Strain Fitness in Escherichia coli BL21 around ECD_02241

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02240 and ECD_02241 are separated by 69 nucleotidesECD_02241 and ECD_02242 are separated by 155 nucleotidesECD_02242 and ECD_02243 are separated by 82 nucleotides ECD_02240: ECD_02240 - bifunctional folylpolyglutamate synthase/ dihydrofolate synthase, at 2,318,927 to 2,320,195 _02240 ECD_02241: ECD_02241 - acetyl-CoA carboxylase, beta (carboxyltransferase) subunit, at 2,320,265 to 2,321,179 _02241 ECD_02242: ECD_02242 - DedA family inner membrane protein, at 2,321,335 to 2,321,994 _02242 ECD_02243: ECD_02243 - tRNA pseudouridine(38-40) synthase, at 2,322,077 to 2,322,889 _02243 Position (kb) 2320 2321 2322Strain fitness (log2 ratio) -2 -1 0 1 2at 2320.264 kb on - strandat 2320.305 kb on - strandat 2321.410 kb on - strand, within ECD_02242at 2321.431 kb on - strand, within ECD_02242at 2321.518 kb on - strand, within ECD_02242at 2321.520 kb on - strand, within ECD_02242at 2321.779 kb on - strand, within ECD_02242at 2321.779 kb on - strand, within ECD_02242at 2322.012 kb on - strandat 2322.032 kb on + strandat 2322.033 kb on - strandat 2322.070 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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2,320,264 - -1.6
2,320,305 - -1.4
2,321,410 - ECD_02242 0.11 +2.1
2,321,431 - ECD_02242 0.15 -0.7
2,321,518 - ECD_02242 0.28 +2.7
2,321,520 - ECD_02242 0.28 +0.7
2,321,779 - ECD_02242 0.67 -0.3
2,321,779 - ECD_02242 0.67 +1.2
2,322,012 - -1.5
2,322,032 + -0.0
2,322,033 - -1.8
2,322,070 - -0.7

Or see this region's nucleotide sequence