Strain Fitness in Escherichia coli BL21 around ECD_02702

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02700 and ECD_02701 overlap by 4 nucleotidesECD_02701 and ECD_02702 are separated by 39 nucleotidesECD_02702 and ECD_02703 are separated by 475 nucleotides ECD_02700: ECD_02700 - xanthine dehydrogenase, FAD-binding subunit, at 2,833,476 to 2,834,354 _02700 ECD_02701: ECD_02701 - xanthine dehydrogenase, Fe-S binding subunit, at 2,834,351 to 2,834,830 _02701 ECD_02702: ECD_02702 - putative sigma-54-interacting transcriptional activator, at 2,834,870 to 2,836,648 _02702 ECD_02703: ECD_02703 - putative carbamoyltransferase, at 2,837,124 to 2,838,314 _02703 Position (kb) 2834 2835 2836 2837Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2833.920 kb on - strand, within ECD_02700at 2834.028 kb on - strand, within ECD_02700at 2834.028 kb on - strand, within ECD_02700at 2834.031 kb on + strand, within ECD_02700at 2834.031 kb on + strand, within ECD_02700at 2834.054 kb on + strand, within ECD_02700at 2834.055 kb on - strand, within ECD_02700at 2834.114 kb on - strand, within ECD_02700at 2834.114 kb on - strand, within ECD_02700at 2834.191 kb on + strand, within ECD_02700at 2834.192 kb on - strand, within ECD_02700at 2834.192 kb on - strand, within ECD_02700at 2834.213 kb on + strand, within ECD_02700at 2834.214 kb on - strand, within ECD_02700at 2834.214 kb on - strand, within ECD_02700at 2834.371 kb on + strandat 2834.463 kb on + strand, within ECD_02701at 2834.463 kb on + strand, within ECD_02701at 2834.463 kb on + strand, within ECD_02701at 2834.464 kb on - strand, within ECD_02701at 2834.464 kb on - strand, within ECD_02701at 2834.464 kb on - strand, within ECD_02701at 2834.506 kb on + strand, within ECD_02701at 2834.533 kb on - strand, within ECD_02701at 2834.533 kb on - strand, within ECD_02701at 2834.544 kb on + strand, within ECD_02701at 2834.544 kb on + strand, within ECD_02701at 2834.544 kb on + strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.545 kb on - strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.546 kb on + strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.547 kb on - strand, within ECD_02701at 2834.683 kb on + strand, within ECD_02701at 2834.797 kb on - strandat 2834.797 kb on - strandat 2834.800 kb on + strandat 2834.801 kb on - strandat 2834.828 kb on + strandat 2834.872 kb on - strandat 2834.945 kb on + strandat 2834.960 kb on - strandat 2834.960 kb on - strandat 2834.960 kb on - strandat 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.059 kb on + strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.060 kb on - strand, within ECD_02702at 2835.108 kb on - strand, within ECD_02702at 2835.108 kb on - strand, within ECD_02702at 2835.122 kb on - strand, within ECD_02702at 2835.153 kb on + strand, within ECD_02702at 2835.280 kb on - strand, within ECD_02702at 2835.291 kb on - strand, within ECD_02702at 2835.291 kb on - strand, within ECD_02702at 2835.291 kb on - strand, within ECD_02702at 2835.299 kb on - strand, within ECD_02702at 2835.346 kb on + strand, within ECD_02702at 2835.346 kb on + strand, within ECD_02702at 2835.346 kb on + strand, within ECD_02702at 2835.347 kb on - strand, within ECD_02702at 2835.347 kb on - strand, within ECD_02702at 2835.347 kb on - strand, within ECD_02702at 2835.410 kb on - strand, within ECD_02702at 2835.440 kb on + strand, within ECD_02702at 2835.441 kb on - strand, within ECD_02702at 2835.441 kb on - strand, within ECD_02702at 2835.441 kb on - strand, within ECD_02702at 2835.512 kb on + strand, within ECD_02702at 2835.513 kb on - strand, within ECD_02702at 2835.520 kb on + strand, within ECD_02702at 2835.521 kb on - strand, within ECD_02702at 2835.521 kb on - strand, within ECD_02702at 2835.521 kb on - strand, within ECD_02702at 2835.527 kb on + strand, within ECD_02702at 2835.602 kb on - strand, within ECD_02702at 2835.614 kb on - strand, within ECD_02702at 2835.618 kb on + strand, within ECD_02702at 2835.618 kb on + strand, within ECD_02702at 2835.685 kb on + strand, within ECD_02702at 2835.685 kb on + strand, within ECD_02702at 2835.707 kb on - strand, within ECD_02702at 2835.707 kb on - strand, within ECD_02702at 2835.870 kb on - strand, within ECD_02702at 2835.989 kb on - strand, within ECD_02702at 2836.055 kb on - strand, within ECD_02702at 2836.127 kb on + strand, within ECD_02702at 2836.231 kb on + strand, within ECD_02702at 2836.231 kb on + strand, within ECD_02702at 2836.384 kb on + strand, within ECD_02702at 2836.634 kb on - strandat 2836.637 kb on - strandat 2836.649 kb on - strandat 2836.667 kb on + strandat 2836.720 kb on + strandat 2836.721 kb on - strandat 2837.043 kb on + strandat 2837.045 kb on + strandat 2837.045 kb on + strandat 2837.045 kb on + strandat 2837.045 kb on + strandat 2837.045 kb on + strandat 2837.045 kb on + strandat 2837.046 kb on - strandat 2837.087 kb on + strandat 2837.236 kb on + strandat 2837.237 kb on - strandat 2837.301 kb on - strand, within ECD_02703at 2837.308 kb on + strand, within ECD_02703at 2837.309 kb on - strand, within ECD_02703at 2837.355 kb on + strand, within ECD_02703at 2837.355 kb on + strand, within ECD_02703at 2837.355 kb on + strand, within ECD_02703at 2837.355 kb on + strand, within ECD_02703at 2837.355 kb on + strand, within ECD_02703at 2837.369 kb on + strand, within ECD_02703at 2837.453 kb on + strand, within ECD_02703at 2837.453 kb on + strand, within ECD_02703at 2837.453 kb on + strand, within ECD_02703at 2837.478 kb on - strand, within ECD_02703at 2837.495 kb on + strand, within ECD_02703at 2837.495 kb on + strand, within ECD_02703at 2837.495 kb on + strand, within ECD_02703at 2837.495 kb on + strand, within ECD_02703at 2837.495 kb on + strand, within ECD_02703at 2837.495 kb on + strand, within ECD_02703at 2837.495 kb on + strand, within ECD_02703at 2837.496 kb on - strand, within ECD_02703at 2837.496 kb on - strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.499 kb on + strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.500 kb on - strand, within ECD_02703at 2837.520 kb on + strand, within ECD_02703at 2837.520 kb on + strand, within ECD_02703at 2837.520 kb on + strand, within ECD_02703at 2837.520 kb on + strand, within ECD_02703at 2837.520 kb on + strand, within ECD_02703at 2837.520 kb on + strand, within ECD_02703at 2837.520 kb on + strand, within ECD_02703at 2837.521 kb on - strand, within ECD_02703at 2837.521 kb on - strand, within ECD_02703at 2837.521 kb on - strand, within ECD_02703at 2837.522 kb on + strand, within ECD_02703at 2837.522 kb on + strand, within ECD_02703at 2837.522 kb on + strand, within ECD_02703at 2837.522 kb on + strand, within ECD_02703at 2837.523 kb on - strand, within ECD_02703at 2837.523 kb on - strand, within ECD_02703at 2837.556 kb on + strand, within ECD_02703at 2837.569 kb on + strand, within ECD_02703at 2837.569 kb on + strand, within ECD_02703at 2837.569 kb on + strand, within ECD_02703at 2837.569 kb on + strand, within ECD_02703at 2837.570 kb on - strand, within ECD_02703at 2837.570 kb on - strand, within ECD_02703at 2837.609 kb on + strand, within ECD_02703

