Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02700 and ECD_02701 overlap by 4 nucleotides ECD_02701 and ECD_02702 are separated by 39 nucleotides ECD_02702 and ECD_02703 are separated by 475 nucleotides
ECD_02700: ECD_02700 - xanthine dehydrogenase, FAD-binding subunit, at 2,833,476 to 2,834,354
_02700
ECD_02701: ECD_02701 - xanthine dehydrogenase, Fe-S binding subunit, at 2,834,351 to 2,834,830
_02701
ECD_02702: ECD_02702 - putative sigma-54-interacting transcriptional activator, at 2,834,870 to 2,836,648
_02702
ECD_02703: ECD_02703 - putative carbamoyltransferase, at 2,837,124 to 2,838,314
_02703
Position (kb)
2834
2835
2836
2837 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2833.920 kb on - strand, within ECD_02700 at 2834.028 kb on - strand, within ECD_02700 at 2834.028 kb on - strand, within ECD_02700 at 2834.031 kb on + strand, within ECD_02700 at 2834.031 kb on + strand, within ECD_02700 at 2834.054 kb on + strand, within ECD_02700 at 2834.055 kb on - strand, within ECD_02700 at 2834.114 kb on - strand, within ECD_02700 at 2834.114 kb on - strand, within ECD_02700 at 2834.191 kb on + strand, within ECD_02700 at 2834.192 kb on - strand, within ECD_02700 at 2834.192 kb on - strand, within ECD_02700 at 2834.213 kb on + strand, within ECD_02700 at 2834.214 kb on - strand, within ECD_02700 at 2834.214 kb on - strand, within ECD_02700 at 2834.371 kb on + strand at 2834.463 kb on + strand, within ECD_02701 at 2834.463 kb on + strand, within ECD_02701 at 2834.463 kb on + strand, within ECD_02701 at 2834.464 kb on - strand, within ECD_02701 at 2834.464 kb on - strand, within ECD_02701 at 2834.464 kb on - strand, within ECD_02701 at 2834.506 kb on + strand, within ECD_02701 at 2834.533 kb on - strand, within ECD_02701 at 2834.533 kb on - strand, within ECD_02701 at 2834.544 kb on + strand, within ECD_02701 at 2834.544 kb on + strand, within ECD_02701 at 2834.544 kb on + strand, within ECD_02701 at 2834.545 kb on - strand, within ECD_02701 at 2834.545 kb on - strand, within ECD_02701 at 2834.545 kb on - strand, within ECD_02701 at 2834.545 kb on - strand, within ECD_02701 at 2834.545 kb on - strand, within ECD_02701 at 2834.545 kb on - strand, within ECD_02701 at 2834.546 kb on + strand, within ECD_02701 at 2834.546 kb on + strand, within ECD_02701 at 2834.546 kb on + strand, within ECD_02701 at 2834.546 kb on + strand, within ECD_02701 at 2834.546 kb on + strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.547 kb on - strand, within ECD_02701 at 2834.683 kb on + strand, within ECD_02701 at 2834.797 kb on - strand at 2834.797 kb on - strand at 2834.800 kb on + strand at 2834.801 kb on - strand at 2834.828 kb on + strand at 2834.872 kb on - strand at 2834.945 kb on + strand at 2834.960 kb on - strand at 2834.960 kb on - strand at 2834.960 kb on - strand at 2835.059 kb on + strand, within ECD_02702 at 2835.059 kb on + strand, within ECD_02702 at 2835.059 kb on + strand, within ECD_02702 at 2835.059 kb on + strand, within ECD_02702 at 2835.059 kb on + strand, within ECD_02702 at 2835.059 kb on + strand, within ECD_02702 at 2835.060 kb on - strand, within ECD_02702 at 2835.060 kb on - strand, within ECD_02702 at 2835.060 kb on - strand, within ECD_02702 at 2835.060 kb on - strand, within ECD_02702 at 2835.060 kb on - strand, within ECD_02702 at 2835.060 kb on - strand, within ECD_02702 at 2835.060 kb on - strand, within ECD_02702 at 2835.060 kb on - strand, within ECD_02702 at 2835.108 kb on - strand, within ECD_02702 at 2835.108 kb on - strand, within ECD_02702 at 2835.122 kb on - strand, within ECD_02702 at 2835.153 kb on + strand, within ECD_02702 at 2835.280 kb on - strand, within ECD_02702 at 2835.291 kb on - strand, within ECD_02702 at 2835.291 kb on - strand, within ECD_02702 at 2835.291 kb on - strand, within ECD_02702 at 2835.299 kb on - strand, within ECD_02702 at 2835.346 kb on + strand, within ECD_02702 at 2835.346 kb on + strand, within ECD_02702 at 2835.346 kb on + strand, within ECD_02702 at 2835.347 kb on - strand, within ECD_02702 at 2835.347 kb on - strand, within ECD_02702 at 2835.347 kb on - strand, within ECD_02702 at 2835.410 kb on - strand, within ECD_02702 at 2835.440 kb on + strand, within ECD_02702 at 2835.441 kb on - strand, within ECD_02702 at 2835.441 kb on - strand, within ECD_02702 at 2835.441 kb on - strand, within ECD_02702 at 2835.512 kb on + strand, within ECD_02702 at 2835.513 kb on - strand, within ECD_02702 at 2835.520 kb on + strand, within ECD_02702 at 2835.521 kb on - strand, within ECD_02702 at 2835.521 kb on - strand, within ECD_02702 at 2835.521 kb on - strand, within ECD_02702 at 2835.527 kb on + strand, within ECD_02702 at 2835.602 kb on - strand, within ECD_02702 at 2835.614 kb on - strand, within ECD_02702 at 2835.618 kb on + strand, within ECD_02702 at 2835.618 kb on + strand, within ECD_02702 at 2835.685 kb on + strand, within ECD_02702 at 2835.685 kb on + strand, within ECD_02702 at 2835.707 kb on - strand, within ECD_02702 at 2835.707 kb on - strand, within ECD_02702 at 2835.870 kb on - strand, within ECD_02702 at 2835.989 kb on - strand, within ECD_02702 at 2836.055 kb on - strand, within ECD_02702 at 2836.127 kb on + strand, within ECD_02702 at 2836.231 kb on + strand, within ECD_02702 at 2836.231 kb on + strand, within ECD_02702 at 2836.384 kb on + strand, within ECD_02702 at 2836.634 kb on - strand at 2836.637 kb on - strand at 2836.649 kb on - strand at 2836.667 kb on + strand at 2836.720 kb on + strand at 2836.721 kb on - strand at 2837.043 kb on + strand at 2837.045 kb on + strand at 2837.045 kb on + strand at 2837.045 kb on + strand at 2837.045 kb on + strand at 2837.045 kb on + strand at 2837.045 kb on + strand at 2837.046 kb on - strand at 2837.087 kb on + strand at 2837.236 kb on + strand at 2837.237 kb on - strand at 2837.301 kb on - strand, within ECD_02703 at 2837.308 kb on + strand, within ECD_02703 at 2837.309 kb on - strand, within ECD_02703 at 2837.355 kb on + strand, within ECD_02703 at 2837.355 kb on + strand, within ECD_02703 at 2837.355 kb on + strand, within ECD_02703 at 2837.355 kb on + strand, within ECD_02703 at 2837.355 kb on + strand, within ECD_02703 at 2837.369 kb on + strand, within ECD_02703 at 2837.453 kb on + strand, within ECD_02703 at 2837.453 kb on + strand, within ECD_02703 at 2837.453 kb on + strand, within ECD_02703 at 2837.478 kb on - strand, within ECD_02703 at 2837.495 kb on + strand, within ECD_02703 at 2837.495 kb on + strand, within ECD_02703 at 2837.495 kb on + strand, within ECD_02703 at 2837.495 kb on + strand, within ECD_02703 at 2837.495 kb on + strand, within ECD_02703 at 2837.495 kb on + strand, within ECD_02703 at 2837.495 kb on + strand, within ECD_02703 at 2837.496 kb on - strand, within ECD_02703 at 2837.496 kb on - strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.499 kb on + strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.500 kb on - strand, within ECD_02703 at 2837.520 kb on + strand, within ECD_02703 at 2837.520 kb on + strand, within ECD_02703 at 2837.520 kb on + strand, within ECD_02703 at 2837.520 kb on + strand, within ECD_02703 at 2837.520 kb on + strand, within ECD_02703 at 2837.520 kb on + strand, within ECD_02703 at 2837.520 kb on + strand, within ECD_02703 at 2837.521 kb on - strand, within ECD_02703 at 2837.521 kb on - strand, within ECD_02703 at 2837.521 kb on - strand, within ECD_02703 at 2837.522 kb on + strand, within ECD_02703 at 2837.522 kb on + strand, within ECD_02703 at 2837.522 kb on + strand, within ECD_02703 at 2837.522 kb on + strand, within ECD_02703 at 2837.523 kb on - strand, within ECD_02703 at 2837.523 kb on - strand, within ECD_02703 at 2837.556 kb on + strand, within ECD_02703 at 2837.569 kb on + strand, within ECD_02703 at 2837.569 kb on + strand, within ECD_02703 at 2837.569 kb on + strand, within ECD_02703 at 2837.569 kb on + strand, within ECD_02703 at 2837.570 kb on - strand, within ECD_02703 at 2837.570 kb on - strand, within ECD_02703 at 2837.609 kb on + strand, within ECD_02703
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 2,833,920 - ECD_02700 0.51 -0.4 2,834,028 - ECD_02700 0.63 -1.8 2,834,028 - ECD_02700 0.63 +0.3 2,834,031 + ECD_02700 0.63 +1.0 2,834,031 + ECD_02700 0.63 +1.1 2,834,054 + ECD_02700 0.66 -2.3 2,834,055 - ECD_02700 0.66 +0.8 2,834,114 - ECD_02700 0.73 -0.1 2,834,114 - ECD_02700 0.73 -1.3 2,834,191 + ECD_02700 0.81 -0.5 2,834,192 - ECD_02700 0.81 -0.7 2,834,192 - ECD_02700 0.81 -2.4 2,834,213 + ECD_02700 0.84 +1.3 2,834,214 - ECD_02700 0.84 +0.4 2,834,214 - ECD_02700 