Strain Fitness in Escherichia coli BL21 around ECD_02299

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02298 and ECD_02299 are separated by 203 nucleotidesECD_02299 and ECD_02300 are separated by 114 nucleotidesECD_02300 and ECD_02301 are separated by 140 nucleotides ECD_02298: ECD_02298 - glucokinase, at 2,386,347 to 2,387,312 _02298 ECD_02299: ECD_02299 - putative ion channel protein, at 2,387,516 to 2,388,772 _02299 ECD_02300: ECD_02300 - DUF2502 family putative periplasmic protein, at 2,388,887 to 2,389,213 _02300 ECD_02301: ECD_02301 - manganese/divalent cation transporter, at 2,389,354 to 2,390,592 _02301 Position (kb) 2387 2388 2389Strain fitness (log2 ratio) -2 -1 0 1 2at 2386.593 kb on - strand, within ECD_02298at 2386.662 kb on - strand, within ECD_02298at 2386.717 kb on + strand, within ECD_02298at 2386.932 kb on - strand, within ECD_02298at 2387.133 kb on - strand, within ECD_02298at 2387.157 kb on - strand, within ECD_02298at 2387.157 kb on - strand, within ECD_02298at 2387.157 kb on - strand, within ECD_02298at 2387.157 kb on - strand, within ECD_02298at 2387.171 kb on - strand, within ECD_02298at 2387.216 kb on - strandat 2387.296 kb on - strandat 2387.303 kb on - strandat 2387.303 kb on - strandat 2387.375 kb on - strandat 2387.485 kb on + strandat 2387.486 kb on - strandat 2387.486 kb on - strandat 2387.701 kb on - strand, within ECD_02299at 2387.824 kb on + strand, within ECD_02299at 2387.835 kb on + strand, within ECD_02299at 2387.836 kb on - strand, within ECD_02299at 2387.960 kb on - strand, within ECD_02299at 2387.960 kb on - strand, within ECD_02299at 2387.998 kb on + strand, within ECD_02299at 2387.999 kb on - strand, within ECD_02299at 2388.022 kb on - strand, within ECD_02299at 2388.417 kb on - strand, within ECD_02299at 2388.437 kb on - strand, within ECD_02299at 2388.705 kb on + strandat 2388.706 kb on - strandat 2388.708 kb on + strandat 2388.709 kb on - strandat 2388.963 kb on + strand, within ECD_02300at 2389.103 kb on + strand, within ECD_02300at 2389.133 kb on + strand, within ECD_02300at 2389.263 kb on - strandat 2389.355 kb on + strandat 2389.356 kb on - strandat 2389.390 kb on - strandat 2389.564 kb on + strand, within ECD_02301at 2389.767 kb on - strand, within ECD_02301

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,386,593 - ECD_02298 0.25 +0.1
2,386,662 - ECD_02298 0.33 +0.1
2,386,717 + ECD_02298 0.38 -0.3
2,386,932 - ECD_02298 0.61 +1.1
2,387,133 - ECD_02298 0.81 -1.7
2,387,157 - ECD_02298 0.84 -2.7
2,387,157 - ECD_02298 0.84 +1.2
2,387,157 - ECD_02298 0.84 +0.1
2,387,157 - ECD_02298 0.84 -2.0
2,387,171 - ECD_02298 0.85 +0.2
2,387,216 - +2.7
2,387,296 - -0.1
2,387,303 - -0.6
2,387,303 - +0.3
2,387,375 - -1.5
2,387,485 + -1.7
2,387,486 - +0.1
2,387,486 - +0.4
2,387,701 - ECD_02299 0.15 +1.0
2,387,824 + ECD_02299 0.25 +0.0
2,387,835 + ECD_02299 0.25 -0.3
2,387,836 - ECD_02299 0.25 +2.1
2,387,960 - ECD_02299 0.35 -0.2
2,387,960 - ECD_02299 0.35 -2.3
2,387,998 + ECD_02299 0.38 +1.8
2,387,999 - ECD_02299 0.38 -0.6
2,388,022 - ECD_02299 0.40 +1.0
2,388,417 - ECD_02299 0.72 -0.2
2,388,437 - ECD_02299 0.73 +1.0
2,388,705 + +0.5
2,388,706 - -0.6
2,388,708 + +1.3
2,388,709 - -1.5
2,388,963 + ECD_02300 0.23 -0.4
2,389,103 + ECD_02300 0.66 -0.8
2,389,133 + ECD_02300 0.75 -0.4
2,389,263 - +0.0
2,389,355 + +0.7
2,389,356 - +0.0
2,389,390 - +0.4
2,389,564 + ECD_02301 0.17 -0.6
2,389,767 - ECD_02301 0.33 -0.5

Or see this region's nucleotide sequence