Strain Fitness in Escherichia coli BL21 around ECD_03371

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03370 and ECD_03371 are separated by 410 nucleotidesECD_03371 and ECD_03372 are separated by 181 nucleotides ECD_03370: ECD_03370 - inner membrane putative BrbK family alternate lipid exporter, at 3,534,550 to 3,535,563 _03370 ECD_03371: ECD_03371 - putative MFS transporter; membrane protein, at 3,535,974 to 3,537,296 _03371 ECD_03372: ECD_03372 - putative inner membrane-anchored periplasmic AsmA family protein, at 3,537,478 to 3,539,538 _03372 Position (kb) 3535 3536 3537 3538Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2at 3535.088 kb on + strand, within ECD_03370at 3535.188 kb on + strand, within ECD_03370at 3535.274 kb on - strand, within ECD_03370at 3535.274 kb on - strand, within ECD_03370at 3535.274 kb on - strand, within ECD_03370at 3535.274 kb on - strand, within ECD_03370at 3535.359 kb on + strand, within ECD_03370at 3535.393 kb on + strand, within ECD_03370at 3535.394 kb on - strand, within ECD_03370at 3535.394 kb on - strand, within ECD_03370at 3535.664 kb on + strandat 3535.675 kb on + strandat 3535.761 kb on - strandat 3535.836 kb on + strandat 3535.936 kb on - strandat 3535.936 kb on - strandat 3536.013 kb on + strandat 3536.013 kb on + strandat 3536.013 kb on + strandat 3536.013 kb on + strandat 3536.013 kb on + strandat 3536.014 kb on - strandat 3536.036 kb on + strandat 3536.094 kb on + strandat 3536.095 kb on - strandat 3536.095 kb on - strandat 3536.126 kb on + strand, within ECD_03371at 3536.127 kb on - strand, within ECD_03371at 3536.164 kb on + strand, within ECD_03371at 3536.389 kb on + strand, within ECD_03371at 3536.457 kb on + strand, within ECD_03371at 3536.458 kb on - strand, within ECD_03371at 3536.458 kb on - strand, within ECD_03371at 3536.579 kb on + strand, within ECD_03371at 3536.579 kb on + strand, within ECD_03371at 3536.613 kb on + strand, within ECD_03371at 3536.613 kb on + strand, within ECD_03371at 3536.614 kb on - strand, within ECD_03371at 3536.614 kb on - strand, within ECD_03371at 3536.614 kb on - strand, within ECD_03371at 3536.614 kb on - strand, within ECD_03371at 3536.614 kb on - strand, within ECD_03371at 3536.614 kb on - strand, within ECD_03371at 3536.614 kb on - strand, within ECD_03371at 3536.614 kb on - strand, within ECD_03371at 3536.741 kb on + strand, within ECD_03371at 3536.742 kb on - strand, within ECD_03371at 3536.742 kb on - strand, within ECD_03371at 3536.754 kb on + strand, within ECD_03371at 3536.754 kb on + strand, within ECD_03371at 3536.754 kb on + strand, within ECD_03371at 3536.754 kb on + strand, within ECD_03371at 3536.754 kb on + strand, within ECD_03371at 3536.754 kb on + strand, within ECD_03371at 3536.755 kb on - strand, within ECD_03371at 3536.755 kb on - strand, within ECD_03371at 3536.755 kb on - strand, within ECD_03371at 3536.755 kb on - strand, within ECD_03371at 3536.755 kb on - strand, within ECD_03371at 3536.756 kb on + strand, within ECD_03371at 3536.767 kb on - strand, within ECD_03371at 3536.781 kb on + strand, within ECD_03371at 3536.781 kb on + strand, within ECD_03371at 3536.782 kb on - strand, within ECD_03371at 3536.786 kb on + strand, within ECD_03371at 3536.786 kb on + strand, within ECD_03371at 3536.786 kb on + strand, within ECD_03371at 3536.786 kb on + strand, within ECD_03371at 3536.787 kb on - strand, within ECD_03371at 3536.787 kb on - strand, within ECD_03371at 3536.795 kb on + strand, within ECD_03371at 3536.868 kb on - strand, within ECD_03371at 3536.938 kb on + strand, within ECD_03371at 3536.938 kb on + strand, within ECD_03371at 3537.132 kb on + strand, within ECD_03371at 3537.133 kb on - strand, within ECD_03371at 3537.140 kb on - strand, within ECD_03371at 3537.140 kb on - strand, within ECD_03371at 3537.171 kb on + strandat 3537.171 kb on + strandat 3537.172 kb on - strandat 3537.172 kb on - strandat 3537.172 kb on - strandat 3537.173 kb on + strandat 3537.174 kb on - strandat 3537.195 kb on - strandat 3537.195 kb on - strandat 3537.199 kb on - strandat 3537.220 kb on + strandat 3537.220 kb on + strandat 3537.222 kb on + strandat 3537.222 kb on + strandat 3537.222 kb on + strandat 3537.222 kb on + strandat 3537.223 kb on - strandat 3537.295 kb on - strandat 3537.295 kb on - strandat 3537.295 kb on - strandat 3537.297 kb on + strandat 3537.298 kb on - strandat 3537.327 kb on - strandat 3537.350 kb on + strandat 3537.350 kb on + strandat 3537.350 kb on + strandat 3537.351 kb on - strandat 3537.444 kb on + strandat 3537.445 kb on - strandat 3537.473 kb on + strandat 3537.474 kb on - strandat 3537.474 kb on - strandat 3537.762 kb on + strand, within ECD_03372at 3537.763 kb on - strand, within ECD_03372at 3537.871 kb on + strand, within ECD_03372at 3537.871 kb on + strand, within ECD_03372at 3537.887 kb on + strand, within ECD_03372at 3537.887 kb on + strand, within ECD_03372at 3537.887 kb on + strand, within ECD_03372at 3537.887 kb on + strand, within ECD_03372at 3537.888 kb on - strand, within ECD_03372at 3538.000 kb on - strand, within ECD_03372at 3538.012 kb on + strand, within ECD_03372at 3538.149 kb on + strand, within ECD_03372at 3538.149 kb on + strand, within ECD_03372at 3538.150 kb on - strand, within ECD_03372at 3538.224 kb on + strand, within ECD_03372at 3538.224 kb on + strand, within ECD_03372at 3538.224 kb on + strand, within ECD_03372at 3538.224 kb on + strand, within ECD_03372at 3538.225 kb on - strand, within ECD_03372at 3538.225 kb on - strand, within ECD_03372at 3538.225 kb on - strand, within ECD_03372at 3538.230 kb on + strand, within ECD_03372

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,535,088 + ECD_03370 0.53 -2.2
3,535,188 + ECD_03370 0.63 -2.2
3,535,274 - ECD_03370 0.71 -0.9
3,535,274 - ECD_03370 0.71 +0.2
3,535,274 - ECD_03370 0.71 +1.0
3,535,274 - ECD_03370 0.71 -0.9
3,535,359 + ECD_03370 0.80 -2.8
3,535,393 + ECD_03370 0.83 +0.5
3,535,394 - ECD_03370 0.83 -0.4
3,535,394 - ECD_03370 0.83 +0.1
3,535,664 + -1.5
3,535,675 + -1.9
3,535,761 - +1.3
3,535,836 + -1.5
3,535,936 - +0.3
3,535,936 - -0.1
3,536,013 + -0.3
3,536,013 + -2.4
3,536,013 + -0.8
3,536,013 + -0.2
