Strain Fitness in Escherichia coli BL21 around ECD_00914

Experiment: NoPhageControl

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00913 and ECD_00914 are separated by 172 nucleotidesECD_00914 and ECD_00915 are separated by 110 nucleotides ECD_00913: ECD_00913 - putative peptidase-related chaperone, at 965,354 to 966,118 _00913 ECD_00914: ECD_00914 - cytidylate kinase, at 966,291 to 966,974 _00914 ECD_00915: ECD_00915 - 30S ribosomal subunit protein S1, at 967,085 to 968,758 _00915 Position (kb) 966 967Strain fitness (log2 ratio) -2 -1 0 1 2at 965.570 kb on + strand, within ECD_00913at 965.614 kb on + strand, within ECD_00913at 965.615 kb on - strand, within ECD_00913at 965.637 kb on - strand, within ECD_00913at 965.645 kb on + strand, within ECD_00913at 965.645 kb on + strand, within ECD_00913at 965.645 kb on + strand, within ECD_00913at 965.646 kb on - strand, within ECD_00913at 965.647 kb on + strand, within ECD_00913at 965.648 kb on - strand, within ECD_00913at 965.807 kb on + strand, within ECD_00913at 966.241 kb on + strandat 966.267 kb on + strandat 966.267 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction NoPhageControl
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965,570 + ECD_00913 0.28 +0.2
965,614 + ECD_00913 0.34 -2.1
965,615 - ECD_00913 0.34 -1.4
965,637 - ECD_00913 0.37 -0.9
965,645 + ECD_00913 0.38 -1.7
965,645 + ECD_00913 0.38 +2.5
965,645 + ECD_00913 0.38 -1.1
965,646 - ECD_00913 0.38 -0.4
965,647 + ECD_00913 0.38 +2.0
965,648 - ECD_00913 0.38 -2.4
965,807 + ECD_00913 0.59 +1.5
966,241 + +1.2
966,267 + -0.0
966,267 + -1.6

Or see this region's nucleotide sequence