Strain Fitness in Escherichia coli BL21 around ECD_03210

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03209 and ECD_03210 are separated by 66 nucleotidesECD_03210 and ECD_03211 are separated by 85 nucleotidesECD_03211 and ECD_03212 are separated by 31 nucleotides ECD_03209: ECD_03209 - putative transporter, FUSC superfamily inner membrane protein, at 3,346,392 to 3,348,494 _03209 ECD_03210: ECD_03210 - bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase, at 3,348,561 to 3,349,781 _03210 ECD_03211: ECD_03211 - aminodeoxychorismate synthase, subunit II, at 3,349,867 to 3,350,430 _03211 ECD_03212: ECD_03212 - stationary phase-induced protein, putative toxin, at 3,350,462 to 3,351,064 _03212 Position (kb) 3348 3349 3350Strain fitness (log2 ratio) -3 -2 -1 0 1at 3347.590 kb on + strand, within ECD_03209at 3347.713 kb on - strand, within ECD_03209at 3347.713 kb on - strand, within ECD_03209at 3347.799 kb on - strand, within ECD_03209at 3347.799 kb on - strand, within ECD_03209at 3347.811 kb on + strand, within ECD_03209at 3347.811 kb on + strand, within ECD_03209at 3347.811 kb on + strand, within ECD_03209at 3347.811 kb on + strand, within ECD_03209at 3347.812 kb on - strand, within ECD_03209at 3347.812 kb on - strand, within ECD_03209at 3347.812 kb on - strand, within ECD_03209at 3347.812 kb on - strand, within ECD_03209at 3347.814 kb on - strand, within ECD_03209at 3347.824 kb on + strand, within ECD_03209at 3347.825 kb on - strand, within ECD_03209at 3347.825 kb on - strand, within ECD_03209at 3347.847 kb on + strand, within ECD_03209at 3347.847 kb on + strand, within ECD_03209at 3347.847 kb on + strand, within ECD_03209at 3347.847 kb on + strand, within ECD_03209at 3347.848 kb on - strand, within ECD_03209at 3347.848 kb on - strand, within ECD_03209at 3347.848 kb on - strand, within ECD_03209at 3347.887 kb on + strand, within ECD_03209at 3347.887 kb on + strand, within ECD_03209at 3347.974 kb on - strand, within ECD_03209at 3348.017 kb on + strand, within ECD_03209at 3348.018 kb on - strand, within ECD_03209at 3348.059 kb on + strand, within ECD_03209at 3348.059 kb on + strand, within ECD_03209at 3348.059 kb on + strand, within ECD_03209at 3348.060 kb on - strand, within ECD_03209at 3348.060 kb on - strand, within ECD_03209at 3348.060 kb on - strand, within ECD_03209at 3348.069 kb on + strand, within ECD_03209at 3348.069 kb on + strand, within ECD_03209at 3348.072 kb on - strand, within ECD_03209at 3348.072 kb on - strand, within ECD_03209at 3348.118 kb on - strand, within ECD_03209at 3348.128 kb on + strand, within ECD_03209at 3348.170 kb on + strand, within ECD_03209at 3348.170 kb on + strand, within ECD_03209at 3348.170 kb on + strand, within ECD_03209at 3348.170 kb on + strand, within ECD_03209at 3348.171 kb on - strand, within ECD_03209at 3348.171 kb on - strand, within ECD_03209at 3348.171 kb on - strand, within ECD_03209at 3348.173 kb on + strand, within ECD_03209at 3348.174 kb on - strand, within ECD_03209at 3348.234 kb on + strand, within ECD_03209at 3348.234 kb on + strand, within ECD_03209at 3348.235 kb on - strand, within ECD_03209at 3348.239 kb on - strand, within ECD_03209at 3348.362 kb on + strandat 3348.379 kb on + strandat 3348.380 kb on - strandat 3348.493 kb on - strandat 3348.493 