3,536,013 + +1.0
3,536,014 - +0.9
3,536,036 + +0.5
3,536,094 + -0.2
3,536,095 - +0.6
3,536,095 - +1.2
3,536,126 + ECD_03371 0.11 +0.1
3,536,127 - ECD_03371 0.12 +0.6
3,536,164 + ECD_03371 0.14 -0.8
3,536,389 + ECD_03371 0.31 -1.9
3,536,457 + ECD_03371 0.37 -0.8
3,536,458 - ECD_03371 0.37 -0.7
3,536,458 - ECD_03371 0.37 -2.6
3,536,579 + ECD_03371 0.46 +0.7
3,536,579 + ECD_03371 0.46 -2.0
3,536,613 + ECD_03371 0.48 -0.6
3,536,613 + ECD_03371 0.48 -1.4
3,536,614 - ECD_03371 0.48 -0.3
3,536,614 - ECD_03371 0.48 -0.6
3,536,614 - ECD_03371 0.48 +0.2
3,536,614 - ECD_03371 0.48 +0.1
3,536,614 - ECD_03371 0.48 +0.3
3,536,614 - ECD_03371 0.48 -0.6
3,536,614 - ECD_03371 0.48 -1.6
3,536,614 - ECD_03371 0.48 -1.0
3,536,741 + ECD_03371 0.58 -0.4
3,536,742 - ECD_03371 0.58 +0.5
3,536,742 - ECD_03371 0.58 -2.9
3,536,754 + ECD_03371 0.59 +0.8
3,536,754 + ECD_03371 0.59 -1.1
3,536,754 + ECD_03371 0.59 -0.9
3,536,754 + ECD_03371 0.59 -3.1
3,536,754 + ECD_03371 0.59 -0.3
3,536,754 + ECD_03371 0.59 +1.5
3,536,755 - ECD_03371 0.59 +1.0
3,536,755 - ECD_03371 0.59 -1.7
3,536,755 - ECD_03371 0.59 -0.7
3,536,755 - ECD_03371 0.59 -0.2
3,536,755 - ECD_03371 0.59 +0.5
3,536,756 + ECD_03371 0.59 -0.7
3,536,767 - ECD_03371 0.60 -0.6
3,536,781 + ECD_03371 0.61 +0.3
3,536,781 + ECD_03371 0.61 -1.4
3,536,782 - ECD_03371 0.61 +1.0
3,536,786 + ECD_03371 0.61 +0.3
3,536,786 + ECD_03371 0.61 +0.2
3,536,786 + ECD_03371 0.61 -2.1
3,536,786 + ECD_03371 0.61 -1.2
3,536,787 - ECD_03371 0.61 -1.3
3,536,787 - ECD_03371 0.61 +0.9
3,536,795 + ECD_03371 0.62 -1.0
3,536,868 - ECD_03371 0.68 +1.1
3,536,938 + ECD_03371 0.73 -0.3
3,536,938 + ECD_03371 0.73 -1.8
3,537,132 + ECD_03371 0.88 -0.9
3,537,133 - ECD_03371 0.88 -0.2
3,537,140 - ECD_03371 0.88 +1.2
3,537,140 - ECD_03371 0.88 -0.7
3,537,171 + +2.1
3,537,171 + +0.4
3,537,172 - +1.0
3,537,172 - +1.2
3,537,172 - +0.1
3,537,173 + -1.6
3,537,174 - +0.8
3,537,195 - -1.8
3,537,195 - +1.1
3,537,199 - -1.1
3,537,220 + -1.0
3,537,220 + -0.5
3,537,222 + +0.7
3,537,222 + -0.3
3,537,222 + -0.7
3,537,222 + +0.6
3,537,223 - +0.7
3,537,295 - -3.1
3,537,295 - +1.7
3,537,295 - +0.2
3,537,297 + -0.6
3,537,298 - -1.1
3,537,327 - +1.0
3,537,350 + -1.6
3,537,350 + -0.6
3,537,350 + +0.0
3,537,351 - -0.2
3,537,444 + +0.6
3,537,445 - -0.3
3,537,473 + +0.3
3,537,474 - -1.1
3,537,474 - +0.1
3,537,762 + ECD_03372 0.14 -3.0
3,537,763 - ECD_03372 0.14 -0.6
3,537,871 + ECD_03372 0.19 -1.8
3,537,871 + ECD_03372 0.19 +0.4
3,537,887 + ECD_03372 0.20 -0.6
3,537,887 + ECD_03372 0.20 +1.5
3,537,887 + ECD_03372 0.20 +0.5
3,537,887 + ECD_03372 0.20 -0.0
3,537,888 - ECD_03372 0.20 -1.4
3,538,000 - ECD_03372 0.25 -0.2
3,538,012 + ECD_03372 0.26 -0.9
3,538,149 + ECD_03372 0.33 -0.3
3,538,149 + ECD_03372 0.33 -0.6
3,538,150 - ECD_03372 0.33 +0.7
3,538,224 + ECD_03372 0.36 -1.4
3,538,224 + ECD_03372 0.36 +0.4
3,538,224 + ECD_03372 0.36 -1.3
3,538,224 + ECD_03372 0.36 -0.9
3,538,225 - ECD_03372 0.36 +0.9
3,538,225 - ECD_03372 0.36 -1.6
3,538,225 - ECD_03372 0.36 -4.2
3,538,230 + ECD_03372 0.36 +0.2

Or see this region's nucleotide sequence