Strain Fitness in Escherichia coli BL21 around ECD_02490

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02489 and ECD_02490 are separated by 10 nucleotidesECD_02490 and ECD_02491 are separated by 209 nucleotidesECD_02491 and ECD_02492 are separated by 149 nucleotides ECD_02489: ECD_02489 - fused chorismate mutase T/prephenate dehydrogenase, at 2,605,462 to 2,606,583 _02489 ECD_02490: ECD_02490 - 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible, at 2,606,594 to 2,607,664 _02490 ECD_02491: ECD_02491 - lipoprotein, at 2,607,874 to 2,608,239 _02491 ECD_02492: ECD_02492 - putative periplasmic inhibitor of YfiN activity, at 2,608,389 to 2,608,907 _02492 Position (kb) 2606 2607 2608Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 2605.621 kb on - strand, within ECD_02489at 2605.621 kb on - strand, within ECD_02489at 2605.621 kb on - strand, within ECD_02489at 2605.622 kb on + strand, within ECD_02489at 2605.622 kb on + strand, within ECD_02489at 2605.622 kb on + strand, within ECD_02489at 2605.622 kb on + strand, within ECD_02489at 2605.622 kb on + strand, within ECD_02489at 2605.622 kb on + strand, within ECD_02489at 2605.623 kb on - strand, within ECD_02489at 2605.623 kb on - strand, within ECD_02489at 2605.623 kb on - strand, within ECD_02489at 2605.623 kb on - strand, within ECD_02489at 2605.623 kb on - strand, within ECD_02489at 2605.623 kb on - strand, within ECD_02489at 2605.626 kb on - strand, within ECD_02489at 2605.648 kb on - strand, within ECD_02489at 2605.662 kb on + strand, within ECD_02489at 2605.662 kb on + strand, within ECD_02489at 2605.662 kb on + strand, within ECD_02489at 2605.662 kb on + strand, within ECD_02489at 2605.662 kb on + strand, within ECD_02489at 2605.662 kb on + strand, within ECD_02489at 2605.662 kb on + strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.663 kb on - strand, within ECD_02489at 2605.665 kb on + strand, within ECD_02489at 2605.666 kb on - strand, within ECD_02489at 2605.731 kb on - strand, within ECD_02489at 2605.797 kb on - strand, within ECD_02489at 2605.867 kb on - strand, within ECD_02489at 2605.867 kb on - strand, within ECD_02489at 2605.916 kb on + strand, within ECD_02489at 2605.916 kb on + strand, within ECD_02489at 2605.917 kb on - strand, within ECD_02489at 2605.917 kb on - strand, within ECD_02489at 2605.917 kb on - strand, within ECD_02489at 2605.917 kb on - strand, within ECD_02489at 2605.929 kb on + strand, within ECD_02489at 2605.929 kb on + strand, within ECD_02489at 2605.929 kb on + strand, within ECD_02489at 2605.930 kb on - strand, within ECD_02489at 2606.039 kb on - strand, within ECD_02489at 2606.076 kb on + strand, within ECD_02489at 2606.077 kb on - strand, within ECD_02489at 2606.077 kb on - strand, within ECD_02489at 2606.077 kb on - strand, within