Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03473 and ECD_03474 are separated by 238 nucleotides ECD_03474 and ECD_03475 are separated by 9 nucleotides
ECD_03473: ECD_03473 - LPS(HepIII)-glucuronic acid glycosyltransferase, at 3,658,248 to 3,659,282
_03473
ECD_03474: ECD_03474 - L-threonine 3-dehydrogenase, NAD(P)-binding, at 3,659,521 to 3,660,546
_03474
ECD_03475: ECD_03475 - glycine C-acetyltransferase, at 3,660,556 to 3,661,752
_03475
Position (kb)
3659
3660
3661 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3658.626 kb on - strand, within ECD_03473 at 3658.626 kb on - strand, within ECD_03473 at 3658.644 kb on - strand, within ECD_03473 at 3658.645 kb on + strand, within ECD_03473 at 3658.646 kb on - strand, within ECD_03473 at 3658.976 kb on - strand, within ECD_03473 at 3658.976 kb on - strand, within ECD_03473 at 3659.021 kb on - strand, within ECD_03473 at 3659.120 kb on - strand, within ECD_03473 at 3659.120 kb on - strand, within ECD_03473 at 3659.120 kb on - strand, within ECD_03473 at 3659.163 kb on - strand, within ECD_03473 at 3659.240 kb on - strand at 3659.283 kb on - strand at 3659.341 kb on + strand at 3659.414 kb on + strand at 3659.415 kb on - strand at 3659.416 kb on + strand at 3659.417 kb on - strand at 3659.434 kb on - strand at 3659.448 kb on - strand at 3659.596 kb on - strand at 3659.611 kb on - strand at 3659.691 kb on + strand, within ECD_03474 at 3659.742 kb on + strand, within ECD_03474 at 3659.743 kb on - strand, within ECD_03474 at 3660.015 kb on + strand, within ECD_03474 at 3660.016 kb on - strand, within ECD_03474 at 3660.018 kb on + strand, within ECD_03474 at 3660.019 kb on - strand, within ECD_03474 at 3660.019 kb on - strand, within ECD_03474 at 3660.019 kb on - strand, within ECD_03474 at 3660.133 kb on - strand, within ECD_03474 at 3660.133 kb on - strand, within ECD_03474 at 3660.333 kb on + strand, within ECD_03474 at 3660.334 kb on - strand, within ECD_03474 at 3660.353 kb on + strand, within ECD_03474 at 3660.353 kb on + strand, within ECD_03474 at 3660.353 kb on + strand, within ECD_03474 at 3660.353 kb on + strand, within ECD_03474 at 3660.354 kb on - strand, within ECD_03474 at 3660.354 kb on - strand, within ECD_03474 at 3660.354 kb on - strand, within ECD_03474 at 3660.411 kb on + strand, within ECD_03474 at 3660.412 kb on - strand, within ECD_03474 at 3660.412 kb on - strand, within ECD_03474 at 3660.413 kb on + strand, within ECD_03474 at 3660.413 kb on + strand, within ECD_03474 at 3660.413 kb on + strand, within ECD_03474 at 3660.413 kb on + strand, within ECD_03474 at 3660.413 kb on + strand, within ECD_03474 at 3660.413 kb on + strand, within ECD_03474 at 3660.413 kb on + strand, within ECD_03474 at 3660.413 kb on + strand, within ECD_03474 at 3660.414 kb on - strand, within ECD_03474 at 3660.414 kb on - strand, within ECD_03474 at 3660.414 kb on - strand, within ECD_03474 at 3660.414 kb on - strand, within ECD_03474 at 3660.414 kb on - strand, within ECD_03474 at 3660.414 kb on - strand, within ECD_03474 at 3660.456 kb on + strand at 3660.457 kb on - strand at 3660.602 kb on - strand at 3660.602 kb on - strand at 3660.612 kb on + strand at 3660.702 kb on - strand, within ECD_03475 at 3660.702 kb on - strand, within ECD_03475 at 3660.702 kb on - strand, within ECD_03475 at 3660.993 kb on + strand, within ECD_03475 at 3660.996 kb on - strand, within ECD_03475 at 3661.070 kb on + strand, within ECD_03475 at 3661.071 kb on - strand, within ECD_03475 at 3661.126 kb on + strand, within ECD_03475 at 3661.126 kb on + strand, within ECD_03475 at 3661.145 kb on + strand, within ECD_03475 at 3661.145 kb on + strand, within ECD_03475 at 3661.146 kb on - strand, within ECD_03475 at 3661.146 kb on - strand, within ECD_03475 at 3661.149 kb on + strand, within ECD_03475 at 3661.149 kb on + strand, within ECD_03475 at 3661.150 kb on - strand, within ECD_03475 at 3661.150 kb on - strand, within ECD_03475 at 3661.150 kb on - strand, within ECD_03475 at 3661.150 kb on - strand, within ECD_03475 at 3661.282 kb on - strand, within ECD_03475 at 3661.309 kb on - strand, within ECD_03475 at 3661.335 kb on + strand, within ECD_03475 at 3661.336 kb on - strand, within ECD_03475 at 3661.338 kb on + strand, within ECD_03475 at 3661.366 kb on - strand, within ECD_03475 at 3661.431 kb on - strand, within ECD_03475
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 3,658,626 - ECD_03473 0.37 +0.2 3,658,626 - ECD_03473 0.37 +0.3 3,658,644 - ECD_03473 0.38 +1.3 3,658,645 + ECD_03473 0.38 -2.3 3,658,646 - ECD_03473 0.38 -1.5 3,658,976 - ECD_03473 0.70 -1.9 3,658,976 - ECD_03473 0.70 -0.1 3,659,021 - ECD_03473 0.75 -0.2 3,659,120 - ECD_03473 0.84 +0.3 3,659,120 - ECD_03473 0.84 -0.4 3,659,120 - ECD_03473 0.84 -0.2 3,659,163 - ECD_03473 0.88 -0.4 3,659,240 - +1.0 3,659,283 - -0.2 3,659,341 + -1.9 3,659,414 + +0.5 3,659,415 - +0.6 3,659,416 + +0.4 3,659,417 - -0.2 3,659,434 - +1.2 3,659,448 - -0.3 3,659,596 - -1.8 3,659,611 - -1.7 3,659,691 + ECD_03474 0.17 -0.7 3,659,742 + ECD_03474 0.22 -2.9 3,659,743 - ECD_03474 0.22 -3.5 3,660,015 + ECD_03474 0.48 -1.0 3,660,016 - ECD_03474 0.48 +0.3 3,660,018 + ECD_03474 0.48 -1.4 3,660,019 - ECD_03474 0.49 -0.8 3,660,019 - ECD_03474 0.49 -1.4 3,660,019 - ECD_03474 0.49 -0.4 3,660,133 - ECD_03474 0.60 -1.9 3,660,133 - ECD_03474 0.60 -1.0 3,660,333 + ECD_03474 0.79 -0.9 3,660,334 - ECD_03474 0.79 -3.8 3,660,353 + ECD_03474 0.81 -1.4 3,660,353 + ECD_03474 0.81 -2.1 3,660,353 + ECD_03474 0.81 -1.5 3,660,353 + ECD_03474 0.81 -2.5 3,660,354 - ECD_03474 0.81 -3.5 3,660,354 - ECD_03474 0.81 -2.8 3,660,354 - ECD_03474 0.81 -0.3 3,660,411 + ECD_03474 0.87 -2.3 3,660,412 - ECD_03474 0.87 -1.7 3,660,412 - ECD_03474 0.87 -3.3 3,660,413 + ECD_03474 0.87 +0.1 3,660,413 + ECD_03474 0.87 -2.0 3,660,413 + ECD_03474 0.87 -0.9 3,660,413 + ECD_03474 0.87 -1.6 3,660,413 + ECD_03474 0.87 +0.2 3,660,413 + ECD_03474 0.87 -0.9 3,660,413 + ECD_03474 0.87 -2.1 3,660,413 + ECD_03474 0.87 -1.1 3,660,414 - ECD_03474 0.87 -0.6 3,660,414 - ECD_03474 0.87 -0.6 3,660,414 - ECD_03474 0.87 -1.5 3,660,414 - ECD_03474 0.87 -2.8 3,660,414 - ECD_03474 0.87 -0.9 3,660,414 - ECD_03474 0.87 -0.3 3,660,456 + -3.9 3,660,457 - -3.0 3,660,602 - +0.3 3,660,602 - +0.3 3,660,612 + -0.4 3,660,702 - ECD_03475 0.12 -0.4 3,660,702 - ECD_03475 0.12 -0.5 3,660,702 - ECD_03475 0.12 -2.5 3,660,993 + ECD_03475 0.37 -0.4 3,660,996 - ECD_03475 0.37 +0.1 3,661,070 + ECD_03475 0.43 +0.7 3,661,071 - ECD_03475 0.43 -0.4 3,661,126 + ECD_03475 0.48 -0.8 3,661,126 + ECD_03475 0.48 -1.0 3,661,145 + ECD_03475 0.49 -0.3 3,661,145 + ECD_03475 0.49 -0.3 3,661,146 - ECD_03475 0.49 -0.8 3,661,146 - ECD_03475 0.49 +0.5 3,661,149 + ECD_03475 0.50 +0.2 3,661,149 + ECD_03475 0.50 -0.5 3,661,150 - ECD_03475 0.50 +0.0 3,661,150 - ECD_03475 0.50 -0.7 3,661,150 - ECD_03475 0.50 -2.2 3,661,150 - ECD_03475 0.50 -1.3 3,661,282 - ECD_03475 0.61 -0.2 3,661,309 - ECD_03475 0.63 -2.3 3,661,335 + ECD_03475 0.65 -1.7 3,661,336 - ECD_03475 0.65 -2.0 3,661,338 + ECD_03475 0.65 -2.5 3,661,366 - ECD_03475 0.68 -0.4 3,661,431 - ECD_03475 0.73 -0.0
Or see this region's nucleotide sequence