Strain Fitness in Escherichia coli BL21 around ECD_03522

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03521 and ECD_03522 are separated by 647 nucleotidesECD_03522 and ECD_03523 are separated by 53 nucleotides ECD_03521: ECD_03521 - hypothetical protein, at 3,709,771 to 3,712,158 _03521 ECD_03522: ECD_03522 - Single-strand binding protein (SSB) (Helix-destabilizing protein), at 3,712,806 to 3,713,291 _03522 ECD_03523: ECD_03523 - TrbC-like protein, at 3,713,345 to 3,714,508 _03523 Position (kb) 3712 3713 3714Strain fitness (log2 ratio) -2 -1 0 1at 3711.806 kb on + strand, within ECD_03521at 3711.831 kb on + strand, within ECD_03521at 3711.841 kb on - strand, within ECD_03521at 3711.841 kb on - strand, within ECD_03521at 3711.847 kb on + strand, within ECD_03521at 3711.848 kb on - strand, within ECD_03521at 3712.020 kb on - strandat 3712.224 kb on - strandat 3712.380 kb on - strandat 3712.800 kb on + strandat 3712.873 kb on - strand, within ECD_03522at 3712.873 kb on - strand, within ECD_03522at 3712.873 kb on - strand, within ECD_03522at 3713.006 kb on - strand, within ECD_03522at 3713.040 kb on + strand, within ECD_03522at 3713.040 kb on + strand, within ECD_03522at 3713.041 kb on - strand, within ECD_03522at 3713.280 kb on - strandat 3713.373 kb on + strandat 3713.512 kb on + strand, within ECD_03523at 3713.633 kb on + strand, within ECD_03523at 3713.634 kb on - strand, within ECD_03523at 3713.773 kb on + strand, within ECD_03523at 3713.927 kb on + strand, within ECD_03523at 3713.927 kb on + strand, within ECD_03523at 3713.927 kb on + strand, within ECD_03523at 3713.927 kb on + strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.928 kb on - strand, within ECD_03523at 3713.929 kb on + strand, within ECD_03523at 3713.929 kb on + strand, within ECD_03523at 3713.930 kb on - strand, within ECD_03523at 3714.130 kb on + strand, within ECD_03523at 3714.131 kb on - strand, within ECD_03523at 3714.131 kb on - strand, within ECD_03523at 3714.131 kb on - strand, within ECD_03523at 3714.134 kb on + strand, within ECD_03523at 3714.134 kb on + strand, within ECD_03523at 3714.134 kb on + strand, within ECD_03523at 3714.134 kb on + strand, within ECD_03523at 3714.134 kb on + strand, within ECD_03523at 3714.135 kb on - strand, within ECD_03523at 3714.186 kb on - strand, within ECD_03523at 3714.186 kb on - strand, within ECD_03523

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,711,806 + ECD_03521 0.85 -0.9
3,711,831 + ECD_03521 0.86 +0.3
3,711,841 - ECD_03521 0.87 -0.7
3,711,841 - ECD_03521 0.87 -0.9
3,711,847 + ECD_03521 0.87 +0.4
3,711,848 - ECD_03521 0.87 +0.0
3,712,020 - +0.1
3,712,224 - +0.3
3,712,380 - -0.5
3,712,800 + -0.7
3,712,873 - ECD_03522 0.14 -0.4
3,712,873 - ECD_03522 0.14 +0.5
3,712,873 - ECD_03522 0.14 -1.6
3,713,006 - ECD_03522 0.41 -0.7
3,713,040 + ECD_03522 0.48 -1.7
3,713,040 + ECD_03522 0.48 -0.4
3,713,041 - ECD_03522 0.48 -2.0
3,713,280 - +0.3
3,713,373 + -2.1
3,713,512 + ECD_03523 0.14 +0.1
3,713,633 + ECD_03523 0.25 +1.3
3,713,634 - ECD_03523 0.25 -0.4
3,713,773 + ECD_03523 0.37 -0.6
3,713,927 + ECD_03523 0.50 -1.0
3,713,927 + ECD_03523 0.50 -1.6
3,713,927 + ECD_03523 0.50 +1.5
3,713,927 + ECD_03523 0.50 -0.5
3,713,928 - ECD_03523 0.50 +0.5
3,713,928 - ECD_03523 0.50 +0.9
3,713,928 - ECD_03523 0.50 -0.4
3,713,928 - ECD_03523 0.50 +0.6
3,713,928 - ECD_03523 0.50 -0.4
3,713,928 - ECD_03523 0.50 +0.9
3,713,928 - ECD_03523 0.50 +1.3
3,713,928 - ECD_03523 0.50 +0.3
3,713,928 - ECD_03523 0.50 -0.3
3,713,928 - ECD_03523 0.50 -0.8
3,713,929 + ECD_03523 0.50 -1.1
3,713,929 + ECD_03523 0.50 -0.1
3,713,930 - ECD_03523 0.50 +0.7
3,714,130 + ECD_03523 0.67 +0.7
3,714,131 - ECD_03523 0.68 -0.9
3,714,131 - ECD_03523 0.68 +0.1
3,714,131 - ECD_03523 0.68 +0.4
3,714,134 + ECD_03523 0.68 -0.2
3,714,134 + ECD_03523 0.68 +0.8
3,714,134 + ECD_03523 0.68 -2.0
3,714,134 + ECD_03523 0.68 +1.7
3,714,134 + ECD_03523 0.68 -0.4
3,714,135 - ECD_03523 0.68 -0.4
3,714,186 - ECD_03523 0.72 +0.3
3,714,186 - ECD_03523 0.72 -0.6

Or see this region's nucleotide sequence