Strain Fitness in Escherichia coli BL21 around ECD_01237

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01236 and ECD_01237 are separated by 3 nucleotidesECD_01237 and ECD_01238 overlap by 1 nucleotides ECD_01236: ECD_01236 - indole-3-glycerolphosphate synthetase and N-(5-phosphoribosyl)anthranilate isomerase, at 1,304,019 to 1,305,377 _01236 ECD_01237: ECD_01237 - fused glutamine amidotransferase (component II) of anthranilate synthase/anthranilate phosphoribosyl transferase, at 1,305,381 to 1,306,976 _01237 ECD_01238: ECD_01238 - component I of anthranilate synthase, at 1,306,976 to 1,308,538 _01238 Position (kb) 1305 1306 1307Strain fitness (log2 ratio) -1 0 1 2 3at 1304.409 kb on - strand, within ECD_01236at 1304.546 kb on - strand, within ECD_01236at 1304.564 kb on - strand, within ECD_01236at 1304.724 kb on - strand, within ECD_01236at 1304.724 kb on - strand, within ECD_01236at 1304.973 kb on + strand, within ECD_01236at 1304.973 kb on + strand, within ECD_01236at 1304.974 kb on - strand, within ECD_01236at 1304.993 kb on - strand, within ECD_01236at 1305.039 kb on - strand, within ECD_01236at 1305.383 kb on - strandat 1305.436 kb on - strandat 1305.493 kb on - strandat 1305.650 kb on - strand, within ECD_01237at 1305.943 kb on - strand, within ECD_01237at 1305.943 kb on - strand, within ECD_01237at 1306.112 kb on + strand, within ECD_01237at 1306.165 kb on + strand, within ECD_01237at 1306.396 kb on - strand, within ECD_01237at 1306.527 kb on - strand, within ECD_01237at 1306.779 kb on - strand, within ECD_01237at 1306.857 kb on + strandat 1306.934 kb on - strandat 1306.934 kb on - strandat 1306.938 kb on - strandat 1307.228 kb on + strand, within ECD_01238at 1307.244 kb on - strand, within ECD_01238at 1307.598 kb on + strand, within ECD_01238at 1307.599 kb on - strand, within ECD_01238at 1307.599 kb on - strand, within ECD_01238at 1307.664 kb on + strand, within ECD_01238at 1307.664 kb on + strand, within ECD_01238at 1307.695 kb on - strand, within ECD_01238at 1307.895 kb on - strand, within ECD_01238

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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1,304,409 - ECD_01236 0.29 +1.1
1,304,546 - ECD_01236 0.39 +0.2
1,304,564 - ECD_01236 0.40 +2.0
1,304,724 - ECD_01236 0.52 +1.3
1,304,724 - ECD_01236 0.52 +1.0
1,304,973 + ECD_01236 0.70 -1.0
1,304,973 + ECD_01236 0.70 +0.2
1,304,974 - ECD_01236 0.70 +0.2
1,304,993 - ECD_01236 0.72 -0.3
1,305,039 - ECD_01236 0.75 +1.7
1,305,383 - +0.1
1,305,436 - +1.6
1,305,493 - +0.2
1,305,650 - ECD_01237 0.17 +1.1
1,305,943 - ECD_01237 0.35 +0.3
1,305,943 - ECD_01237 0.35 -0.2
1,306,112 + ECD_01237 0.46 +0.5
1,306,165 + ECD_01237 0.49 +0.4
1,306,396 - ECD_01237 0.64 +1.3
1,306,527 - ECD_01237 0.72 -1.3
1,306,779 - ECD_01237 0.88 -0.2
1,306,857 + -0.2
1,306,934 - +0.9
1,306,934 - +0.8
1,306,938 - +2.4
1,307,228 + ECD_01238 0.16 -1.2
1,307,244 - ECD_01238 0.17 +1.3
1,307,598 + ECD_01238 0.40 -1.6
1,307,599 - ECD_01238 0.40 +0.3
1,307,599 - ECD_01238 0.40 +0.6
1,307,664 + ECD_01238 0.44 +1.0
1,307,664 + ECD_01238 0.44 +1.3
1,307,695 - ECD_01238 0.46 +2.8
1,307,895 - ECD_01238 0.59 +0.0

Or see this region's nucleotide sequence