ECD_02489at 2606.140 kb on - strand, within ECD_02489at 2606.140 kb on - strand, within ECD_02489at 2606.170 kb on - strand, within ECD_02489at 2606.311 kb on - strand, within ECD_02489at 2606.337 kb on - strand, within ECD_02489at 2606.387 kb on - strand, within ECD_02489at 2606.427 kb on + strand, within ECD_02489at 2606.427 kb on + strand, within ECD_02489at 2606.427 kb on + strand, within ECD_02489at 2606.428 kb on - strand, within ECD_02489at 2606.428 kb on - strand, within ECD_02489at 2606.428 kb on - strand, within ECD_02489at 2606.428 kb on - strand, within ECD_02489at 2606.428 kb on - strand, within ECD_02489at 2606.428 kb on - strand, within ECD_02489at 2606.428 kb on - strand, within ECD_02489at 2606.428 kb on - strand, within ECD_02489at 2606.428 kb on - strand, within ECD_02489at 2606.451 kb on - strand, within ECD_02489at 2606.451 kb on - strand, within ECD_02489at 2606.454 kb on + strand, within ECD_02489at 2606.455 kb on - strand, within ECD_02489at 2606.455 kb on - strand, within ECD_02489at 2606.519 kb on - strandat 2606.519 kb on - strandat 2606.583 kb on + strandat 2606.584 kb on - strandat 2606.587 kb on - strandat 2606.587 kb on - strandat 2606.596 kb on - strandat 2606.671 kb on + strandat 2606.671 kb on + strandat 2606.671 kb on + strandat 2606.672 kb on - strandat 2606.672 kb on - strandat 2606.672 kb on - strandat 2606.694 kb on - strandat 2606.694 kb on - strandat 2606.752 kb on + strand, within ECD_02490at 2606.753 kb on - strand, within ECD_02490at 2606.753 kb on - strand, within ECD_02490at 2606.871 kb on - strand, within ECD_02490at 2606.938 kb on + strand, within ECD_02490at 2606.941 kb on - strand, within ECD_02490at 2606.941 kb on - strand, within ECD_02490at 2606.941 kb on - strand, within ECD_02490at 2606.999 kb on + strand, within ECD_02490at 2607.000 kb on - strand, within ECD_02490at 2607.000 kb on - strand, within ECD_02490at 2607.071 kb on - strand, within ECD_02490at 2607.167 kb on - strand, within ECD_02490at 2607.191 kb on - strand, within ECD_02490at 2607.208 kb on - strand, within ECD_02490at 2607.208 kb on - strand, within ECD_02490at 2607.218 kb on - strand, within ECD_02490at 2607.306 kb on - strand, within ECD_02490at 2607.306 kb on - strand, within ECD_02490at 2607.338 kb on - strand, within ECD_02490at 2607.342 kb on - strand, within ECD_02490at 2607.399 kb on + strand, within ECD_02490at 2607.447 kb on + strand, within ECD_02490at 2607.447 kb on + strand, within ECD_02490at 2607.491 kb on + strand, within ECD_02490at 2607.491 kb on + strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.492 kb on - strand, within ECD_02490at 2607.495 kb on - strand, within ECD_02490at 2607.527 kb on - strand, within ECD_02490at 2607.527 kb on - strand, within ECD_02490at 2607.634 kb on + strandat 2607.634 kb on + strandat 2607.634 kb on + strandat 2607.635 kb on - strandat 2607.635 kb on - strandat 2607.635 kb on - strandat 2607.635 kb on - strandat 2607.635 kb on - strandat 2607.638 kb on + strandat 2607.639 kb on - strandat 2607.639 kb on - strandat 2607.639 kb on - strandat 2607.639 kb on - strandat 2607.639 kb on - strandat 2607.680 kb on + strandat 2607.681 kb on - strandat 2607.721 kb on - strandat 2607.786 kb on + strandat 2607.787 kb on - strandat 2607.937 kb on + strand, within ECD_02491at 2607.937 kb on + strand, within ECD_02491at 2607.938 kb on - strand, within ECD_02491at 2607.939 kb on + strand, within ECD_02491at 2607.939 kb on + strand, within ECD_02491at 2607.939 kb on + strand, within ECD_02491at 2607.940 kb on - strand, within ECD_02491at 2607.940 kb on - strand, within ECD_02491at 2607.940 kb on - strand, within ECD_02491at 2607.974 kb on - strand, within ECD_02491at 2607.974 kb on - strand, within ECD_02491at 2607.974 kb on - strand, within ECD_02491at 2607.974 kb on - strand, within ECD_02491at 2608.013 kb on + strand, within ECD_02491at 2608.013 kb on + strand, within ECD_02491at 2608.059 kb on - strand, within ECD_02491at 2608.059 kb on - strand, within ECD_02491at 2608.059 kb on - strand, within ECD_02491at 2608.059 kb on - strand, within ECD_02491at 2608.060 kb on + strand, within ECD_02491at 2608.061 kb on - strand, within ECD_02491at 2608.061 kb on - strand, within ECD_02491at 2608.061 kb on - strand, within ECD_02491at 2608.114 kb on + strand, within ECD_02491at 2608.115 kb on - strand, within ECD_02491at 2608.191 kb on - strand, within ECD_02491at 2608.330 kb on + strandat 2608.414 kb on + strandat 2608.447 kb on + strand, within ECD_02492at 2608.487 kb on + strand, within ECD_02492at 2608.487 kb on + strand, within ECD_02492at 2608.487 kb on + strand, within ECD_02492at 2608.488 kb on - strand, within ECD_02492at 2608.488 kb on - strand, within ECD_02492at 2608.488 kb on - strand, within ECD_02492at 2608.488 kb on - strand, within ECD_02492at 2608.512 kb on + strand, within ECD_02492at 2608.512 kb on + strand, within ECD_02492at 2608.549 kb on + strand, within ECD_02492at 2608.549 kb on + strand, within ECD_02492at 2608.549 kb on + strand, within ECD_02492at 2608.550 kb on - strand, within ECD_02492at 2608.553 kb on + strand, within ECD_02492at 2608.553 kb on + strand, within ECD_02492at 2608.574 kb on + strand, within ECD_02492at 2608.585 kb on + strand, within ECD_02492

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,605,621 - ECD_02489 0.14 -1.1
2,605,621 - ECD_02489 0.14 +0.9
2,605,621 - ECD_02489 0.14 +1.6
2,605,622 + ECD_02489 0.14 +1.1
2,605,622 + ECD_02489 0.14 -1.1
2,605,622 + ECD_02489 0.14 -2.5
2,605,622 + ECD_02489 0.14 -1.3
2,605,622 + ECD_02489 0.14 -0.7
