.1
3,794,213 - +0.4
3,794,213 - -0.1
3,794,213 - -2.5
3,794,213 - +1.6
3,794,251 - -0.2
3,794,353 - -1.2
3,794,400 + -0.5
3,794,400 + -1.2
3,794,833 + ECD_03607 0.36 -0.2
3,795,031 + ECD_03607 0.59 -0.0
3,795,031 + ECD_03607 0.59 -0.2
3,795,032 - ECD_03607 0.60 -2.0
3,795,051 + ECD_03607 0.62 -0.3
3,795,087 - ECD_03607 0.66 -1.1
3,795,091 - ECD_03607 0.67 -1.0
3,795,091 - ECD_03607 0.67 -1.4
3,795,132 + ECD_03607 0.72 -0.4
3,795,133 - ECD_03607 0.72 -1.4
3,795,135 + ECD_03607 0.72 -0.8
3,795,136 - ECD_03607 0.72 -0.2
3,795,168 + ECD_03607 0.76 -0.6
3,795,169 - ECD_03607 0.76 -2.6

Or see this region's nucleotide sequence