Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03605 and ECD_03606 are separated by 18 nucleotides ECD_03606 and ECD_03607 are separated by 132 nucleotides
ECD_03605: ECD_03605 - cryptic phospho-beta-glucosidase B, at 3,791,110 to 3,792,504
_03605
ECD_03606: ECD_03606 - fused beta-glucoside-specific PTS enzymes: IIA component/IIB component/IIC component, at 3,792,523 to 3,794,400
_03606
ECD_03607: ECD_03607 - transcriptional antiterminator of the bgl operon, at 3,794,533 to 3,795,369
_03607
Position (kb)
3792
3793
3794
3795 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3791.572 kb on - strand, within ECD_03605 at 3791.607 kb on - strand, within ECD_03605 at 3791.629 kb on + strand, within ECD_03605 at 3791.679 kb on + strand, within ECD_03605 at 3791.706 kb on + strand, within ECD_03605 at 3791.706 kb on + strand, within ECD_03605 at 3791.706 kb on + strand, within ECD_03605 at 3791.785 kb on - strand, within ECD_03605 at 3791.832 kb on + strand, within ECD_03605 at 3791.862 kb on + strand, within ECD_03605 at 3791.863 kb on - strand, within ECD_03605 at 3791.874 kb on + strand, within ECD_03605 at 3791.874 kb on + strand, within ECD_03605 at 3791.874 kb on + strand, within ECD_03605 at 3791.983 kb on - strand, within ECD_03605 at 3792.007 kb on + strand, within ECD_03605 at 3792.014 kb on - strand, within ECD_03605 at 3792.018 kb on + strand, within ECD_03605 at 3792.018 kb on + strand, within ECD_03605 at 3792.019 kb on - strand, within ECD_03605 at 3792.019 kb on - strand, within ECD_03605 at 3792.019 kb on - strand, within ECD_03605 at 3792.033 kb on + strand, within ECD_03605 at 3792.050 kb on + strand, within ECD_03605 at 3792.140 kb on - strand, within ECD_03605 at 3792.345 kb on + strand, within ECD_03605 at 3792.346 kb on - strand, within ECD_03605 at 3792.346 kb on - strand, within ECD_03605 at 3792.400 kb on + strand at 3792.414 kb on + strand at 3792.415 kb on - strand at 3792.504 kb on + strand at 3792.504 kb on + strand at 3792.519 kb on - strand at 3792.560 kb on - strand at 3792.560 kb on - strand at 3792.583 kb on + strand at 3792.584 kb on - strand at 3792.584 kb on - strand at 3792.584 kb on - strand at 3792.584 kb on - strand at 3792.584 kb on - strand at 3792.584 kb on - strand at 3792.584 kb on - strand at 3792.592 kb on - strand at 3792.604 kb on - strand at 3792.614 kb on - strand at 3792.614 kb on - strand at 3792.614 kb on - strand at 3792.617 kb on - strand at 3792.688 kb on - strand at 3792.808 kb on + strand, within ECD_03606 at 3792.808 kb on + strand, within ECD_03606 at 3792.809 kb on - strand, within ECD_03606 at 3792.809 kb on - strand, within ECD_03606 at 3792.809 kb on - strand, within ECD_03606 at 3792.882 kb on + strand, within ECD_03606 at 3792.883 kb on - strand, within ECD_03606 at 3792.915 kb on + strand, within ECD_03606 at 3792.966 kb on + strand, within ECD_03606 at 3792.987 kb on + strand, within ECD_03606 at 3792.987 kb on + strand, within ECD_03606 at 3792.988 kb on - strand, within ECD_03606 at 3792.988 kb on - strand, within ECD_03606 at 3792.988 kb on - strand, within ECD_03606 at 3792.988 kb on - strand, within ECD_03606 at 3793.240 kb on - strand, within ECD_03606 at 3793.260 kb on - strand, within ECD_03606 at 3793.260 kb