2,605,622 + ECD_02489 0.14 +0.9
2,605,623 - ECD_02489 0.14 +1.5
2,605,623 - ECD_02489 0.14 +1.0
2,605,623 - ECD_02489 0.14 -1.5
2,605,623 - ECD_02489 0.14 +0.2
2,605,623 - ECD_02489 0.14 +1.2
2,605,623 - ECD_02489 0.14 -0.4
2,605,626 - ECD_02489 0.15 -0.6
2,605,648 - ECD_02489 0.17 +1.5
2,605,662 + ECD_02489 0.18 -2.1
2,605,662 + ECD_02489 0.18 -0.6
2,605,662 + ECD_02489 0.18 -1.8
2,605,662 + ECD_02489 0.18 -1.1
2,605,662 + ECD_02489 0.18 -0.5
2,605,662 + ECD_02489 0.18 -0.8
2,605,662 + ECD_02489 0.18 -1.2
2,605,663 - ECD_02489 0.18 +0.2
2,605,663 - ECD_02489 0.18 -0.8
2,605,663 - ECD_02489 0.18 +1.1
2,605,663 - ECD_02489 0.18 -1.8
2,605,663 - ECD_02489 0.18 +1.0
2,605,663 - ECD_02489 0.18 -0.2
2,605,663 - ECD_02489 0.18 -1.6
2,605,663 - ECD_02489 0.18 -1.8
2,605,663 - ECD_02489 0.18 -1.5
2,605,663 - ECD_02489 0.18 +0.5
2,605,663 - ECD_02489 0.18 -2.1
2,605,663 - ECD_02489 0.18 +0.9
2,605,663 - ECD_02489 0.18 -0.0
2,605,665 + ECD_02489 0.18 -1.0
2,605,666 - ECD_02489 0.18 +0.2
2,605,731 - ECD_02489 0.24 -0.6
2,605,797 - ECD_02489 0.30 -1.0
2,605,867 - ECD_02489 0.36 +0.1
2,605,867 - ECD_02489 0.36 +0.7
2,605,916 + ECD_02489 0.40 -0.0
2,605,916 + ECD_02489 0.40 +2.9
2,605,917 - ECD_02489 0.41 +1.3
2,605,917 - ECD_02489 0.41 +0.1
2,605,917 - ECD_02489 0.41 +1.2
2,605,917 - ECD_02489 0.41 +1.2
2,605,929 + ECD_02489 0.42 -0.2
2,605,929 + ECD_02489 0.42 -0.7
2,605,929 + ECD_02489 0.42 +0.3
2,605,930 - ECD_02489 0.42 -0.8
2,606,039 - ECD_02489 0.51 -1.6
2,606,076 + ECD_02489 0.55 -0.2
2,606,077 - ECD_02489 0.55 +1.2
2,606,077 - ECD_02489 0.55 +0.1
2,606,077 - ECD_02489 0.55 +0.4
2,606,140 - ECD_02489 0.60 -2.4
2,606,140 - ECD_02489 0.60 +0.3
2,606,170 - ECD_02489 0.63 -1.1
2,606,311 - ECD_02489 0.76 -0.3
2,606,337 - ECD_02489 0.78 +0.8
2,606,387 - ECD_02489 0.82 -0.2
2,606,427 + ECD_02489 0.86 +0.4
2,606,427 + ECD_02489 0.86 +1.2
2,606,427 + ECD_02489 0.86 -0.7
2,606,428 - ECD_02489 0.86 -0.0
2,606,428 - ECD_02489 0.86 -0.3
2,606,428 - ECD_02489 0.86 +0.1
2,606,428 - ECD_02489 0.86 +0.2
2,606,428 - ECD_02489 0.86 +0.2
2,606,428 - ECD_02489 0.86 +2.2
2,606,428 - ECD_02489 0.86 +0.6
2,606,428 - ECD_02489 0.86 +0.4
2,606,428 - ECD_02489 0.86 -2.0
2,606,451 - ECD_02489 0.88 +0.9
2,606,451 - ECD_02489 0.88 +2.1
2,606,454 + ECD_02489 0.88 +0.3
2,606,455 - ECD_02489 0.89 -0.8
2,606,455 - ECD_02489 0.89 -0.7
2,606,519 - +0.2
2,606,519 - +0.9
2,606,583 + +1.2
2,606,584 - +0.1
2,606,587 - -0.1
2,606,587 - +0.4
2,606,596 - -2.3
2,606,671 + +0.3
2,606,671 + -1.7
2,606,671 + -1.9
2,606,672 - -0.2
2,606,672 - -0.8
2,606,672 - +1.2
2,606,694 - +0.1
2,606,694 - -1.6
2,606,752 + ECD_02490 0.15 -0.5
2,606,753 - ECD_02490 0.15 -1.4
2,606,753 - ECD_02490 0.15 -3.2
2,606,871 - ECD_02490 0.26 -0.4
2,606,938 + ECD_02490 0.32 +2.2
2,606,941 - ECD_02490 0.32 -0.9