0.84 +0.6 2,834,371 + -1.2 2,834,463 + ECD_02701 0.23 -0.2 2,834,463 + ECD_02701 0.23 +1.0 2,834,463 + ECD_02701 0.23 +0.5 2,834,464 - ECD_02701 0.24 -1.7 2,834,464 - ECD_02701 0.24 -1.7 2,834,464 - ECD_02701 0.24 -1.4 2,834,506 + ECD_02701 0.32 +1.0 2,834,533 - ECD_02701 0.38 -2.4 2,834,533 - ECD_02701 0.38 +0.1 2,834,544 + ECD_02701 0.40 +0.8 2,834,544 + ECD_02701 0.40 -0.1 2,834,544 + ECD_02701 0.40 +0.7 2,834,545 - ECD_02701 0.40 -0.9 2,834,545 - ECD_02701 0.40 -0.1 2,834,545 - ECD_02701 0.40 +1.0 2,834,545 - ECD_02701 0.40 -2.2 2,834,545 - ECD_02701 0.40 -0.7 2,834,545 - ECD_02701 0.40 +2.2 2,834,546 + ECD_02701 0.41 -1.1 2,834,546 + ECD_02701 0.41 +2.0 2,834,546 + ECD_02701 0.41 +1.1 2,834,546 + ECD_02701 0.41 +0.2 2,834,546 + ECD_02701 0.41 +0.8 2,834,547 - ECD_02701 0.41 +1.2 2,834,547 - ECD_02701 0.41 -2.1 2,834,547 - ECD_02701 0.41 -2.0 2,834,547 - ECD_02701 0.41 -1.5 2,834,547 - ECD_02701 0.41 +0.5 2,834,547 - ECD_02701 0.41 -1.6 2,834,547 - ECD_02701 0.41 -0.3 2,834,547 - ECD_02701 0.41 +1.8 2,834,547 - ECD_02701 0.41 +0.5 2,834,547 - ECD_02701 0.41 +0.3 2,834,683 + ECD_02701 0.69 -1.0 2,834,797 - +1.2 2,834,797 - +1.8 2,834,800 + -1.5 2,834,801 - +0.6 2,834,828 + +1.3 2,834,872 - +0.4 2,834,945 + +0.0 2,834,960 - +0.0 2,834,960 - +0.5 2,834,960 - +0.5 2,835,059 + ECD_02702 0.11 -0.5 2,835,059 + ECD_02702 0.11 -0.7 2,835,059 + ECD_02702 0.11 +0.1 2,835,059 + ECD_02702 0.11 -0.7 2,835,059 + ECD_02702 0.11 -0.9 2,835,059 + ECD_02702 0.11 +0.3 2,835,060 - ECD_02702 0.11 -0.3 2,835,060 - ECD_02702 0.11 +0.3 2,835,060 - ECD_02702 0.11 +0.3 2,835,060 - ECD_02702 0.11 +0.9 2,835,060 - ECD_02702 0.11 -0.0 2,835,060 - ECD_02702 0.11 +0.9 2,835,060 - ECD_02702 0.11 -1.2 2,835,060 - ECD_02702 0.11 -1.4 2,835,108 - ECD_02702 0.13 +0.5 2,835,108 - ECD_02702 0.13 +1.2 2,835,122 - ECD_02702 0.14 -0.9 2,835,153 + ECD_02702 0.16 -2.0 2,835,280 - ECD_02702 0.23 +0.6 2,835,291 - ECD_02702 0.24 -1.0 2,835,291 - ECD_02702 0.24 -1.1 2,835,291 - ECD_02702 0.24 +0.6 2,835,299 - ECD_02702 0.24 +0.1 2,835,346 + ECD_02702 0.27 -0.7 2,835,346 + ECD_02702 0.27 -2.1 2,835,346 + ECD_02702 0.27 -0.6 2,835,347 - ECD_02702 0.27 -1.3 2,835,347 - ECD_02702 0.27 -0.5 2,835,347 - ECD_02702 0.27 +0.3 2,835,410 - ECD_02702 0.30 -1.0 2,835,440 + ECD_02702 0.32 +1.7 2,835,441 - ECD_02702 0.32 +0.8 2,835,441 - ECD_02702 0.32 -1.3 2,835,441 - ECD_02702 0.32 -0.1 2,835,512 + ECD_02702 0.36 -0.4 2,835,513 - ECD_02702 0.36 +1.0 2,835,520 + ECD_02702 0.37 +0.9 2,835,521 - ECD_02702 0.37 -2.0 2,835,521 - ECD_02702 0.37 +1.2 2,835,521 - ECD_02702 0.37 +0.1 2,835,527 + ECD_02702 0.37 -2.1 2,835,602 - ECD_02702 0.41 -0.7 2,835,614 - ECD_02702 0.42 -0.2 2,835,618 + ECD_02702 0.42 -1.2 2,835,618 + ECD_02702 0.42 -0.3 2,835,685 + ECD_02702 0.46 +0.1 2,835,685 + ECD_02702 0.46 +1.4 2,835,707 - ECD_02702 0.47 -0.7 2,835,707 - ECD_02702 0.47 -2.7 2,835,870 - ECD_02702 0.56 +0.6 2,835,989 - ECD_02702 0.63 -1.4 2,836,055 - ECD_02702 0.67 +0.3 2,836,127 + ECD_02702 0.71 +0.1 2,836,231 + ECD_02702 0.77 -1.3 2,836,231 + ECD_02702 0.77 -1.6 2,836,384 + ECD_02702 0.85 +0.0 2,836,634 - +0.0 2,836,637 - +0.4 2,836,649 - -1.9 2,836,667 + -2.7 2,836,720 + -1.2 2,836,721 - -0.2 2,837,043 + -0.7 2,837,045 + -1.3 2,837,045 + +0.7 2,837,045 + +1.1 2,837,045 + +0.9 2,837,045 + +0.2 2,837,045 + -1.1 2,837,046 - -2.2 2,837,087 + -0.1 2,837,236 + -0.7 2,837,237 - +0.3 2,837,301 - ECD_02703 0.15 -0.7 2,837,308 + ECD_02703 0.15 -0.9 2,837,309 - ECD_02703 0.16 -3.0 2,837,355 + ECD_02703 0.19 +0.6 2,837,355 + ECD_02703 0.19 +0.4 2,837,355 + ECD_02703 0.19 -0.1 2,837,355 + ECD_02703 0.19 +1.2 2,837,355 + ECD_02703 0.19 -1.9 2,837,369 + ECD_02703 0.21 +1.6 2,837,453 + ECD_02703 0.28 +0.6 2,837,453 + ECD_02703 0.28 -2.3 2,837,453 + ECD_02703 0.28 +1.1 2,837,478 - ECD_02703 0.30 +0.6 2,837,495 + ECD_02703 0.31 +1.3 2,837,495 + ECD_02703 0.31 +1.8 2,837,495 + ECD_02703 0.31 -0.7 2,837,495 + ECD_02703 0.31 +0.3 2,837,495 + ECD_02703 0.31 +1.8 2,837,495 + ECD_02703 0.31 +1.5 2,837,495 + ECD_02703 0.31 -0.6 2,837,496 - ECD_02703 0.31 +1.8 2,837,496 - ECD_02703 0.31 +0.8 2,837,499 + ECD_02703 0.31 +0.9 2,837,499 + ECD_02703 0.31 -1.1 2,837,499 + ECD_02703 0.31 +2.0 2,837,499 + ECD_02703 0.31 +0.5 2,837,499 + ECD_02703 0.31 -0.5 2,837,499 + ECD_02703 0.31 +0.2 2,837,499 + ECD_02703 0.31 -0.5 2,837,499 + ECD_02703 0.31 +0.2 2,837,499 + ECD_02703 0.31 +1.3 2,837,499 + ECD_02703 0.31 +0.5 2,837,499 + ECD_02703 0.31 +1.0 2,837,499 + ECD_02703 0.31 +1.0 2,837,499 + ECD_02703 0.31 -1.1 2,837,499 + ECD_02703 0.31 -1.1 2,837,499 + ECD_02703 0.31 +0.1 2,837,500 - ECD_02703 0.32 +0.9 2,837,500 - ECD_02703 0.32 -1.0 2,837,500 - ECD_02703 0.32 -0.7 2,837,500 - ECD_02703 0.32 -0.3 2,837,500 - ECD_02703 0.32 -0.1 2,837,500 - ECD_02703 0.32 -0.1 2,837,500 - ECD_02703 0.32 -0.3 2,837,500 - ECD_02703 0.32 +1.0 2,837,500 - ECD_02703 0.32 -0.4 2,837,500 - ECD_02703 0.32 -1.7 2,837,520 + ECD_02703 0.33 -1.0 2,837,520 + ECD_02703 0.33 -1.8 2,837,520 + ECD_02703 0.33 -1.3 2,837,520 + ECD_02703 0.33 +0.3 2,837,520 + ECD_02703 0.33 +0.7 2,837,520 + ECD_02703 0.33 +0.4 2,837,520 + ECD_02703 0.33 -1.3 2,837,521 - ECD_02703 0.33 -3.4 2,837,521 - ECD_02703 0.33 +0.7 2,837,521 - ECD_02703 0.33 +0.0 2,837,522 + ECD_02703 0.33 +1.1 2,837,522 + ECD_02703 0.33 +1.7 2,837,522 + ECD_02703 0.33 +0.5 2,837,522 + ECD_02703 0.33 +0.2 2,837,523 - ECD_02703 0.34 -1.6 2,837,523 - ECD_02703 0.34 -1.3 2,837,556 + ECD_02703 0.36 +1.0 2,837,569 + ECD_02703 0.37 +1.9 2,837,569 + ECD_02703 0.37 +0.5 2,837,569 + ECD_02703 0.37 -1.2 2,837,569 + ECD_02703 0.37 -0.4 2,837,570 - ECD_02703 0.37 +1.1 2,837,570 - ECD_02703 0.37 +1.2 2,837,609 + ECD_02703 0.41 -0.2
Or see this region's nucleotide sequence