Strain Fitness in Escherichia coli BL21 around ECD_01438

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01437 and ECD_01438 are separated by 156 nucleotidesECD_01438 and ECD_01439 are separated by 101 nucleotidesECD_01439 and ECD_01440 are separated by 344 nucleotides ECD_01437: ECD_01437 - malate dehydrogenase, decarboxylating, NAD-requiring; malic enzyme, at 1,509,440 to 1,511,137 _01437 ECD_01438: ECD_01438 - stationary-phase-induced ribosome-associated protein, at 1,511,294 to 1,511,431 _01438 ECD_01439: ECD_01439 - biofilm-dependent modulation protein, at 1,511,533 to 1,511,748 _01439 ECD_01440: ECD_01440 - lipoyl-dependent Cys-based peroxidase, hydroperoxide resistance; salt-shock inducible membrane protein; peroxiredoxin, at 1,512,093 to 1,512,524 _01440 Position (kb) 1511 1512Strain fitness (log2 ratio) -1 0 1at 1510.912 kb on - strand, within ECD_01437at 1512.053 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,510,912 - ECD_01437 0.87 +0.7
1,512,053 + +0.6

Or see this region's nucleotide sequence