Experiment: NoPhageControl
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00961 and ECD_00962 are separated by 356 nucleotides ECD_00962 and ECD_00963 are separated by 218 nucleotides ECD_00963 and ECD_00964 overlap by 38 nucleotides
ECD_00961: ECD_00961 - outer membrane protein A (3a, at 1,024,102 to 1,025,142
_00961
ECD_00962: ECD_00962 - SOS cell division inhibitor, at 1,025,499 to 1,026,008
_00962
ECD_00963: ECD_00963 - CRP-S-dependent promoter expression factor, at 1,026,227 to 1,026,856
_00963
ECD_00964: ECD_00964 - putative transporter, FUSC superfamily inner membrane protein, at 1,026,819 to 1,028,972
_00964
Position (kb)
1025
1026
1027 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1024.783 kb on - strand, within ECD_00961 at 1024.800 kb on - strand, within ECD_00961 at 1024.800 kb on - strand, within ECD_00961 at 1024.800 kb on - strand, within ECD_00961 at 1024.800 kb on - strand, within ECD_00961 at 1024.800 kb on - strand, within ECD_00961 at 1024.866 kb on - strand, within ECD_00961 at 1024.866 kb on - strand, within ECD_00961 at 1024.866 kb on - strand, within ECD_00961 at 1024.866 kb on - strand, within ECD_00961 at 1024.866 kb on - strand, within ECD_00961 at 1024.866 kb on - strand, within ECD_00961 at 1024.866 kb on - strand, within ECD_00961 at 1024.893 kb on - strand, within ECD_00961 at 1024.900 kb on - strand, within ECD_00961 at 1024.938 kb on - strand, within ECD_00961 at 1024.938 kb on - strand, within ECD_00961 at 1024.938 kb on - strand, within ECD_00961 at 1024.938 kb on - strand, within ECD_00961 at 1025.058 kb on - strand at 1025.090 kb on - strand at 1025.195 kb on - strand at 1025.235 kb on - strand at 1025.235 kb on - strand at 1025.281 kb on - strand at 1025.295 kb on - strand at 1025.513 kb on + strand at 1025.579 kb on + strand, within ECD_00962 at 1025.580 kb on - strand, within ECD_00962 at 1025.674 kb on + strand, within ECD_00962 at 1025.675 kb on - strand, within ECD_00962 at 1025.675 kb on - strand, within ECD_00962 at 1025.675 kb on - strand, within ECD_00962 at 1025.745 kb on + strand, within ECD_00962 at 1025.745 kb on + strand, within ECD_00962 at 1025.746 kb on - strand, within ECD_00962 at 1025.746 kb on - strand, within ECD_00962 at 1025.746 kb on - strand, within ECD_00962 at 1025.848 kb on - strand, within ECD_00962 at 1025.863 kb on - strand, within ECD_00962 at 1025.863 kb on - strand, within ECD_00962 at 1025.863 kb on - strand, within ECD_00962 at 1025.863 kb on - strand, within ECD_00962 at 1025.913 kb on - strand, within ECD_00962 at 1026.004 kb on + strand at 1026.005 kb on - strand at 1026.005 kb on - strand at 1026.008 kb on + strand at 1026.008 kb on + strand at 1026.008 kb on + strand at 1026.008 kb on + strand at 1026.008 kb on + strand at 1026.008 kb on + strand at 1026.008 kb on + strand at 1026.009 kb on - strand at 1026.045 kb on - strand at 1026.254 kb on + strand at 1026.254 kb on + strand at 1026.408 kb on + strand, within ECD_00963 at 1026.467 kb on + strand, within ECD_00963 at 1026.489 kb on + strand, within ECD_00963 at 1026.598 kb on + strand, within ECD_00963 at 1026.661 kb on + strand, within ECD_00963 at 1026.661 kb on + strand, within ECD_00963 at 1026.663 kb on + strand, within ECD_00963 at 1026.981 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction NoPhageControl remove 1,024,783 - ECD_00961 0.65 +1.6 1,024,800 - ECD_00961 0.67 +1.1 1,024,800 - ECD_00961 0.67 +0.9 1,024,800 - ECD_00961 0.67 +1.5 1,024,800 - ECD_00961 0.67 +0.7 1,024,800 - ECD_00961 0.67 +2.5 1,024,866 - ECD_00961 0.73 +0.8 1,024,866 - ECD_00961 0.73 -0.3 1,024,866 - ECD_00961 0.73 -0.4 1,024,866 - ECD_00961 0.73 +1.4 1,024,866 - ECD_00961 0.73 +2.2 1,024,866 - ECD_00961 0.73 -0.1 1,024,866 - ECD_00961 0.73 +0.0 1,024,893 - ECD_00961 0.76 +1.0 1,024,900 - ECD_00961 0.77 +1.0 1,024,938 - ECD_00961 0.80 -0.3 1,024,938 - ECD_00961 0.80 +1.6 1,024,938 - ECD_00961 0.80 +0.4 1,024,938 - ECD_00961 0.80 +1.6 1,025,058 - +1.6 1,025,090 - +1.9 1,025,195 - +2.1 1,025,235 - +1.7 1,025,235 - +1.5 1,025,281 - +1.4 1,025,295 - -0.2 1,025,513 + +1.3 1,025,579 + ECD_00962 0.16 +2.0 1,025,580 - ECD_00962 0.16 +2.0 1,025,674 + ECD_00962 0.34 +1.7 1,025,675 - ECD_00962 0.35 +2.9 1,025,675 - ECD_00962 0.35 +2.0 1,025,675 - ECD_00962 0.35 +2.0 1,025,745 + ECD_00962 0.48 +1.8 1,025,745 + ECD_00962 0.48 +1.9 1,025,746 - ECD_00962 0.48 +2.3 1,025,746 - ECD_00962 0.48 +0.5 1,025,746 - ECD_00962 0.48 +2.2 1,025,848 - ECD_00962 0.68 +0.8 1,025,863 - ECD_00962 0.71 +1.1 1,025,863 - ECD_00962 0.71 +2.1 1,025,863 - ECD_00962 0.71 +0.7 1,025,863 - ECD_00962 0.71 +1.8 1,025,913 - ECD_00962 0.81 +1.6 1,026,004 + +3.6 1,026,005 - +1.9 1,026,005 - +1.4 1,026,008 + +1.4 1,026,008 + +1.9 1,026,008 + +2.2 1,026,008 + +0.6 1,026,008 + +1.5 1,026,008 + +2.2 1,026,008 + +1.8 1,026,009 - +1.2 1,026,045 - +2.9 1,026,254 + +0.9 1,026,254 + +0.8 1,026,408 + ECD_00963 0.29 -1.0 1,026,467 + ECD_00963 0.38 +1.1 1,026,489 + ECD_00963 0.42 +2.0 1,026,598 + ECD_00963 0.59 +0.7 1,026,661 + ECD_00963 0.69 -0.5 1,026,661 + ECD_00963 0.69 +0.6 1,026,663 + ECD_00963 0.69 -0.8 1,026,981 + +1.2
Or see this region's nucleotide sequence