Strain Fitness in Escherichia coli BL21 around ECD_01698

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01696 and ECD_01697 are separated by 162 nucleotidesECD_01697 and ECD_01698 are separated by 132 nucleotidesECD_01698 and ECD_01699 are separated by 24 nucleotides ECD_01696: ECD_01696 - 2-deoxyglucose-6-P phosphatase, at 1,753,793 to 1,754,461 _01696 ECD_01697: ECD_01697 - inner membrane protein regulated by LexA, at 1,754,624 to 1,755,214 _01697 ECD_01698: ECD_01698 - putative transporter, at 1,755,347 to 1,756,738 _01698 ECD_01699: ECD_01699 - uncharacterized protein, at 1,756,763 to 1,757,557 _01699 Position (kb) 1755 1756 1757Strain fitness (log2 ratio) -1 0 1 2at 1755.164 kb on - strandat 1755.260 kb on + strandat 1755.260 kb on + strandat 1755.325 kb on + strandat 1755.326 kb on - strandat 1755.328 kb on + strandat 1755.497 kb on + strand, within ECD_01698at 1755.497 kb on + strand, within ECD_01698at 1755.520 kb on + strand, within ECD_01698at 1755.560 kb on + strand, within ECD_01698at 1755.806 kb on + strand, within ECD_01698at 1755.806 kb on + strand, within ECD_01698at 1755.806 kb on + strand, within ECD_01698at 1755.907 kb on + strand, within ECD_01698at 1756.489 kb on + strand, within ECD_01698at 1756.629 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,755,164 - +2.4
1,755,260 + +0.0
1,755,260 + -1.3
1,755,325 + -0.1
1,755,326 - +1.4
1,755,328 + +1.5
1,755,497 + ECD_01698 0.11 +1.2
1,755,497 + ECD_01698 0.11 +2.1
1,755,520 + ECD_01698 0.12 +1.1
1,755,560 + ECD_01698 0.15 +2.0
1,755,806 + ECD_01698 0.33 +1.1
1,755,806 + ECD_01698 0.33 +1.1
1,755,806 + ECD_01698 0.33 -0.3
1,755,907 + ECD_01698 0.40 +0.5
1,756,489 + ECD_01698 0.82 +0.4
1,756,629 + +0.7

Or see this region's nucleotide sequence