on - strand, within ECD_03606 at 3793.260 kb on - strand, within ECD_03606 at 3793.263 kb on + strand, within ECD_03606 at 3793.264 kb on - strand, within ECD_03606 at 3793.283 kb on + strand, within ECD_03606 at 3793.284 kb on - strand, within ECD_03606 at 3793.284 kb on - strand, within ECD_03606 at 3793.285 kb on + strand, within ECD_03606 at 3793.285 kb on + strand, within ECD_03606 at 3793.285 kb on + strand, within ECD_03606 at 3793.285 kb on + strand, within ECD_03606 at 3793.285 kb on + strand, within ECD_03606 at 3793.285 kb on + strand, within ECD_03606 at 3793.285 kb on + strand, within ECD_03606 at 3793.285 kb on + strand, within ECD_03606 at 3793.286 kb on - strand, within ECD_03606 at 3793.303 kb on - strand, within ECD_03606 at 3793.456 kb on - strand, within ECD_03606 at 3793.456 kb on - strand, within ECD_03606 at 3793.456 kb on - strand, within ECD_03606 at 3793.461 kb on + strand, within ECD_03606 at 3793.651 kb on + strand, within ECD_03606 at 3793.652 kb on - strand, within ECD_03606 at 3793.652 kb on - strand, within ECD_03606 at 3793.749 kb on + strand, within ECD_03606 at 3793.764 kb on - strand, within ECD_03606 at 3793.846 kb on + strand, within ECD_03606 at 3793.885 kb on - strand, within ECD_03606 at 3793.920 kb on - strand, within ECD_03606 at 3793.975 kb on + strand, within ECD_03606 at 3793.976 kb on - strand, within ECD_03606 at 3793.979 kb on + strand, within ECD_03606 at 3793.979 kb on + strand, within ECD_03606 at 3794.031 kb on + strand, within ECD_03606 at 3794.032 kb on - strand, within ECD_03606 at 3794.032 kb on - strand, within ECD_03606 at 3794.032 kb on - strand, within ECD_03606 at 3794.208 kb on + strand, within ECD_03606 at 3794.209 kb on - strand, within ECD_03606 at 3794.212 kb on + strand, within ECD_03606 at 3794.212 kb on + strand, within ECD_03606 at 3794.213 kb on - strand at 3794.213 kb on - strand at 3794.213 kb on - strand at 3794.213 kb on - strand at 3794.251 kb on - strand at 3794.353 kb on - strand at 3794.400 kb on + strand at 3794.400 kb on + strand at 3794.833 kb on + strand, within ECD_03607 at 3795.031 kb on + strand, within ECD_03607 at 3795.031 kb on + strand, within ECD_03607 at 3795.032 kb on - strand, within ECD_03607 at 3795.051 kb on + strand, within ECD_03607 at 3795.087 kb on - strand, within ECD_03607 at 3795.091 kb on - strand, within ECD_03607 at 3795.091 kb on - strand, within ECD_03607 at 3795.132 kb on + strand, within ECD_03607 at 3795.133 kb on - strand, within ECD_03607 at 3795.135 kb on + strand, within ECD_03607 at 3795.136 kb on - strand, within ECD_03607 at 3795.168 kb on + strand, within ECD_03607 at 3795.169 kb on - strand, within ECD_03607
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 3,791,572 - ECD_03605 0.33 -0.7 3,791,607 - ECD_03605 0.36 -1.9 3,791,629 + ECD_03605 0.37 -0.8 3,791,679 + ECD_03605 0.41 -0.4 3,791,706 + ECD_03605 0.43 +0.1 3,791,706 + ECD_03605 0.43 +0.6 3,791,706 + ECD_03605 0.43 -0.3 3,791,785 - ECD_03605 0.48 -1.4 3,791,832 + ECD_03605 0.52 -0.9 3,791,862 + ECD_03605 0.54 -1.3 3,791,863 - ECD_03605 0.54 -0.4 3,791,874 + ECD_03605 0.55 +0.7 3,791,874 + ECD_03605 0.55 -0.8 3,791,874 + ECD_03605 0.55 -0.7 3,791,983 - ECD_03605 0.63 +1.9 3,792,007 + ECD_03605 0.64 +0.2 3,792,014 - ECD_03605 0.65 -0.7 3,792,018 + ECD_03605 0.65 -1.3 3,792,018 + ECD_03605 0.65 -2.2 3,792,019 - ECD_03605 0.65 -0.3 3,792,019 - ECD_03605 0.65 +0.3 3,792,019 - ECD_03605 0.65 +0.7 3,792,033 + ECD_03605 0.66 +0.8 3,792,050 + ECD_03605 0.67 +0.9 3,792,140 - ECD_03605 0.74 -0.9 3,792,345 + ECD_03605 0.89 -0.1 3,792,346 - ECD_03605 0.89 -0.1 3,792,346 - ECD_03605 0.89 +0.3 3,792,400 + -1.9 3,792,414 + -2.6 3,792,415 - +0.5 3,792,504 + -2.1 3,792,504 + -1.2 3,792,519 - -0.8 3,792,560 - -1.8 3,792,560 - -0.1 3,792,583 + -2.8 3,792,584 - -2.9 3,792,584 - +0.5 3,792,584 - +0.5 3,792,584 - -0.0 3,792,584 - +2.3 3,792,584 - +0.7 3,792,584 - +1.2 3,792,592 - +0.1 3,792,604 - -0.4 3,792,614 - +1.2 3,792,614 - -1.9 3,792,614 - -0.8 3,792,617 - -0.3 3,792,688 - +0.1 3,792,808 + ECD_03606 0.15 +0.7 3,792,808 + ECD_03606 0.15 +0.3 3,792,809 - ECD_03606 0.15 -0.2 3,792,809 - ECD_03606 0.15 +1.0 3,792,809 - ECD_03606 0.15 +2.3 3,792,882 + ECD_03606 0.19 +0.4 3,792,883 - ECD_03606 0.19 -0.4 3,792,915 + ECD_03606 0.21 -1.4 3,792,966 + ECD_03606 0.24 -0.2 3,792,987 + ECD_03606 0.25 -0.2 3,792,987 + ECD_03606 0.25 +0.6 3,792,988 - ECD_03606 0.25 -1.2 3,792,988 - ECD_03606 0.25 +0.4 3,792,988 - ECD_03606 0.25 -0.1 3,792,988 - ECD_03606 0.25 +1.0 3,793,240 - ECD_03606 0.38 -1.9 3,793,260 - ECD_03606 0.39 -0.4 3,793,260 - ECD_03606 0.39 +1.1 3,793,260 - ECD_03606 0.39 -0.8 3,793,263 + ECD_03606 0.39 +0.8 3,793,264 - ECD_03606 0.39 -2.1 3,793,283 + ECD_03606 0.40 +0.4 3,793,284 - ECD_03606 0.41 +0.9 3,793,284 - ECD_03606 0.41 +1.4 3,793,285 + ECD_03606 0.41 -0.2 3,793,285 + ECD_03606 0.41 +1.5 3,793,285 + ECD_03606 0.41 +0.8 3,793,285 + ECD_03606 0.41 +1.0 3,793,285 + ECD_03606 0.41 +0.6 3,793,285 + ECD_03606 0.41 +0.0 3,793,285 + ECD_03606 0.41 +0.9 3,793,285 + ECD_03606 0.41 -1.5 3,793,286 - ECD_03606 0.41 -0.1 3,793,303 - ECD_03606 0.42 -1.3 3,793,456 - ECD_03606 0.50 -2.3 3,793,456 - ECD_03606 0.50 +0.3 3,793,456 - ECD_03606 0.50 -2.2 3,793,461 + ECD_03606 0.50 -1.1 3,793,651 + ECD_03606 0.60 -0.5 3,793,652 - ECD_03606 0.60 -0.7 3,793,652 - ECD_03606 0.60 -0.9 3,793,749 + ECD_03606 0.65 +0.9 3,793,764 - ECD_03606 0.66 -2.1 3,793,846 + ECD_03606 0.70 +0.6 3,793,885 - ECD_03606 0.73 +0.2 3,793,920 - ECD_03606 0.74 -0.1 3,793,975 + ECD_03606 0.77 -0.3 3,793,976 - ECD_03606 0.77 -0.3 3,793,979 + ECD_03606 0.78 -1.4 3,793,979 + ECD_03606 0.78 -0.5 3,794,031 + ECD_03606 0.80 -0.6 3,794,032 - ECD_03606 0.80 -0.5 3,794,032 - ECD_03606 0.80 -1.8 3,794,032 - ECD_03606 0.80 +0.7 3,794,208 + ECD_03606 0.90 +0.5 3,794,209 - ECD_03606 0.90 +0.9 3,794,212 + ECD_03606 0.90 -0.3 3,794,212 + ECD_03606 0.90 -1.1 3,794,213 - +0.4 3,794,213 - -0.1 3,794,213 - -2.5 3,794,213 - +1.6 3,794,251 - -0.2 3,794,353 - -1.2 3,794,400 + -0.5 3,794,400 + -1.2 3,794,833 + ECD_03607 0.36 -0.2 3,795,031 + ECD_03607 0.59 -0.0 3,795,031 + ECD_03607 0.59 -0.2 3,795,032 - ECD_03607 0.60 -2.0 3,795,051 + ECD_03607 0.62 -0.3 3,795,087 - ECD_03607 0.66 -1.1 3,795,091 - ECD_03607 0.67 -1.0 3,795,091 - ECD_03607 0.67 -1.4 3,795,132 + ECD_03607 0.72 -0.4 3,795,133 - ECD_03607 0.72 -1.4 3,795,135 + ECD_03607 0.72 -0.8 3,795,136 - ECD_03607 0.72 -0.2 3,795,168 + ECD_03607 0.76 -0.6 3,795,169 - ECD_03607 0.76 -2.6
Or see this region's nucleotide sequence