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,833,920 - ECD_02700 0.51 -0.4
2,834,028 - ECD_02700 0.63 -1.8
2,834,028 - ECD_02700 0.63 +0.3
2,834,031 + ECD_02700 0.63 +1.0
2,834,031 + ECD_02700 0.63 +1.1
2,834,054 + ECD_02700 0.66 -2.3
2,834,055 - ECD_02700 0.66 +0.8
2,834,114 - ECD_02700 0.73 -0.1
2,834,114 - ECD_02700 0.73 -1.3
2,834,191 + ECD_02700 0.81 -0.5
2,834,192 - ECD_02700 0.81 -0.7
2,834,192 - ECD_02700 0.81 -2.4
2,834,213 + ECD_02700 0.84 +1.3
2,834,214 - ECD_02700 0.84 +0.4
2,834,214 - ECD_02700 0.84 +0.6
2,834,371 + -1.2
2,834,463 + ECD_02701 0.23 -0.2
2,834,463 + ECD_02701 0.23 +1.0
2,834,463 + ECD_02701 0.23 +0.5
2,834,464 - ECD_02701 0.24 -1.7
2,834,464 - ECD_02701 0.24 -1.7
2,834,464 - ECD_02701 0.24 -1.4
2,834,506 + ECD_02701 0.32 +1.0
2,834,533 - ECD_02701 0.38 -2.4
2,834,533 - ECD_02701 0.38 +0.1
2,834,544 + ECD_02701 0.40 +0.8
2,834,544 + ECD_02701 0.40 -0.1
2,834,544 + ECD_02701 0.40 +0.7
2,834,545 - ECD_02701 0.40 -0.9
2,834,545 - ECD_02701 0.40 -0.1
2,834,545 - ECD_02701 0.40 +1.0
2,834,545 - ECD_02701 0.40 -2.2
2,834,545 - ECD_02701 0.40 -0.7
2,834,545 - ECD_02701 0.40 +2.2
2,834,546 + ECD_02701 0.41 -1.1
2,834,546 + ECD_02701 0.41 +2.0
2,834,546 + ECD_02701 0.41 +1.1
2,834,546 + ECD_02701 0.41 +0.2
2,834,546 + ECD_02701 0.41 +0.8
2,834,547 - ECD_02701 0.41 +1.2
2,834,547 - ECD_02701 0.41 -2.1
2,834,547 - ECD_02701 0.41 -2.0
2,834,547 - ECD_02701 0.41 -1.5
2,834,547 - ECD_02701 0.41 +0.5
2,834,547 - ECD_02701 0.41 -1.6
2,834,547 - ECD_02701 0.41 -0.3
2,834,547 - ECD_02701 0.41 +1.8
2,834,547 - ECD_02701 0.41 +0.5
2,834,547 - ECD_02701 0.41 +0.3
2,834,683 + ECD_02701 0.69 -1.0
2,834,797 - +1.2
2,834,797 - +1.8
2,834,800 + -1.5
2,834,801 - +0.6
2,834,828 + +1.3
2,834,872 - +0.4
2,834,945 + +0.0
2,834,960 - +0.0
2,834,960 - +0.5
2,834,960 - +0.5
2,835,059 + ECD_02702 0.11 -0.5
2,835,059 + ECD_02702 0.11 -0.7
2,835,059 + ECD_02702 0.11 +0.1
2,835,059 + ECD_02702 0.11 -0.7
2,835,059 + ECD_02702 0.11 -0.9
2,835,059 + ECD_02702 0.11 +0.3
2,835,060 - ECD_02702 0.11 -0.3
2,835,060 - ECD_02702 0.11 +0.3
2,835,060 - ECD_02702 0.11 +0.3
2,835,060 - ECD_02702 0.11 +0.9
2,835,060 - ECD_02702 0.11 -0.0
2,835,060 - ECD_02702 0.11 +0.9
2,835,060 - ECD_02702 0.11 -1.2
2,835,060 - ECD_02702 0.11 -1.4
2,835,108 - ECD_02702 0.13 +0.5
2,835,108 - ECD_02702 0.13 +1.2
2,835,122 - ECD_02702 0.14 -0.9
2,835,153 + ECD_02702 0.16 -2.0
2,835,280 - ECD_02702 0.23 +0.6
2,835,291 - ECD_02702 0.24 -1.0
2,835,291 - ECD_02702 0.24 -1.1
2,835,291 - ECD_02702 0.24 +0.6
2,835,299 - ECD_02702 0.24 +0.1
2,835,346 + ECD_02702 0.27 -0.7
2,835,346 + ECD_02702 0.27 -2.1
2,835,346 + ECD_02702 0.27 -0.6
2,835,347 - ECD_02702 0.27 -1.3
2,835,347 - ECD_02702 0.27 -0.5
2,835,347 - ECD_02702 0.27 +0.3
2,835,410 - ECD_02702 0.30 -1.0
2,835,440 + ECD_02702 0.32 +1.7
2,835,441 - ECD_02702 0.32 +0.8
2,835,441 - ECD_02702 0.32 -1.3
