Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03521 and ECD_03522 are separated by 647 nucleotides ECD_03522 and ECD_03523 are separated by 53 nucleotides
ECD_03521: ECD_03521 - hypothetical protein, at 3,709,771 to 3,712,158
_03521
ECD_03522: ECD_03522 - Single-strand binding protein (SSB) (Helix-destabilizing protein), at 3,712,806 to 3,713,291
_03522
ECD_03523: ECD_03523 - TrbC-like protein, at 3,713,345 to 3,714,508
_03523
Position (kb)
3712
3713
3714 Strain fitness (log2 ratio)
-2
-1
0
1 at 3711.806 kb on + strand, within ECD_03521 at 3711.831 kb on + strand, within ECD_03521 at 3711.841 kb on - strand, within ECD_03521 at 3711.841 kb on - strand, within ECD_03521 at 3711.847 kb on + strand, within ECD_03521 at 3711.848 kb on - strand, within ECD_03521 at 3712.020 kb on - strand at 3712.224 kb on - strand at 3712.380 kb on - strand at 3712.800 kb on + strand at 3712.873 kb on - strand, within ECD_03522 at 3712.873 kb on - strand, within ECD_03522 at 3712.873 kb on - strand, within ECD_03522 at 3713.006 kb on - strand, within ECD_03522 at 3713.040 kb on + strand, within ECD_03522 at 3713.040 kb on + strand, within ECD_03522 at 3713.041 kb on - strand, within ECD_03522 at 3713.280 kb on - strand at 3713.373 kb on + strand at 3713.512 kb on + strand, within ECD_03523 at 3713.633 kb on + strand, within ECD_03523 at 3713.634 kb on - strand, within ECD_03523 at 3713.773 kb on + strand, within ECD_03523 at 3713.927 kb on + strand, within ECD_03523 at 3713.927 kb on + strand, within ECD_03523 at 3713.927 kb on + strand, within ECD_03523 at 3713.927 kb on + strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.928 kb on - strand, within ECD_03523 at 3713.929 kb on + strand, within ECD_03523 at 3713.929 kb on + strand, within ECD_03523 at 3713.930 kb on - strand, within ECD_03523 at 3714.130 kb on + strand, within ECD_03523 at 3714.131 kb on - strand, within ECD_03523 at 3714.131 kb on - strand, within ECD_03523 at 3714.131 kb on - strand, within ECD_03523 at 3714.134 kb on + strand, within ECD_03523 at 3714.134 kb on + strand, within ECD_03523 at 3714.134 kb on + strand, within ECD_03523 at 3714.134 kb on + strand, within ECD_03523 at 3714.134 kb on + strand, within ECD_03523 at 3714.135 kb on - strand, within ECD_03523 at 3714.186 kb on - strand, within ECD_03523 at 3714.186 kb on - strand, within ECD_03523
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 3,711,806 + ECD_03521 0.85 -0.9 3,711,831 + ECD_03521 0.86 +0.3 3,711,841 - ECD_03521 0.87 -0.7 3,711,841 - ECD_03521 0.87 -0.9 3,711,847 + ECD_03521 0.87 +0.4 3,711,848 - ECD_03521 0.87 +0.0 3,712,020 - +0.1 3,712,224 - +0.3 3,712,380 - -0.5 3,712,800 + -0.7 3,712,873 - ECD_03522 0.14 -0.4 3,712,873 - ECD_03522 0.14 +0.5 3,712,873 - ECD_03522 0.14 -1.6 3,713,006 - ECD_03522 0.41 -0.7 3,713,040 + ECD_03522 0.48 -1.7 3,713,040 + ECD_03522 0.48 -0.4 3,713,041 - ECD_03522 0.48 -2.0 3,713,280 - +0.3 3,713,373 + -2.1 3,713,512 + ECD_03523 0.14 +0.1 3,713,633 + ECD_03523 0.25 +1.3 3,713,634 - ECD_03523 0.25 -0.4 3,713,773 + ECD_03523 0.37 -0.6 3,713,927 + ECD_03523 0.50 -1.0 3,713,927 + ECD_03523 0.50 -1.6 3,713,927 + ECD_03523 0.50 +1.5 3,713,927 + ECD_03523 0.50 -0.5 3,713,928 - ECD_03523 0.50 +0.5 3,713,928 - ECD_03523 0.50 +0.9 3,713,928 - ECD_03523 0.50 -0.4 3,713,928 - ECD_03523 0.50 +0.6 3,713,928 - ECD_03523 0.50 -0.4 3,713,928 - ECD_03523 0.50 +0.9 3,713,928 - ECD_03523 0.50 +1.3 3,713,928 - ECD_03523 0.50 +0.3 3,713,928 - ECD_03523 0.50 -0.3 3,713,928 - ECD_03523 0.50 -0.8 3,713,929 + ECD_03523 0.50 -1.1 3,713,929 + ECD_03523 0.50 -0.1 3,713,930 - ECD_03523 0.50 +0.7 3,714,130 + ECD_03523 0.67 +0.7 3,714,131 - ECD_03523 0.68 -0.9 3,714,131 - ECD_03523 0.68 +0.1 3,714,131 - ECD_03523 0.68 +0.4 3,714,134 + ECD_03523 0.68 -0.2 3,714,134 + ECD_03523 0.68 +0.8 3,714,134 + ECD_03523 0.68 -2.0 3,714,134 + ECD_03523 0.68 +1.7 3,714,134 + ECD_03523 0.68 -0.4 3,714,135 - ECD_03523 0.68 -0.4 3,714,186 - ECD_03523 0.72 +0.3 3,714,186 - ECD_03523 0.72 -0.6
Or see this region's nucleotide sequence