kb on - strandat 3348.502 kb on + strandat 3348.558 kb on + strandat 3348.559 kb on - strandat 3348.685 kb on - strand, within ECD_03210at 3348.706 kb on + strand, within ECD_03210at 3348.734 kb on - strand, within ECD_03210at 3348.734 kb on - strand, within ECD_03210at 3348.786 kb on - strand, within ECD_03210at 3348.789 kb on + strand, within ECD_03210at 3348.789 kb on + strand, within ECD_03210at 3348.790 kb on - strand, within ECD_03210at 3348.797 kb on - strand, within ECD_03210at 3348.920 kb on + strand, within ECD_03210at 3349.060 kb on + strand, within ECD_03210at 3349.060 kb on + strand, within ECD_03210at 3349.061 kb on - strand, within ECD_03210at 3349.061 kb on - strand, within ECD_03210at 3349.061 kb on - strand, within ECD_03210at 3349.061 kb on - strand, within ECD_03210at 3349.061 kb on - strand, within ECD_03210at 3349.380 kb on - strand, within ECD_03210at 3349.400 kb on + strand, within ECD_03210at 3349.400 kb on + strand, within ECD_03210at 3349.401 kb on - strand, within ECD_03210at 3349.434 kb on - strand, within ECD_03210at 3349.449 kb on - strand, within ECD_03210at 3349.470 kb on - strand, within ECD_03210at 3349.554 kb on - strand, within ECD_03210at 3349.651 kb on + strand, within ECD_03210at 3349.652 kb on - strand, within ECD_03210at 3349.652 kb on - strand, within ECD_03210at 3349.703 kb on + strandat 3349.704 kb on - strandat 3349.721 kb on - strandat 3349.721 kb on - strandat 3349.798 kb on + strandat 3349.798 kb on + strandat 3349.799 kb on - strandat 3349.799 kb on - strandat 3349.799 kb on - strandat 3349.799 kb on - strandat 3349.821 kb on - strandat 3349.834 kb on - strandat 3349.917 kb on + strandat 3350.021 kb on - strand, within ECD_03211at 3350.052 kb on - strand, within ECD_03211at 3350.064 kb on + strand, within ECD_03211at 3350.103 kb on + strand, within ECD_03211at 3350.103 kb on + strand, within ECD_03211at 3350.268 kb on + strand, within ECD_03211at 3350.269 kb on - strand, within ECD_03211at 3350.269 kb on - strand, within ECD_03211at 3350.409 kb on - strandat 3350.409 kb on - strandat 3350.409 kb on - strandat 3350.409 kb on - strandat 3350.412 kb on + strandat 3350.413 kb on - strandat 3350.413 kb on - strandat 3350.413 kb on - strandat 3350.416 kb on + strandat 3350.416 kb on + strandat 3350.416 kb on + strandat 3350.417 kb on - strandat 3350.417 kb on - strandat 3350.417 kb on - strandat 3350.418 kb on + strandat 3350.418 kb on + strandat 3350.419 kb on - strandat 3350.459 kb on - strandat 3350.463 kb on + strandat 3350.498 kb on - strandat 3350.498 kb on - strandat 3350.501 kb on + strandat 3350.502 kb on - strandat 3350.683 kb on - strand, within ECD_03212at 3350.685 kb on + strand, within ECD_03212

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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3,347,590 + ECD_03209 0.57 -2.4
3,347,713 - ECD_03209 0.63 +1.2
3,347,713 - ECD_03209 0.63 -0.4
3,347,799 - ECD_03209 0.67 +0.0
3,347,799 - ECD_03209 0.67 -1.2
3,347,811 + ECD_03209 0.67 -1.8
3,347,811 + ECD_03209 0.67 -1.0
3,347,811 + ECD_03209 0.67 -0.9
3,347,811 + ECD_03209 0.67 +0.2
3,347,812 - ECD_03209 0.68 +0.2
3,347,812 - ECD_03209 0.68 -1.6
3,347,812 - ECD_03209 0.68 +0.5
3,347,812 - ECD_03209 0.68 +0.4
3,347,814 - ECD_03209 0.68 +0.6
