Strain Fitness in Escherichia coli BL21 around ECD_01866

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01865 and ECD_01866 overlap by 26 nucleotidesECD_01866 and ECD_01867 are separated by 166 nucleotides ECD_01865: ECD_01865 - trehalose-6-phosphate synthase, at 1,925,330 to 1,926,754 _01865 ECD_01866: ECD_01866 - trehalose-6-phosphate phosphatase, biosynthetic, at 1,926,729 to 1,927,529 _01866 ECD_01867: ECD_01867 - L-arabinose ABC transporter permease, at 1,927,696 to 1,928,682 _01867 Position (kb) 1926 1927 1928Strain fitness (log2 ratio) -1 0 1 2 3at 1925.771 kb on + strand, within ECD_01865at 1925.785 kb on + strand, within ECD_01865at 1925.786 kb on - strand, within ECD_01865at 1926.376 kb on + strand, within ECD_01865at 1926.404 kb on + strand, within ECD_01865at 1926.755 kb on - strandat 1927.102 kb on - strand, within ECD_01866at 1927.247 kb on + strand, within ECD_01866at 1927.248 kb on - strand, within ECD_01866at 1927.248 kb on - strand, within ECD_01866at 1927.395 kb on + strand, within ECD_01866at 1927.410 kb on - strand, within ECD_01866at 1927.588 kb on + strandat 1927.588 kb on + strandat 1927.588 kb on + strandat 1927.589 kb on - strandat 1927.589 kb on - strandat 1927.589 kb on - strandat 1927.589 kb on - strandat 1927.589 kb on - strandat 1927.589 kb on - strandat 1927.773 kb on - strandat 1927.773 kb on - strandat 1928.088 kb on + strand, within ECD_01867at 1928.296 kb on + strand, within ECD_01867

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,925,771 + ECD_01865 0.31 +3.1
1,925,785 + ECD_01865 0.32 -0.3
1,925,786 - ECD_01865 0.32 +0.4
1,926,376 + ECD_01865 0.73 -0.4
1,926,404 + ECD_01865 0.75 -0.4
1,926,755 - -0.7
1,927,102 - ECD_01866 0.47 +1.6
1,927,247 + ECD_01866 0.65 +0.1
1,927,248 - ECD_01866 0.65 +1.9
1,927,248 - ECD_01866 0.65 -0.5
1,927,395 + ECD_01866 0.83 -1.2
1,927,410 - ECD_01866 0.85 -0.8
1,927,588 + -0.9
1,927,588 + -0.7
1,927,588 + +0.7
1,927,589 - -1.1
1,927,589 - +0.3
1,927,589 - -0.9
1,927,589 - -0.8
1,927,589 - +2.8
1,927,589 - -0.9
1,927,773 - -0.2
1,927,773 - +0.9
1,928,088 + ECD_01867 0.40 -0.8
1,928,296 + ECD_01867 0.61 +1.4

Or see this region's nucleotide sequence