2,835,441 - ECD_02702 0.32 -0.1
2,835,512 + ECD_02702 0.36 -0.4
2,835,513 - ECD_02702 0.36 +1.0
2,835,520 + ECD_02702 0.37 +0.9
2,835,521 - ECD_02702 0.37 -2.0
2,835,521 - ECD_02702 0.37 +1.2
2,835,521 - ECD_02702 0.37 +0.1
2,835,527 + ECD_02702 0.37 -2.1
2,835,602 - ECD_02702 0.41 -0.7
2,835,614 - ECD_02702 0.42 -0.2
2,835,618 + ECD_02702 0.42 -1.2
2,835,618 + ECD_02702 0.42 -0.3
2,835,685 + ECD_02702 0.46 +0.1
2,835,685 + ECD_02702 0.46 +1.4
2,835,707 - ECD_02702 0.47 -0.7
2,835,707 - ECD_02702 0.47 -2.7
2,835,870 - ECD_02702 0.56 +0.6
2,835,989 - ECD_02702 0.63 -1.4
2,836,055 - ECD_02702 0.67 +0.3
2,836,127 + ECD_02702 0.71 +0.1
2,836,231 + ECD_02702 0.77 -1.3
2,836,231 + ECD_02702 0.77 -1.6
2,836,384 + ECD_02702 0.85 +0.0
2,836,634 - +0.0
2,836,637 - +0.4
2,836,649 - -1.9
2,836,667 + -2.7
2,836,720 + -1.2
2,836,721 - -0.2
2,837,043 + -0.7
2,837,045 + -1.3
2,837,045 + +0.7
2,837,045 + +1.1
2,837,045 + +0.9
2,837,045 + +0.2
2,837,045 + -1.1
2,837,046 - -2.2
2,837,087 + -0.1
2,837,236 + -0.7
2,837,237 - +0.3
2,837,301 - ECD_02703 0.15 -0.7
2,837,308 + ECD_02703 0.15 -0.9
2,837,309 - ECD_02703 0.16 -3.0
2,837,355 + ECD_02703 0.19 +0.6
2,837,355 + ECD_02703 0.19 +0.4
2,837,355 + ECD_02703 0.19 -0.1
2,837,355 + ECD_02703 0.19 +1.2
2,837,355 + ECD_02703 0.19 -1.9
2,837,369 + ECD_02703 0.21 +1.6
2,837,453 + ECD_02703 0.28 +0.6
2,837,453 + ECD_02703 0.28 -2.3
2,837,453 + ECD_02703 0.28 +1.1
2,837,478 - ECD_02703 0.30 +0.6
2,837,495 + ECD_02703 0.31 +1.3
2,837,495 + ECD_02703 0.31 +1.8
2,837,495 + ECD_02703 0.31 -0.7
2,837,495 + ECD_02703 0.31 +0.3
2,837,495 + ECD_02703 0.31 +1.8
2,837,495 + ECD_02703 0.31 +1.5
2,837,495 + ECD_02703 0.31 -0.6
2,837,496 - ECD_02703 0.31 +1.8
2,837,496 - ECD_02703 0.31 +0.8
2,837,499 + ECD_02703 0.31 +0.9
2,837,499 + ECD_02703 0.31 -1.1
2,837,499 + ECD_02703 0.31 +2.0
2,837,499 + ECD_02703 0.31 +0.5
2,837,499 + ECD_02703 0.31 -0.5
2,837,499 + ECD_02703 0.31 +0.2
2,837,499 + ECD_02703 0.31 -0.5
2,837,499 + ECD_02703 0.31 +0.2
2,837,499 + ECD_02703 0.31 +1.3
2,837,499 + ECD_02703 0.31 +0.5
2,837,499 + ECD_02703 0.31 +1.0
2,837,499 + ECD_02703 0.31 +1.0
2,837,499 + ECD_02703 0.31 -1.1
2,837,499 + ECD_02703 0.31 -1.1
2,837,499 + ECD_02703 0.31 +0.1
2,837,500 - ECD_02703 0.32 +0.9
2,837,500 - ECD_02703 0.32 -1.0
2,837,500 - ECD_02703 0.32 -0.7
2,837,500 - ECD_02703 0.32 -0.3
2,837,500 - ECD_02703 0.32 -0.1
2,837,500 - ECD_02703 0.32 -0.1
2,837,500 - ECD_02703 0.32 -0.3
2,837,500 - ECD_02703 0.32 +1.0
2,837,500 - ECD_02703 0.32 -0.4
2,837,500 - ECD_02703 0.32 -1.7
2,837,520 + ECD_02703 0.33 -1.0
2,837,520 + ECD_02703 0.33 -1.8
2,837,520 + ECD_02703 0.33 -1.3
2,837,520 + ECD_02703 0.33 +0.3
2,837,520 + ECD_02703 0.33 +0.7
2,837,520 + ECD_02703 0.33 +0.4
2,837,520 + ECD_02703 0.33 -1.3
2,837,521 - ECD_02703 0.33 -3.4
2,837,521 - ECD_02703 0.33 +0.7
2,837,521 - ECD_02703 0.33 +0.0
2,837,522 + ECD_02703 0.33 +1.1
2,837,522 + ECD_02703 0.33 +1.7
2,837,522 + ECD_02703 0.33 +0.5
2,837,522 + ECD_02703 0.33 +0.2
2,837,523 - ECD_02703 0.34 -1.6
2,837,523 - ECD_02703 0.34 -1.3
2,837,556 + ECD_02703 0.36 +1.0
2,837,569 + ECD_02703 0.37 +1.9
2,837,569 + ECD_02703 0.37 +0.5
2,837,569 + ECD_02703 0.37 -1.2
2,837,569 + ECD_02703 0.37 -0.4
2,837,570 - ECD_02703 0.37 +1.1
2,837,570 - ECD_02703 0.37 +1.2
2,837,609 + ECD_02703 0.41 -0.2

Or see this region's nucleotide sequence