3,347,824 + ECD_03209 0.68 -1.0
3,347,825 - ECD_03209 0.68 -0.4
3,347,825 - ECD_03209 0.68 -1.2
3,347,847 + ECD_03209 0.69 -0.3
3,347,847 + ECD_03209 0.69 -0.6
3,347,847 + ECD_03209 0.69 -0.1
3,347,847 + ECD_03209 0.69 +0.1
3,347,848 - ECD_03209 0.69 -1.9
3,347,848 - ECD_03209 0.69 +1.1
3,347,848 - ECD_03209 0.69 -1.0
3,347,887 + ECD_03209 0.71 -1.1
3,347,887 + ECD_03209 0.71 -1.9
3,347,974 - ECD_03209 0.75 +1.0
3,348,017 + ECD_03209 0.77 +0.2
3,348,018 - ECD_03209 0.77 -0.7
3,348,059 + ECD_03209 0.79 -0.3
3,348,059 + ECD_03209 0.79 -0.4
3,348,059 + ECD_03209 0.79 -3.5
3,348,060 - ECD_03209 0.79 -2.4
3,348,060 - ECD_03209 0.79 -0.2
3,348,060 - ECD_03209 0.79 -0.6
3,348,069 + ECD_03209 0.80 +1.0
3,348,069 + ECD_03209 0.80 -0.4
3,348,072 - ECD_03209 0.80 -0.3
3,348,072 - ECD_03209 0.80 -0.5
3,348,118 - ECD_03209 0.82 -0.9
3,348,128 + ECD_03209 0.83 -3.1
3,348,170 + ECD_03209 0.85 -1.1
3,348,170 + ECD_03209 0.85 -0.3
3,348,170 + ECD_03209 0.85 -1.8
3,348,170 + ECD_03209 0.85 +0.4
3,348,171 - ECD_03209 0.85 -1.8
3,348,171 - ECD_03209 0.85 +0.6
3,348,171 - ECD_03209 0.85 -0.9
3,348,173 + ECD_03209 0.85 -0.2
3,348,174 - ECD_03209 0.85 -1.6
3,348,234 + ECD_03209 0.88 -0.7
3,348,234 + ECD_03209 0.88 +0.9
3,348,235 - ECD_03209 0.88 -0.2
3,348,239 - ECD_03209 0.88 -1.4
3,348,362 + -0.2
3,348,379 + -0.5
3,348,380 - -0.0
3,348,493 - +0.9
3,348,493 - +0.5
3,348,502 + -0.8
3,348,558 + +0.2
3,348,559 - -1.8
3,348,685 - ECD_03210 0.10 -1.3
3,348,706 + ECD_03210 0.12 -0.8
3,348,734 - ECD_03210 0.14 -0.5
3,348,734 - ECD_03210 0.14 +0.1
3,348,786 - ECD_03210 0.18 +0.5
3,348,789 + ECD_03210 0.19 -3.1
3,348,789 + ECD_03210 0.19 -1.7
3,348,790 - ECD_03210 0.19 -0.8
3,348,797 - ECD_03210 0.19 +0.9
3,348,920 + ECD_03210 0.29 -0.6
3,349,060 + ECD_03210 0.41 -1.2
3,349,060 + ECD_03210 0.41 -1.9
3,349,061 - ECD_03210 0.41 -1.0
3,349,061 - ECD_03210 0.41 +0.2
3,349,061 - ECD_03210 0.41 -1.6
3,349,061 - ECD_03210 0.41 -0.1
3,349,061 - ECD_03210 0.41 +0.3
3,349,380 - ECD_03210 0.67 -1.3
3,349,400 + ECD_03210 0.69 -0.7
3,349,400 + ECD_03210 0.69 +0.7
3,349,401 - ECD_03210 0.69 -1.7
3,349,434 - ECD_03210 0.71 -2.3
3,349,449 - ECD_03210 0.73 +0.6
3,349,470 - ECD_03210 0.74 -0.2
3,349,554 - ECD_03210 0.81 -0.0
3,349,651 + ECD_03210 0.89 -1.3
3,349,652 - ECD_03210 0.89 -1.1
3,349,652 - ECD_03210 0.89 +0.6
3,349,703 + -1.3
3,349,704 - +0.1
3,349,721 - -0.0
3,349,721 - -0.5
3,349,798 + -0.5
3,349,798 + -0.3
3,349,799 - +0.3
3,349,799 - +0.4
3,349,799 - -0.0
3,349,799 - +1.0
3,349,821 - +0.1
3,349,834 - -0.9
3,349,917 + -2.7
3,350,021 - ECD_03211 0.27 +0.5
3,350,052 - ECD_03211 0.33 +0.5
3,350,064 + ECD_03211 0.35 -0.2
3,350,103 + ECD_03211 0.42 +1.0
3,350,103 + ECD_03211 0.42 +0.4
3,350,268 + ECD_03211 0.71 -0.3
3,350,269 - ECD_03211 0.71 -0.7
3,350,269 - ECD_03211 0.71 -2.9
3,350,409 - -1.4
3,350,409 - +0.3
3,350,409 - -0.2
3,350,409 - +0.1
3,350,412 + -0.0
3,350,413 - -2.0
3,350,413 - -1.3
3,350,413 - +0.3
3,350,416 + -0.8
3,350,416 + -2.0
3,350,416 + -0.3
3,350,417 - -0.3
3,350,417 - +0.1
3,350,417 - -1.5
3,350,418 + +0.2
3,350,418 + +0.2
3,350,419 - +1.2
3,350,459 - +0.6
3,350,463 + +0.3
3,350,498 - -0.3
3,350,498 - -2.0
3,350,501 + -3.0
3,350,502 - -0.1
3,350,683 - ECD_03212 0.37 -0.2
3,350,685 + ECD_03212 0.37 +0.4

Or see this region's nucleotide sequence