Strain Fitness in Escherichia coli BL21 around ECD_03481

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03480 and ECD_03481 are separated by 84 nucleotidesECD_03481 and ECD_03482 are separated by 25 nucleotides ECD_03480: ECD_03480 - putative beta1,3-glucosyltransferase, at 3,666,307 to 3,667,290 _03480 ECD_03481: ECD_03481 - UDP-galactose:(Galactosyl) LPS alpha1,2-galactosyltransferase, at 3,667,375 to 3,668,400 _03481 ECD_03482: ECD_03482 - WaaY protein, involved in phospohrylation of core oligosaccharide heptose, at 3,668,426 to 3,668,974 _03482 Position (kb) 3667 3668 3669Strain fitness (log2 ratio) -1 0 1at 3666.569 kb on - strand, within ECD_03480at 3666.670 kb on - strand, within ECD_03480at 3666.894 kb on - strand, within ECD_03480at 3666.991 kb on - strand, within ECD_03480at 3667.608 kb on - strand, within ECD_03481at 3667.800 kb on + strand, within ECD_03481

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,666,569 - ECD_03480 0.27 -0.2
3,666,670 - ECD_03480 0.37 -0.5
3,666,894 - ECD_03480 0.60 -0.3
3,666,991 - ECD_03480 0.70 +0.5
3,667,608 - ECD_03481 0.23 -0.6
3,667,800 + ECD_03481 0.41 -1.2

Or see this region's nucleotide sequence