2,606,941 - ECD_02490 0.32 +0.0
2,606,941 - ECD_02490 0.32 -1.6
2,606,999 + ECD_02490 0.38 -0.1
2,607,000 - ECD_02490 0.38 -2.3
2,607,000 - ECD_02490 0.38 +0.2
2,607,071 - ECD_02490 0.45 +0.1
2,607,167 - ECD_02490 0.54 +0.2
2,607,191 - ECD_02490 0.56 +0.6
2,607,208 - ECD_02490 0.57 -1.9
2,607,208 - ECD_02490 0.57 +0.4
2,607,218 - ECD_02490 0.58 +0.1
2,607,306 - ECD_02490 0.66 -0.2
2,607,306 - ECD_02490 0.66 +0.5
2,607,338 - ECD_02490 0.69 -0.6
2,607,342 - ECD_02490 0.70 -0.7
2,607,399 + ECD_02490 0.75 +1.2
2,607,447 + ECD_02490 0.80 -0.8
2,607,447 + ECD_02490 0.80 -3.4
2,607,491 + ECD_02490 0.84 -1.9
2,607,491 + ECD_02490 0.84 -0.0
2,607,492 - ECD_02490 0.84 -1.0
2,607,492 - ECD_02490 0.84 -2.8
2,607,492 - ECD_02490 0.84 -1.7
2,607,492 - ECD_02490 0.84 +0.2
2,607,492 - ECD_02490 0.84 +0.7
2,607,492 - ECD_02490 0.84 -1.9
2,607,492 - ECD_02490 0.84 -1.0
2,607,492 - ECD_02490 0.84 -0.7
2,607,495 - ECD_02490 0.84 +0.3
2,607,527 - ECD_02490 0.87 +2.5
2,607,527 - ECD_02490 0.87 +0.7
2,607,634 + -0.6
2,607,634 + -0.2
2,607,634 + -1.8
2,607,635 - -0.7
2,607,635 - -0.9
2,607,635 - +0.1
2,607,635 - +0.1
2,607,635 - -0.5
2,607,638 + +1.8
2,607,639 - +0.3
2,607,639 - -1.5
2,607,639 - -0.0
2,607,639 - -0.4
2,607,639 - +0.5
2,607,680 + -1.5
2,607,681 - +0.2
2,607,721 - +0.7
2,607,786 + -0.4
2,607,787 - -0.2
2,607,937 + ECD_02491 0.17 +1.6
2,607,937 + ECD_02491 0.17 -2.1
2,607,938 - ECD_02491 0.17 +0.2
2,607,939 + ECD_02491 0.18 -0.7
2,607,939 + ECD_02491 0.18 -0.6
2,607,939 + ECD_02491 0.18 +0.3
2,607,940 - ECD_02491 0.18 +0.3
2,607,940 - ECD_02491 0.18 +0.0
2,607,940 - ECD_02491 0.18 -2.5
2,607,974 - ECD_02491 0.27 +0.6
2,607,974 - ECD_02491 0.27 -1.3
2,607,974 - ECD_02491 0.27 +2.2
2,607,974 - ECD_02491 0.27 +0.6
2,608,013 + ECD_02491 0.38 -0.6
2,608,013 + ECD_02491 0.38 -0.8
2,608,059 - ECD_02491 0.51 +1.7
2,608,059 - ECD_02491 0.51 +0.9
2,608,059 - ECD_02491 0.51 -0.7
2,608,059 - ECD_02491 0.51 +1.0
2,608,060 + ECD_02491 0.51 -0.2
2,608,061 - ECD_02491 0.51 +0.7
2,608,061 - ECD_02491 0.51 +0.5
2,608,061 - ECD_02491 0.51 -0.5
2,608,114 + ECD_02491 0.66 -0.9
2,608,115 - ECD_02491 0.66 -1.2
2,608,191 - ECD_02491 0.87 +0.4
2,608,330 + -1.8
2,608,414 + +2.4
2,608,447 + ECD_02492 0.11 -0.6
2,608,487 + ECD_02492 0.19 -0.6
2,608,487 + ECD_02492 0.19 +0.9
2,608,487 + ECD_02492 0.19 -1.5
2,608,488 - ECD_02492 0.19 +0.1
2,608,488 - ECD_02492 0.19 -0.5
2,608,488 - ECD_02492 0.19 -1.7
2,608,488 - ECD_02492 0.19 +1.8
2,608,512 + ECD_02492 0.24 -0.3
2,608,512 + ECD_02492 0.24 -2.6
2,608,549 + ECD_02492 0.31 -0.8
2,608,549 + ECD_02492 0.31 -0.1
2,608,549 + ECD_02492 0.31 -1.0
2,608,550 - ECD_02492 0.31 -0.9
2,608,553 + ECD_02492 0.32 -0.8
2,608,553 + ECD_02492 0.32 +0.8
2,608,574 + ECD_02492 0.36 -1.1
2,608,585 + ECD_02492 0.38 -2.7

Or see this region's nucleotide sequence