Strain Fitness in Escherichia coli BL21 around ECD_01739

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01738 and ECD_01739 are separated by 117 nucleotidesECD_01739 and ECD_01740 are separated by 136 nucleotides ECD_01738: ECD_01738 - putative MFS sugar transporter, membrane protein, at 1,796,997 to 1,798,355 _01738 ECD_01739: ECD_01739 - putative DNA-binding transcriptional regulator, at 1,798,473 to 1,799,231 _01739 ECD_01740: ECD_01740 - methylglyoxal reductase, NADH-dependent, at 1,799,368 to 1,800,348 _01740 Position (kb) 1798 1799 1800Strain fitness (log2 ratio) -1 0 1at 1798.602 kb on - strand, within ECD_01739at 1798.764 kb on - strand, within ECD_01739at 1799.003 kb on - strand, within ECD_01739at 1799.495 kb on - strand, within ECD_01740

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,798,602 - ECD_01739 0.17 +0.4
1,798,764 - ECD_01739 0.38 -0.5
1,799,003 - ECD_01739 0.70 +1.7
1,799,495 - ECD_01740 0.13 -0.6

Or see this region's nucleotide sequence